Basic Information

Gene Symbol
Snapc4
Assembly
GCA_963942575.1
Location
OZ012651.1:5862657-5865281[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 1.9 2.3e+03 -0.7 0.0 3 16 152 165 151 167 0.83
2 6 2.8 3.3e+03 -1.3 0.0 13 43 211 246 207 249 0.64
3 6 4.6e-12 5.4e-09 36.5 0.6 1 45 255 301 255 302 0.96
4 6 1.2e-06 0.0014 19.1 0.1 3 43 311 355 309 356 0.96
5 6 1e-11 1.2e-08 35.3 0.0 1 46 364 410 364 410 0.94
6 6 1.7e-11 2.1e-08 34.6 0.0 3 42 418 457 416 459 0.96

Sequence Information

Coding Sequence
ATGAGTGATTCGGAAGAAATCCTTGACGATATACGGGCTTTGGAATACGCTTTAGCGTCACAGTCTGCTTCGCGTAACAGCACACCCACTGATTCTAGCTCGTCGTTTGTGCCAGGCACTTTGGAGATTGAGGAGGAGTCCTTACCGAATAGCACAGTTAATGAAACAACACCGTCAACAGTATTTAATCTCAATACAAAATTATTGGCACTTATGTATGCCGCCAGAGACGAGGTGAGCGTACTTTTGGAAGAATGTAACCAAAAATTAGCATTGATAGAAGAGCGTCTCGCAGAGCATACAAAGTTAACAGTAAGTTCCAAGATAATGCTTACCACTGCCGGTATGCCCTACTTCAAGGATAGGAACCATTTTTCAGCAGGGCCAAATGAGGACACTAAACTGAAAGCGTTACGTAAAGAATTACAAGTCGTTGCCCTTCGTAAAGTATGTAGGTGGACACCTAAAGATAGAGACATTCTTATGAAAAGTATAAAAGAGGAAGCAGCATATAGCTCTGCATTACTAGCCCAGGAAGATACAAAAAAGTTTAGTTTATCTCTTGACAGTTTAGTCAATGGCACACTTGAGAAATCTGGAAACACGTGCACAAAGTTATCAAACGAATTTAAAGATATGGTCGGACCTTTGGGTACCAAAGAATATGATTGGCTCAAGATAGCTGCTGTTGATTTTGATGGTAAGCACTCTGCGGACGAATGTAGGGTAATGTGGAATGTATTTCTACATCCTGACATTAATAAAGGCAAGTGGTCAGAAGCAGAGGACTTAAAAATGAAGAAATTGGCAGAGAAGTATAAATTCCAAAATTGGGAGACCATTGCGAGTGAGCTGAACACAAAACGGAGTGGATATCAGTGTTTTATACGATACAATACGACGAAGAGTATCAAAGATTTAAGATGCCGCCCATGGACCCCAGAAGAATGCCAAAGCCTTTCTAAAGTAGTCAATGAGCTTCGACTTGGAAATTATGTTCCATGGGGAGAAGTAGCTGAGTGCATGTTTCAAAGAGTCAAACAACAAGTATACTTTCGATGGAAATACAGTTCCGCGCCGCATTTGAAGAAAGGCAGATTCACCGAGGAAGAAGACAGGGTCCTTTTGAAGGCCGTAAAAAAATATGGAGTGAATTTCTCGAAAATAGCCGTTACTTTACTACCTCATCGTACTACTATACAACTGAATGATCATTACCATACTTTACTCTCGAGAACGAAGAATTCAAACGTTTGGACTGTAAGTGACGACACTAAGTTACTCAAGTTGTACAATGAGTTAGGTCCTGATTGGTCAAAAATCTCGAAAATATTAGTCGCCAAGAGCAGGACGCAAGTCAGGCACCGTTATACTGCTGTGAGCAAATTTCTGAAAAAAGGAATGACAATTGCAAATTTACCTAGGCGCACCAAGACTGAAATAAGTACATTAGAATACGAAGAAGATGATTATCCTGATGAAACGATGTACGACGAGGTTGATAATGTTGATGATTTATTGCTTCAACACTTTTGCTGCTTAGAATTATCAACAAACTGTTATGTAGAAGAAACATTTTCTGATATGTTAGATCTCCAGGATATCACAAAAAAACTGTACAAACTTTTACAATATTTAGGAGCGAATCTTAACATTCCGAACAACTTCAATAATATTCCACTGAGCGACTCCGAAAAATATATTTTACGTTCATTAAAAGAATATGACAGAGTACAGAATGACGAGGCGCGGCGTAGGAATATTGTAGAGAGACTAAGATTAAAGATGTTTGGATCACAGAATGATCGTACAGAGAAAGAACATTTCATACCATCCTATCCTTCTGAATCCAAAGTAAGGAAGGAAGACCTAATAACAGAGAAGATAGATTACGATCTACATATGAACAATTGTTTTACTATCGAGATTTTGAAGGAAATTGAGACACCCGACAATGTGACTGCGTGTATTGATAACAACAACCAACTCGAAGATTTTCAGAAAATCAGCAATTTACTGTTATCtcggcattataatttcttggCAGAAAATATGCACAATATATCGGCAACAACATTAAAGTCTCAAGTAGATCAGCATAATATGTCGGACGGAAACATTAAGAGAGAAATGTCCAATGAGGGAGTATCAGTCGTTTCACCTATTAGATGCCTTAATGTTCTACAAGAAAAAGGGCTCAAGTTTATGCAGCATTGCAGAAGAGTTGTCGCAGCATCTAGAGCTCGCGTTGACGCTGACAAGCCATTGTATACTGTACACTTTGAAATATGTAGCGGAATTGAACCCGATATCGTGACATTGGTAGCCTTCAAAAATCTGTTCTCATTAAAgcaactacatgacattgaagtTGCTGCAGATCCTGTTACCTGCAAGCAACCAGCGAAATGCCAGAATGCAAATAATGTACTAAAGAAGCGCCTCATACAGTTGTTTAAATATCCTATTGTCATGTCCCATAATTTTGTACCGCAAGTTTACGTGGATTTCTTGAACAACAGTAAAACTAattcaaagaaaagaaaagctTCTAAGAGTGCCGACACAAGACGTAAAAAAATAAAGGTAGAAGAGATTTCTACGTATTTACCGCCATgccaataa
Protein Sequence
MSDSEEILDDIRALEYALASQSASRNSTPTDSSSSFVPGTLEIEEESLPNSTVNETTPSTVFNLNTKLLALMYAARDEVSVLLEECNQKLALIEERLAEHTKLTVSSKIMLTTAGMPYFKDRNHFSAGPNEDTKLKALRKELQVVALRKVCRWTPKDRDILMKSIKEEAAYSSALLAQEDTKKFSLSLDSLVNGTLEKSGNTCTKLSNEFKDMVGPLGTKEYDWLKIAAVDFDGKHSADECRVMWNVFLHPDINKGKWSEAEDLKMKKLAEKYKFQNWETIASELNTKRSGYQCFIRYNTTKSIKDLRCRPWTPEECQSLSKVVNELRLGNYVPWGEVAECMFQRVKQQVYFRWKYSSAPHLKKGRFTEEEDRVLLKAVKKYGVNFSKIAVTLLPHRTTIQLNDHYHTLLSRTKNSNVWTVSDDTKLLKLYNELGPDWSKISKILVAKSRTQVRHRYTAVSKFLKKGMTIANLPRRTKTEISTLEYEEDDYPDETMYDEVDNVDDLLLQHFCCLELSTNCYVEETFSDMLDLQDITKKLYKLLQYLGANLNIPNNFNNIPLSDSEKYILRSLKEYDRVQNDEARRRNIVERLRLKMFGSQNDRTEKEHFIPSYPSESKVRKEDLITEKIDYDLHMNNCFTIEILKEIETPDNVTACIDNNNQLEDFQKISNLLLSRHYNFLAENMHNISATTLKSQVDQHNMSDGNIKREMSNEGVSVVSPIRCLNVLQEKGLKFMQHCRRVVAASRARVDADKPLYTVHFEICSGIEPDIVTLVAFKNLFSLKQLHDIEVAADPVTCKQPAKCQNANNVLKKRLIQLFKYPIVMSHNFVPQVYVDFLNNSKTNSKKRKASKSADTRRKKIKVEEISTYLPPCQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-