Pper004825.1
Basic Information
- Insect
- Priocnemis perturbator
- Gene Symbol
- -
- Assembly
- GCA_963942575.1
- Location
- OZ012643.1:8336654-8337712[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.9e-10 4e-07 30.1 0.1 1 40 12 51 12 56 0.89 2 2 7.4 7.7e+03 -2.8 0.0 17 23 136 142 126 143 0.70
Sequence Information
- Coding Sequence
- ATGCCTCCAGTCAAGGGTTGCTTTAGAAATTATTCCGAAGAGGCGATGAGGGCAGCCATTGAAGATGTGCGCTTGCACAAAACTGCAATAAGGGCTGCGGCACGTAAGTTCGGTGTTCCACGAATCACTCTAAAATACAAAGTGGAAGGAAAATCGCCAATGGAGAGAAAAATGGGACCTCCTCCAGTTTTAAATCAAACGGAGGAAAATGAGATCCGTGAATGGATAGAAAAAATGGCCGTGGCTGGTTTCCCAGTTACAGTCGAGGAACTTGTAAcaagcgtgcaacattatattcAAGACATAAAACGCGAAAATCCGTTTAAAAATGACCGTCCTGGTAACAGCTGGGTAAAGGGTTTTTTAATTAGAAATCCTACAATATCAAGAAGGGTGGCACAAAACCTAACAATTTCACGAGCGGCAGTCACCAGTGATAAGATATACAATTGGTTTTCTGAAGTATATGAGTACTTGAACAAGAACAATGTAGAAACAATCTTGAACGACCCATCGCGGATTTTCAACTGCGACGAAACGGCATTTTTTTTAAATCCCAAGGGCAACAAAGTGTTGGCGAAAAAGGGATGTAAAAATGTTTACCAACAAATTAATCCTGATGACAAGGAGTGTGTGACGGCATTAGTAACGGGCAGCGCCAGTGGTGTAGTTGCCCCTACAGTAGTTTTATACAAGTACAAACGTATACCCCAAGAAATTGCTGCCAATTTTCCCCAAAAATGGGGTTTGGGTAAAAGTGACTCAGGGTGGATGACATGCGAAGCATTCTTTGAGTTTGTAGCAGATATATTTTACCCATGGTTAGTAGCATCCAAAATTACGCTTCCTGTCATTCTTTTTATGGATGGACACGCCTCACATTTAAGTTTACAAACGAGCCAGTTTTGTGATAAAAAAGGTATTATTTTGGTGGCCCTCTACCCTAAAGCAACCCACTTAATACAGCCCATGGATGTTGCTGTTTTTAGAACATTAAAAGAAAACTGGAAGAATAAAGTTCATGAATGGAGAATTACAAATATTGATAACccagtttaa
- Protein Sequence
- MPPVKGCFRNYSEEAMRAAIEDVRLHKTAIRAAARKFGVPRITLKYKVEGKSPMERKMGPPPVLNQTEENEIREWIEKMAVAGFPVTVEELVTSVQHYIQDIKRENPFKNDRPGNSWVKGFLIRNPTISRRVAQNLTISRAAVTSDKIYNWFSEVYEYLNKNNVETILNDPSRIFNCDETAFFLNPKGNKVLAKKGCKNVYQQINPDDKECVTALVTGSASGVVAPTVVLYKYKRIPQEIAANFPQKWGLGKSDSGWMTCEAFFEFVADIFYPWLVASKITLPVILFMDGHASHLSLQTSQFCDKKGIILVALYPKATHLIQPMDVAVFRTLKENWKNKVHEWRITNIDNPV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -