Pimp036745.1
Basic Information
- Insect
- Prenolepis imparis
- Gene Symbol
- pnr
- Assembly
- GCA_030444845.1
- Location
- JAUDTA010000015.1:7952669-7961020[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.7 8.4e+03 -2.1 0.1 3 13 233 248 232 254 0.64 2 2 1.1e-16 5.5e-13 49.7 5.1 1 35 423 456 423 457 0.98
Sequence Information
- Coding Sequence
- ATGTTCGATGTACCGCAGAAGTTCTACGAGCTGTGTCGCCTTTGTTTATCTCAGGACGGTGTCACATTGTCCATATTCGAGGAGGAGGGCGTTCAGCGGAGTTTCGCCGAAAAGATATTAGCGTGCCTGTCAATTACGgtAAAAGATGGCGATTCCCTACCAACAAATATCTGCCATCGGTGTGTATCTAAATTGGATGTATTACACACCTTTCGAGAAGTGTCACAAAAGTCTGACATCATACTTAAACAGTACCTGGATTATGCCAAGCAATTGTCATCTCCTGACGAGCAGAAGGAGATTTCCTCCACTGCCAAAGTAGCAGGCGAAAGCCCTCTACAATCATTCCTCGAGTTGAATAGAACATTATTCAATGAGGAGTCTAACTCCGAGCCGGCCAGCATTAATCAAAACATAATACCTCAAACTCAAACGCATCATCTACAGTTGCAAAACAGTGATATACCAGAACATGACGATAATATTAAGTGTGAACCAGAGGATGATACATGTTCTAATAGCTCAGATCCTGACCGATTAGAAATTGAGGATCGTGATGAGCAGGAAGTCGAAAGCGAAGAAAATGGTTATGACATGACTGTTAgcaagagaataaaaattgagGACAATTATGATGGCTCTGAATCCAACACAGCAAATTGTAGTCCGATTAATAGAATGGATACCCCAGAGAGCAATTGTTCCGATAGTAACATTGACCATGAAACGACGAAGCTTTGGCAAGCTTTAGCTAACAATAGAAGTTTGGAAATCACACGAACAAATGGAGATAAGCTAAACAATGGATTTAGTGGCGAAGCCACCAATCTGCTACGCTCCTTGATCAACAACAGGCAGATTGGTATCACCACCGTTGATTCAGACAAAATAACTCCGCAAATCAAATTCTATAGGGATATCCAGGGGACAACTATCGAACATATGCTAACCGATTTTCCTGTGCTTGCTAATCGTACCAATATAGCGACTTTAGAAAATAAGagTGCCTCGATAGACAGTAACCCATCTAGCCCTGCCAGTGTCGGTCGTAAGGAAGTGACAGCTACGAAAGGTCGCAGGAAACAAAGCTATCCCAGTAAGGCTCCTGCGAGTCCGGATATCGTCGCCAATTATCAACATGAACGCAATAATGAAGAGCAGGCTCATGACTTCACCACGTGGTCGAACAAGATAAAGGGAAAGATGGACGATCAGAAGCAGTTCGATCAGCAAAGTGGCAACATGACGAAAAAGGTCGACATGTCTTGCACAAATTGCGGCACTATGACAACCACCATCTGGAGAAGAAATATGAAGGGCGAGATGGTGTGCAATGCTTGCGGGCTGTATTATAAACTTCATGGTGTTAATCGTCCGGTTACTATGCGAAGAGATACCATACATACGCGTAGACGTAGACCTAAAGGCGAGAAACCAACGAGACACAGAAGTAAGATActcaatcatttatttattttttaa
- Protein Sequence
- MFDVPQKFYELCRLCLSQDGVTLSIFEEEGVQRSFAEKILACLSITVKDGDSLPTNICHRCVSKLDVLHTFREVSQKSDIILKQYLDYAKQLSSPDEQKEISSTAKVAGESPLQSFLELNRTLFNEESNSEPASINQNIIPQTQTHHLQLQNSDIPEHDDNIKCEPEDDTCSNSSDPDRLEIEDRDEQEVESEENGYDMTVSKRIKIEDNYDGSESNTANCSPINRMDTPESNCSDSNIDHETTKLWQALANNRSLEITRTNGDKLNNGFSGEATNLLRSLINNRQIGITTVDSDKITPQIKFYRDIQGTTIEHMLTDFPVLANRTNIATLENKSASIDSNPSSPASVGRKEVTATKGRRKQSYPSKAPASPDIVANYQHERNNEEQAHDFTTWSNKIKGKMDDQKQFDQQSGNMTKKVDMSCTNCGTMTTTIWRRNMKGEMVCNACGLYYKLHGVNRPVTMRRDTIHTRRRRPKGEKPTRHRSKILNHLFIF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00126375;
- 90% Identity
- iTF_00869291;
- 80% Identity
- -