Basic Information

Insect: Priocnemis perturbator
Gene Symbol: -
Assembly: GCA_963942575.1
Location: OZ012651.1:15849372-15851712[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0006 0.059 14.3 6.1 2 23 6 28 5 28 0.96

2 16 0.00051 0.051 14.5 0.5 2 23 35 57 34 57 0.97

3 16 0.81 80 4.4 7.1 1 23 63 86 63 86 0.96

4 16 5.8e-06 0.00058 20.6 0.8 1 23 92 114 92 114 0.99

5 16 0.034 3.4 8.8 8.6 2 23 120 142 119 142 0.94

6 16 4.5e-06 0.00045 21.0 3.5 2 23 207 228 206 228 0.97

7 16 0.00023 0.023 15.6 1.9 1 23 232 254 232 254 0.97

8 16 0.0013 0.13 13.3 0.1 1 23 360 382 360 382 0.97

9 16 5.5e-05 0.0054 17.6 3.3 1 23 388 411 388 411 0.97

10 16 0.036 3.6 8.7 4.3 1 23 418 441 418 441 0.94

11 16 0.00012 0.012 16.5 0.4 1 23 447 469 447 469 0.96

12 16 0.00023 0.023 15.6 0.3 2 23 475 497 474 497 0.95

13 16 0.00073 0.073 14.0 3.3 1 23 504 526 504 526 0.98

14 16 2.1e-07 2e-05 25.2 0.6 1 23 530 552 530 552 0.98

15 16 0.33 32 5.7 1.6 3 23 560 580 558 580 0.73

16 16 4.3e-06 0.00043 21.0 0.7 1 23 586 609 586 609 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0006	0.059	14.3	6.1	2	23	6	28	5	28	0.96
2	16	0.00051	0.051	14.5	0.5	2	23	35	57	34	57	0.97
3	16	0.81	80	4.4	7.1	1	23	63	86	63	86	0.96
4	16	5.8e-06	0.00058	20.6	0.8	1	23	92	114	92	114	0.99
5	16	0.034	3.4	8.8	8.6	2	23	120	142	119	142	0.94
6	16	4.5e-06	0.00045	21.0	3.5	2	23	207	228	206	228	0.97
7	16	0.00023	0.023	15.6	1.9	1	23	232	254	232	254	0.97
8	16	0.0013	0.13	13.3	0.1	1	23	360	382	360	382	0.97
9	16	5.5e-05	0.0054	17.6	3.3	1	23	388	411	388	411	0.97
10	16	0.036	3.6	8.7	4.3	1	23	418	441	418	441	0.94
11	16	0.00012	0.012	16.5	0.4	1	23	447	469	447	469	0.96
12	16	0.00023	0.023	15.6	0.3	2	23	475	497	474	497	0.95
13	16	0.00073	0.073	14.0	3.3	1	23	504	526	504	526	0.98
14	16	2.1e-07	2e-05	25.2	0.6	1	23	530	552	530	552	0.98
15	16	0.33	32	5.7	1.6	3	23	560	580	558	580	0.73
16	16	4.3e-06	0.00043	21.0	0.7	1	23	586	609	586	609	0.97

Sequence Information

Coding Sequence: ATGGAAGCTGTCCTCATATGTCACGTTTGCCATATGTTCTTCAAATCGAGCGAACATCTCGATAAACACATTAAAATGAAGCACGGTCCTAAGGAAGCTTCGAAATGTCCGATTTGCGATCGTCAATTGAAAAGCATGAAATCTCTGAACATGCATATCGAGACTCAACACAAAGGAGATAAAGTGTTTCAATGCGAGTTGTGCAATTTCAAGTCTAAAAGACagaactgcgtaaagaagcatcggTATAGGAAACACTCGACCGTCAAATTATTCAAATGTTCAGAGTGTCCGAAGAAGTATAATATTGAAACTGACTTGAAGGCACATATGAAGACGCACAGCGTCGAACTTTGCTTTTGCGACATATGcgggaaaatgtgcaaaaaccaTTATTATTTGTACTCGCATAAAAATCGGAATCATAAGATATCTTCGAAGGAGATGGATTTCTCGGAAGTGAATAACGATGTCTCAGGATGGGAAGAAGAGAATGTTGAGAACAAGAGGAAATGCGAACCGGAGGCATTGCCGAGTTTAGGTCGTCCATGTAAAAGGCGGAAACGCTCGACTAGCAATTTGAAACGGAAGGGGCGTCGCAATAAGAAATTTCCTCTCAAATGTCCCAAGTGCAAATGGTGTTTTAGGACGGAATGGTTGTTGAAAAAACACATAAAACGACACTCCTTGGTGTACAGATGCGATCAGTGCGACGCTGTGTTCAAGTACAAGGGATGTTTTATTAAGCATCAGGGGATACACAAAGACAAGGAGACAGTAGAGAAGAGGGTTGTGCGGAAGACTCAAAAGTTGGAAACAATCAAAATAAAAGTGGAGAAGACGGAGGAAGTGAAGATAAAGGAAGAGTCCACAGAGACAAGAATCAAATCTCCGTCAAGAAGGAGACATAAAACACCTAAAAAAAATCCCCAAACTAAAAAGAAAATCTGTGCAAAGCGTCCGCCTAAACCCGAGTTCGCGGAAGATTCGAGTTCCGAAGCAATTGAAGAAATGCCTAAGACCGATGAAGACGAGTCGCGAACCTTCAAATCGCATAAGAGAAAACGAAAGAAGGATTATGCGTGTCCTATTTGCGAAGTCGCTTTTAAACTTCGTGGCCTGTACAACAAACATGTCGTGACGCACAGCGATTTGCGTCCGTACAAATGTCAAACCTGCGAGAAGCAGTTCAAGTACAACTTCGGCCTAAAGAAGCATATAAAGGAACAGCATAGCGAATCGGCGCAACTGTACTCCTGCAAAATCTGCGACTTTAGCACGAAACATTACCCGTACCTTCAGGAACACTTCACCAGAAAACACACAGAAGAGTACAAGTATAAGTGCGATTTTTGCGGAAAACGCTTCAAGGTCGAGCCGGACTACAAAATGCACATTGCGGATCACGAGACAGGTCCTCAAGTTTGCGACATATGCGGTGTATCCTACCCGAATAAAAGTTCCCTTTACTATCATCGAAATTACAAGCACACACAGAAGACAAAGTCGTTCGAGTGCAAGATTTGCAAGAAACGTTTGCATACCGAGAAAAACTTGGAGACACATTTGCAGCAACATGAGCAGACTTACGTTTGCGAAGAGTGCGGCATGAAATTTGCACGGAAATACGGGTTGACGAAACATAGGAGGGTTCATACGGGGGAAAAATCCCATCTTTGTCCCGTTTGTGGAAAAGCTTTTGCCTGTATGGCAACGCAAAGGGTGCACTTCTTGACTCATGCTGGTATGAGACCTTACGTTTGCAACGTTTGTGGATTGAATTTCACTCAGAGATCATCTCTGATGTTGCACTGGAAGAAGAAACATCCCGATGCCTGCGAACCACCACCCCCGGTTACGTTGAAGAATATTTTAGAGACGATCAAGTCGAATATAGACTGA
Protein Sequence: MEAVLICHVCHMFFKSSEHLDKHIKMKHGPKEASKCPICDRQLKSMKSLNMHIETQHKGDKVFQCELCNFKSKRQNCVKKHRYRKHSTVKLFKCSECPKKYNIETDLKAHMKTHSVELCFCDICGKMCKNHYYLYSHKNRNHKISSKEMDFSEVNNDVSGWEEENVENKRKCEPEALPSLGRPCKRRKRSTSNLKRKGRRNKKFPLKCPKCKWCFRTEWLLKKHIKRHSLVYRCDQCDAVFKYKGCFIKHQGIHKDKETVEKRVVRKTQKLETIKIKVEKTEEVKIKEESTETRIKSPSRRRHKTPKKNPQTKKKICAKRPPKPEFAEDSSSEAIEEMPKTDEDESRTFKSHKRKRKKDYACPICEVAFKLRGLYNKHVVTHSDLRPYKCQTCEKQFKYNFGLKKHIKEQHSESAQLYSCKICDFSTKHYPYLQEHFTRKHTEEYKYKCDFCGKRFKVEPDYKMHIADHETGPQVCDICGVSYPNKSSLYYHRNYKHTQKTKSFECKICKKRLHTEKNLETHLQQHEQTYVCEECGMKFARKYGLTKHRRVHTGEKSHLCPVCGKAFACMATQRVHFLTHAGMRPYVCNVCGLNFTQRSSLMLHWKKKHPDACEPPPPVTLKNILETIKSNID

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -