Basic Information

Insect: Priocnemis perturbator
Gene Symbol: -
Assembly: GCA_963942575.1
Location: OZ012657.1:2727581-2735123[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 5.5e-05 0.0055 17.5 1.4 1 23 440 462 440 462 0.96

2 18 0.00014 0.014 16.3 1.7 1 20 468 487 468 490 0.93

3 18 2.3e-05 0.0023 18.7 1.1 1 23 496 518 496 518 0.98

4 18 8e-05 0.0079 17.0 4.4 1 21 524 544 524 546 0.95

5 18 1.1e-05 0.0011 19.8 5.6 1 23 552 574 552 574 0.99

6 18 2.5e-05 0.0024 18.6 5.3 1 23 580 602 580 602 0.97

7 18 0.00016 0.016 16.1 9.1 1 23 608 630 608 630 0.97

8 18 9.1e-08 9.1e-06 26.3 2.7 1 23 636 658 636 658 0.98

9 18 6.7e-05 0.0067 17.3 6.7 1 23 664 686 664 686 0.97

10 18 2.1e-05 0.0021 18.9 5.8 1 23 692 714 692 714 0.98

11 18 5.6e-07 5.5e-05 23.8 2.9 1 23 720 742 720 742 0.98

12 18 8.3e-06 0.00082 20.1 7.8 1 23 748 770 748 770 0.98

13 18 2.6e-05 0.0026 18.6 9.1 1 23 776 798 776 798 0.98

14 18 3.4e-05 0.0034 18.2 7.5 1 23 804 826 804 826 0.98

15 18 0.0016 0.16 12.9 8.8 1 21 832 852 832 854 0.94

16 18 1.3e-05 0.0012 19.6 0.4 1 23 860 882 860 882 0.98

17 18 0.03 3 8.9 4.5 1 23 892 914 892 914 0.98

18 18 4.8e-07 4.8e-05 24.0 1.3 1 23 920 942 920 942 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	5.5e-05	0.0055	17.5	1.4	1	23	440	462	440	462	0.96
2	18	0.00014	0.014	16.3	1.7	1	20	468	487	468	490	0.93
3	18	2.3e-05	0.0023	18.7	1.1	1	23	496	518	496	518	0.98
4	18	8e-05	0.0079	17.0	4.4	1	21	524	544	524	546	0.95
5	18	1.1e-05	0.0011	19.8	5.6	1	23	552	574	552	574	0.99
6	18	2.5e-05	0.0024	18.6	5.3	1	23	580	602	580	602	0.97
7	18	0.00016	0.016	16.1	9.1	1	23	608	630	608	630	0.97
8	18	9.1e-08	9.1e-06	26.3	2.7	1	23	636	658	636	658	0.98
9	18	6.7e-05	0.0067	17.3	6.7	1	23	664	686	664	686	0.97
10	18	2.1e-05	0.0021	18.9	5.8	1	23	692	714	692	714	0.98
11	18	5.6e-07	5.5e-05	23.8	2.9	1	23	720	742	720	742	0.98
12	18	8.3e-06	0.00082	20.1	7.8	1	23	748	770	748	770	0.98
13	18	2.6e-05	0.0026	18.6	9.1	1	23	776	798	776	798	0.98
14	18	3.4e-05	0.0034	18.2	7.5	1	23	804	826	804	826	0.98
15	18	0.0016	0.16	12.9	8.8	1	21	832	852	832	854	0.94
16	18	1.3e-05	0.0012	19.6	0.4	1	23	860	882	860	882	0.98
17	18	0.03	3	8.9	4.5	1	23	892	914	892	914	0.98
18	18	4.8e-07	4.8e-05	24.0	1.3	1	23	920	942	920	942	0.97

Sequence Information

Coding Sequence: ATGAACAGTGAGCAGCATACATTGCCAGCGACTACGCAGGCGCAACAAGAGGATGTAAACGCGGGTCAAAGTGGTCGTCCTTCGTACCCAGGTGGTTTGGCTACTGCGACCAGTCTTGGCAATGTAGGGAATACCCCTCATTCATCCGCAGACCTGCGTGTAGGTACAGCTGTAGCATTAGCCTCCTCGGTAGCTAAGTATTGGGTCCTCACCAATCTGTTTCCCGGACCGCTACCTCAGGTCTCAGTCTACCACCATTCCCACCACAACTCCTCGCATAGGAGTGGTGGAGGTGGAGAGGCACCTTCCAAAGAGCCAGCCTCTTCATTGAACCAGGATATGGCGTTGACTTCCAGTTCACACCATCAGTCAACACCgcctcatcatcatcatcagccgACAATTAGCAACAGCAATCATCATAGCTCTCTACAGTCGAATGCACAGATTCCAGTTTCCCTTCCTGGACTTAACTTAGACGGTGCGCATATTCCAGCGAGCGTCAGCCacttacaggcagcacatgcacaaATGCAGCAGCAAATGCAGGCTCAACAACAACAGCtgcatcagcagcagcaacaacagccgcaACAGCAGTCCCatcaccagatgcagaaccaccAAAACGCTCAGAACAATGGACCTAGTGGGCATAGTCAGAACGCACAACGAGACGACAACAAGGTGAAGAAGGACGAGGGTGGCAGCTGTACGACCGAGCGTTGCAGTGATAATCAGGTTCATTGTCAAGTCCAATGCGATCTTCAGTTACAACCGCCACAAGACTTACAACAGAGCCTaatgcaacaacaacagcagcagcagcaacagatcGGCGTCAATATAAGCGGCAACTCGTCAGCCGAAAGTGGCAATCAGAACAACTCCGAGAAGCCTGAGAAGGAAAAGGAATTGCGTCAGCTGAACATGACACAATTCCAAGTCCCGGACTTGAAACCAGGAGGTCATATGATGGACGTAAGGACGGCCAATGGTTCAGTGGTAAAGATCAGTGCTGGGAATGAGCAAGATTTAGCTAAGACCCTTGGTGTGGAGATGGTACAAAGTATGTACAAGgTTAACGTTGAAGATATCAATCAACTCTTAGCATATCACGAAGTGTTTGGAAAGCTTCAGAGCGAAATAGCGGCAGGTACGACCTTGGTTGGAAGTACAGTTCCCACTCAAACGGTAACCACGATCCAAAACGGAACGCCGATAGTGCAACAGGTTCAATTGAATAAGTTCGATATAAAAAGCAGCGATGGCGAGGCAACGCCAGGCCCGAGTGCCTCACCGGTGTCCGTGGGCAGTCATGCCTGCGAAATATGTGGAAAAATCTTTCAGTTTCGCTACCAATTAATAGTTCATCGACGATACCATACGGAAAAGAAACCGTTTACGTGTCAGGTATGTGGGAAAGCATTCTCGAATGCAAACGACCTGTCGCAGCATGGAAAATGCCATTTAGGCGGCTCCATGTTCATGTGCACGGTATGTTTCCATGTGTTTGCAAATGCACCCTCGTTGGAGAGGCACATGAAGAGACATGCTACCGATAAACCATATAATTGCACAGTTTGCGGAAAGAGTTTTGCACGAAAGGAACATCTGGATAATCATACCAGATGTCACACCGGTGAAACACCTTATAGGTGCCAGTACTGTTCGAAGACATTTACTCGAAAAGAACATATGGTAAACCACGTGCGCAAACACACTGGTGAGACTCCCCATCGATGTGATATTTGCAAGAAGAGCTTTACTCGCAAAGAACACTTTATGAACCATGTTATGTGGCACACAGGAGAAACCCCCCATCACTGTCATGCTTGTGGCAAGAAGTATACGCGCAAAGAGCATCTCGCCAACCACATGCGTTCGCATACCAACGACACTCCATTCCGCTGTGAAATATGCGGTAAGTCCTTTACGAGGAAGGAGCACTTCACGAACCACATAATGTGGCATACGGGCGAGACGCCGCACCGCTGCGATTTCTGCTCGAAGACGTTCACGCGAAAGGAGCATCTCCTGAACCACGTTCGCCAGCACACGGGTGAGTCTCCACACCGATGCGGCTTCTGCTCCAAATCGTTCACCAGAAAGGAACACCTTGTTAATCACATCCGCCAACACACAGGGGAGACGCCCTTCCGCTGTCAGTACTGTCCAAAAGCATTTACGCGGAAGGATCATCTGGTGAACCACGTCAGGCAGCACACGGGTGAGTCACCGCACAAGTGCCAGTATTGCACCAAATCCTTCACGAGGAAGGAACATTTGACCAATCACGTGCGTCAACATACAGGCGAATCGCCACACCGATGCCACTTCTGCTCCAAGTCATTTACTCGTAAGGAGCACTTGACGAATCATGTACGAATCCACACTGGCGAATCGCCGCACAGATGTGAATTCTGTCAGAGAACATTTACAAGAAAAGAGCACCTCAATAATCATCTCCGTCAACACACCGGAGATTCCTCACATTGTTGTAATGTGTGTTCTAAACCATTTACAAGAAAGGAGCATCTTGTGAATCATATGCGTTGCCACACTGGCGAACGTCCATTCGTGTGCACCGAGTGCGGCAAAAGTTTCCCTCTGAAGGGCAATCTTCTGTTTCACATGCGTTCGCACAACAAGGGAAGCAACGCGGAGAGGCCATTCCGTTGCGATCTCTGTCCAAAGGACTTTATGTGTAAGGGACATCTGGTGTCGCACAGACGTTCTCATTCTGACGAGCGACCGCACAGTTGCCCTGACTGTGGAAAGACCTTCGTCGAGAAAGGTAACATGCTTAGACATTTGAGGAAGCATGCTGCCGAAGGTCCACCGACGCAAGTTAGCACGCCGTCAGCCATTCCTCAATCTGGTGTCTTACCGATACCTGCCGCGGCGGTATTGGTTGGACATCCTCTGGCACCACCGGCACCGCCTGTAGTGCCGCAGCATACTGTCGTTGTACCGACTCCACCCAGTGTGCTGACGTCGTATTAA
Protein Sequence: MNSEQHTLPATTQAQQEDVNAGQSGRPSYPGGLATATSLGNVGNTPHSSADLRVGTAVALASSVAKYWVLTNLFPGPLPQVSVYHHSHHNSSHRSGGGGEAPSKEPASSLNQDMALTSSSHHQSTPPHHHHQPTISNSNHHSSLQSNAQIPVSLPGLNLDGAHIPASVSHLQAAHAQMQQQMQAQQQQLHQQQQQQPQQQSHHQMQNHQNAQNNGPSGHSQNAQRDDNKVKKDEGGSCTTERCSDNQVHCQVQCDLQLQPPQDLQQSLMQQQQQQQQQIGVNISGNSSAESGNQNNSEKPEKEKELRQLNMTQFQVPDLKPGGHMMDVRTANGSVVKISAGNEQDLAKTLGVEMVQSMYKVNVEDINQLLAYHEVFGKLQSEIAAGTTLVGSTVPTQTVTTIQNGTPIVQQVQLNKFDIKSSDGEATPGPSASPVSVGSHACEICGKIFQFRYQLIVHRRYHTEKKPFTCQVCGKAFSNANDLSQHGKCHLGGSMFMCTVCFHVFANAPSLERHMKRHATDKPYNCTVCGKSFARKEHLDNHTRCHTGETPYRCQYCSKTFTRKEHMVNHVRKHTGETPHRCDICKKSFTRKEHFMNHVMWHTGETPHHCHACGKKYTRKEHLANHMRSHTNDTPFRCEICGKSFTRKEHFTNHIMWHTGETPHRCDFCSKTFTRKEHLLNHVRQHTGESPHRCGFCSKSFTRKEHLVNHIRQHTGETPFRCQYCPKAFTRKDHLVNHVRQHTGESPHKCQYCTKSFTRKEHLTNHVRQHTGESPHRCHFCSKSFTRKEHLTNHVRIHTGESPHRCEFCQRTFTRKEHLNNHLRQHTGDSSHCCNVCSKPFTRKEHLVNHMRCHTGERPFVCTECGKSFPLKGNLLFHMRSHNKGSNAERPFRCDLCPKDFMCKGHLVSHRRSHSDERPHSCPDCGKTFVEKGNMLRHLRKHAAEGPPTQVSTPSAIPQSGVLPIPAAAVLVGHPLAPPAPPVVPQHTVVVPTPPSVLTSY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00899003;
90% Identity: iTF_00899003;
80% Identity: -