Basic Information

Insect: Priocnemis perturbator
Gene Symbol: -
Assembly: GCA_963942575.1
Location: OZ012651.1:15830912-15833414[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 17 4.1e-05 0.004 18.0 0.1 1 23 40 62 40 62 0.98

2 17 3.6e-05 0.0036 18.1 0.2 1 23 64 87 64 87 0.97

3 17 0.018 1.7 9.7 0.4 1 23 92 115 92 115 0.91

4 17 8.1e-06 0.00081 20.2 1.5 1 23 121 144 121 144 0.98

5 17 7.6 7.6e+02 1.4 3.1 2 23 150 172 149 172 0.89

6 17 0.00096 0.095 13.6 2.0 1 23 177 199 177 199 0.98

7 17 0.00021 0.021 15.7 0.1 3 23 207 227 206 227 0.97

8 17 6.7e-06 0.00067 20.4 0.3 1 23 233 255 233 255 0.98

9 17 0.0033 0.32 12.0 2.5 2 23 314 335 313 335 0.97

10 17 0.00049 0.049 14.6 3.3 1 23 337 360 337 360 0.96

11 17 0.00078 0.077 13.9 0.9 1 23 365 388 365 388 0.97

12 17 0.00021 0.02 15.7 3.0 1 23 394 417 394 417 0.96

13 17 0.00088 0.088 13.8 2.0 2 23 424 446 423 446 0.95

14 17 0.001 0.1 13.5 0.3 1 23 451 473 451 473 0.96

15 17 8.6e-05 0.0085 16.9 0.3 3 23 481 500 480 500 0.98

16 17 4.6e-06 0.00046 20.9 0.1 1 23 506 528 506 528 0.97

17 17 0.0004 0.04 14.8 0.4 1 23 534 556 534 556 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	17	4.1e-05	0.004	18.0	0.1	1	23	40	62	40	62	0.98
2	17	3.6e-05	0.0036	18.1	0.2	1	23	64	87	64	87	0.97
3	17	0.018	1.7	9.7	0.4	1	23	92	115	92	115	0.91
4	17	8.1e-06	0.00081	20.2	1.5	1	23	121	144	121	144	0.98
5	17	7.6	7.6e+02	1.4	3.1	2	23	150	172	149	172	0.89
6	17	0.00096	0.095	13.6	2.0	1	23	177	199	177	199	0.98
7	17	0.00021	0.021	15.7	0.1	3	23	207	227	206	227	0.97
8	17	6.7e-06	0.00067	20.4	0.3	1	23	233	255	233	255	0.98
9	17	0.0033	0.32	12.0	2.5	2	23	314	335	313	335	0.97
10	17	0.00049	0.049	14.6	3.3	1	23	337	360	337	360	0.96
11	17	0.00078	0.077	13.9	0.9	1	23	365	388	365	388	0.97
12	17	0.00021	0.02	15.7	3.0	1	23	394	417	394	417	0.96
13	17	0.00088	0.088	13.8	2.0	2	23	424	446	423	446	0.95
14	17	0.001	0.1	13.5	0.3	1	23	451	473	451	473	0.96
15	17	8.6e-05	0.0085	16.9	0.3	3	23	481	500	480	500	0.98
16	17	4.6e-06	0.00046	20.9	0.1	1	23	506	528	506	528	0.97
17	17	0.0004	0.04	14.8	0.4	1	23	534	556	534	556	0.97

Sequence Information

Coding Sequence: ATGAAGAACGAACACAATGGCGAAAACACAATGTCCAACGAAGAATCACGAAACAAACCATCGAAAGAAAAGAAACCTCGAATCTCAAAGGAGAACCGAGTGAGCCGCAGACCAACGTATCCGTGCAAAGAATGCGATGCATCATTCACCATAAAACGAGAGCTAGCCAAGCACGCGAAGATTCACAAATACATCTGCGTAATTTGCTCGGTAAACTTCGAACGTCAGAGTCAATTAACATCCCACATCACCACGGCTCATGGTCTGAACAAACATCCTTGCGAGCTGTGCGACTACGTGAGCGCGACTAAATGGGCCCTACAAGATCACTTCGTCAGAAAGCACACGGACGACTATCGTTATAAATGCAAAATCTGCGGCAAAGAGTTCAAAATCAAGAACGATCTACTGACCCATACGAATCGTAGTCACAGTACAGCTTTCGTCGTTTGCGATGTATGTGGACACATCAGCAAAAGTGTTCATGCTCTGAAATGCCATAAGAAGTACGCGCACTTTAAGCCGCAGTTCGAATGTAAAATTTGTAAACGTCGTATGACGACGCAGGAGTATCTCGATAAACATGTCCGATATCACGAGACGAAGGAGAGAAATATTTGCCCGACCTGCGGGAAGATATTTGGTGAAAAGTACTCGTTGGACGTCCACATGTTCATTCATACAGGCGTCAAACCGTTCGTTTGTCCCGTTTGTAAGAAAGCATTCTCGAGGCAAACGGCTCGACAACAGCATATCTTGATTCACATGGGAAAAAGACCGGATTCGGATCCGCTGAATGTAGAGATAAAGTTCAGCATAACATCATCGACCACCGTCAAACGCACCGATTTCCTAATTTGGCCCACCAGCAAAAACATTCGAGACGACGACCATACTGTAAAATACACTAAAGAACTCGAATCACCGTCGACTTCCGTGGAATGCGACCACTGTCGTCGAAGATTTCTAAAAAAGAGCAATCTCGCCGAACACTTGAAGCAACACCGGCACAAATGCTCAGATTGCCCGAAAACCTTCAGTCTTCATCGATACCTCGTAACACACGTCGAGAAGATCCACCGAAACCAAGTGTACGAGTGCAGTGTCTGCGAGTACAAGAGCAACAACAAAGGAACGCTCAAGAATCACTACATTCGATTACACACCAGCAACTACGACTTCTCATGCGACACCTGCGGCAAACAGTTCAAAATCAAGAAAGCTTTAAATCATCACGTGAAACAGAATCACAGCGGCGCACCACCCATAGTGTGCGACGTCTGCGGTCATTTCAGTAAAAATCTCCACGCCCTGAAAGCACATATGAAGTATCGACACTATAAGCCGGAATTCGTTTGCACGATATGTCGACGGGGTATGACGACGAAGGAAAATCTCGAGCAGCATCTGACGTGGCACGAAACCAGGGAGAAGATACTCTGTCCCACTTGTGGCAAAAGATTTCGCGGTCGTGACTTGGAAGTCCACATGAGGGTGCATACGGGCGTGAAACCGTTCCCTTGTCCCGTTTGCGGGAAAACGTTCAGACGACAGACAGCTCAGGAGCAGCACGTGTTGATTCATACGGGGAAGAAGCCATACGTGTGTGATATTTGCGGACAGGCGTTCGCTCAAAAGCCAGGACTTATTTGTCATAGGAAAAGGCATCCCGGCCCGTTGCCACCACTGCCGGTGGTGTCGATTAAGAACATTGTGACGGAATTTACGAAGGAGTACGCGAGCAAGAATCCGGTTATTAAGGTGGAATGA
Protein Sequence: MKNEHNGENTMSNEESRNKPSKEKKPRISKENRVSRRPTYPCKECDASFTIKRELAKHAKIHKYICVICSVNFERQSQLTSHITTAHGLNKHPCELCDYVSATKWALQDHFVRKHTDDYRYKCKICGKEFKIKNDLLTHTNRSHSTAFVVCDVCGHISKSVHALKCHKKYAHFKPQFECKICKRRMTTQEYLDKHVRYHETKERNICPTCGKIFGEKYSLDVHMFIHTGVKPFVCPVCKKAFSRQTARQQHILIHMGKRPDSDPLNVEIKFSITSSTTVKRTDFLIWPTSKNIRDDDHTVKYTKELESPSTSVECDHCRRRFLKKSNLAEHLKQHRHKCSDCPKTFSLHRYLVTHVEKIHRNQVYECSVCEYKSNNKGTLKNHYIRLHTSNYDFSCDTCGKQFKIKKALNHHVKQNHSGAPPIVCDVCGHFSKNLHALKAHMKYRHYKPEFVCTICRRGMTTKENLEQHLTWHETREKILCPTCGKRFRGRDLEVHMRVHTGVKPFPCPVCGKTFRRQTAQEQHVLIHTGKKPYVCDICGQAFAQKPGLICHRKRHPGPLPPLPVVSIKNIVTEFTKEYASKNPVIKVE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -