Basic Information

Insect: Priocnemis perturbator
Gene Symbol: -
Assembly: GCA_963942575.1
Location: OZ012643.1:21299113-21301143[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.052 5.2 8.2 0.9 2 23 126 147 125 147 0.93

2 11 0.005 0.49 11.4 3.2 2 23 215 236 214 236 0.90

3 11 0.00026 0.026 15.4 2.7 1 23 362 384 362 384 0.98

4 11 2.2e-06 0.00022 21.9 0.8 1 23 390 412 390 412 0.98

5 11 8.6e-08 8.5e-06 26.4 0.7 1 23 418 440 418 440 0.98

6 11 0.00037 0.036 15.0 1.8 1 23 456 478 456 478 0.97

7 11 2.1e-07 2.1e-05 25.2 3.7 1 23 484 506 484 506 0.98

8 11 1.7e-07 1.6e-05 25.5 4.1 1 23 512 534 512 534 0.98

9 11 1.3e-06 0.00013 22.7 3.0 1 23 540 562 540 562 0.98

10 11 6.1e-05 0.0061 17.4 5.2 1 23 568 590 568 590 0.97

11 11 3.4e-06 0.00034 21.3 2.8 1 23 596 618 596 618 0.99

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.052	5.2	8.2	0.9	2	23	126	147	125	147	0.93
2	11	0.005	0.49	11.4	3.2	2	23	215	236	214	236	0.90
3	11	0.00026	0.026	15.4	2.7	1	23	362	384	362	384	0.98
4	11	2.2e-06	0.00022	21.9	0.8	1	23	390	412	390	412	0.98
5	11	8.6e-08	8.5e-06	26.4	0.7	1	23	418	440	418	440	0.98
6	11	0.00037	0.036	15.0	1.8	1	23	456	478	456	478	0.97
7	11	2.1e-07	2.1e-05	25.2	3.7	1	23	484	506	484	506	0.98
8	11	1.7e-07	1.6e-05	25.5	4.1	1	23	512	534	512	534	0.98
9	11	1.3e-06	0.00013	22.7	3.0	1	23	540	562	540	562	0.98
10	11	6.1e-05	0.0061	17.4	5.2	1	23	568	590	568	590	0.97
11	11	3.4e-06	0.00034	21.3	2.8	1	23	596	618	596	618	0.99

Sequence Information

Coding Sequence: ATGTTTATCGTTACGAAAGAAATCGATAGTGAGAATATCAGTAAACTATGCAGAACTTGCCTAAGAGAGGACGGCGATAAAATGGTTTGTCTCTTTATGGGACCGGCTGGGTCGTCGTTGGCAGCCAAATTAAGATCTCTATCATGCTTAGAGGTCTGGCAAGGGGACGGTTTGCCAGAAAAAATGTGCGACCGCTGTGTTACAAGAGCAGAGTCAGCGTTGTTGTACAGAGAACAATGTAGAGCGGCTGACAGAGCGCTTAGACAGGCAGCAATTAAGGTCTCAGGTCTAACGTCGTACACCACAGTTTCCGGGTGCAGATTGTATCAACAGAATCAGGGATTTGTGCCTGTACAAAACTCCCACAAAACTCTAAAATGCATAGAATGTGGTGCAGTCTTTATGACTTATCAAGAACTGTGCACTCATAGCAGATTGCATTTACCGTTTACCCAGGACAGCATACCTATGCAACATATGCACATTGTTGAGTCTCAGAATCCATATCTGAACTTTGGTCATCTGAATAGCAATTTGGCGACTGAGAACAATGTTCAAAGTGGTCAATTATCGCCGTTAATTAGATCGAGTCTGAGGCAAACAACGACCGAGGAAACTTCGagccgagctgcctgtgctcttcaCTGTTCCTTGTGCAATCACACTTTCACGAATCGGACGCAGCTGATAAGTCACAATATCGCTCACACCTCGGACACCATCGACATGTCCTGCGACAACGAGAATATCGAGATATGCGAGAATTCCAATCAGATACCGCGAAACTTGAGCTTCGAACGGTCCATTCACTCGGTCGACAATCAAATACAGAACTTGTCTTATCCGAGGCCAGCCATAGACGACGGTGACGAGATTCAGAATTTGAGTTTCCCGGAGAATATTGAGCTGGACGGCGTCCAAGAGAGTAGTCCCGAGCGTCTTCAAAACGTTCCGATGACGCAGAAGGACACCATATCAATGACTGATAATTTGAGATTCCCGAAAGAAGATAGACAAATTATGAACGGATATCATTTGCCGGAGAACGACGTTTATAAGGAAGAAGATGGTTCGCAGAAAAAGTATAAGTGCGAGTTGTGCGCGAAGCAATTCAGTCAACGATCGAAATTTTTGACCCATAGATTGTCGCACTCGGGTCAGCGGCCGTTCAAATGTCTCACCTGCGAGAAGGCTTATGCTTCGAAGAGTAAACTAAATGCTCACATGAGATTACACACAAAGACTAACGTGCATCAGTGCACGATCTGCGACAAGGTATTCGCGTATCCGTCTTATCTGGAAGAACACATAAAGACCCATAACAAAGACACCATCGAATCCTCAATTTCCATGCAAAACAAACAATTTGAATGTGCCACGTGTAAAAAACGATTTCGACTAGCAAAAAATTTTAAGGCTCATGAAAAGCTTCATACGGGTAAGGGTCTGTTTCATTGCGAGATTTGCGATAAACGCTTTAGTCAGACTTATAATCTGAAAGTACATCTTCGCACCCACAAAGCTGTAAAGATGCATAAGTGCGAGTATTGCGACAAATGTTTCAGTCAAAAAGGAAATCTCGTAGAGCATTTACGGGTACACACAAAAGTGAAACCGTTCGAGTGTAAATTGTGCGGCAAAAGATTCTCGCAAACGAGTCATTTGAAAAGTCACGAAGCGACGCACAATTCGATCAGACAGCATCAGTGCAGATTGTGtggcaaacgatttaaattagcCAATCACCTAAAGCGTCATCTAAATCTGCACACGGGCTCAAAAGCGTATAAATGCAATCAATGTAATCAAATGTTTTCTCAGGCCTTCAGTTTGTCGAGACACTTGAAACGACACAGCGAATCGCACGCTTAA
Protein Sequence: MFIVTKEIDSENISKLCRTCLREDGDKMVCLFMGPAGSSLAAKLRSLSCLEVWQGDGLPEKMCDRCVTRAESALLYREQCRAADRALRQAAIKVSGLTSYTTVSGCRLYQQNQGFVPVQNSHKTLKCIECGAVFMTYQELCTHSRLHLPFTQDSIPMQHMHIVESQNPYLNFGHLNSNLATENNVQSGQLSPLIRSSLRQTTTEETSSRAACALHCSLCNHTFTNRTQLISHNIAHTSDTIDMSCDNENIEICENSNQIPRNLSFERSIHSVDNQIQNLSYPRPAIDDGDEIQNLSFPENIELDGVQESSPERLQNVPMTQKDTISMTDNLRFPKEDRQIMNGYHLPENDVYKEEDGSQKKYKCELCAKQFSQRSKFLTHRLSHSGQRPFKCLTCEKAYASKSKLNAHMRLHTKTNVHQCTICDKVFAYPSYLEEHIKTHNKDTIESSISMQNKQFECATCKKRFRLAKNFKAHEKLHTGKGLFHCEICDKRFSQTYNLKVHLRTHKAVKMHKCEYCDKCFSQKGNLVEHLRVHTKVKPFECKLCGKRFSQTSHLKSHEATHNSIRQHQCRLCGKRFKLANHLKRHLNLHTGSKAYKCNQCNQMFSQAFSLSRHLKRHSESHA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00393748;
90% Identity: iTF_00393748;
80% Identity: -