Basic Information

Insect: Prenolepis imparis
Gene Symbol: ttk
Assembly: GCA_030444845.1
Location: JAUDTA010000004.1:1397164-1400362[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 3 2.8 8.2e+03 -1.9 0.0 10 21 91 103 87 103 0.63

2 3 5.2 1.6e+04 -2.8 0.1 16 33 221 238 221 239 0.80

3 3 6.8e-15 2e-11 44.8 0.1 1 45 378 422 378 422 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	3	2.8	8.2e+03	-1.9	0.0	10	21	91	103	87	103	0.63
2	3	5.2	1.6e+04	-2.8	0.1	16	33	221	238	221	239	0.80
3	3	6.8e-15	2e-11	44.8	0.1	1	45	378	422	378	422	0.97

Sequence Information

Coding Sequence: ATGGCTCACATCATGAATCCGAATCAACAGTACTGCCTCCGCTGGAATAATCATCGTTCGAATCTGCTGAACGTCTTCGATGATCTGCTGCATACCGAGGCGTTCACCGACGTGAGCCTCGCCGTGGACAGTGGTCGGACCATCAAGTGCCACAAGATCGTCTTAGCTGCGTGCTCGTCCTACTTCCAGAATCTGTTCCTCGCTCTGCCCGCTACTGTGCACCCTGTAATCGTGCTCAAAGACGTCAAGTACGCGGATTTAAAGGCGATATTGGAGTACATGTATCGCGGCGAGGTGAGCGTGCAACAGGACAAGCTGGCCGGTCTACTCAGGGTCGCGGAGATGCTGCAGGTGAAGGGTCTAGTGGAGCATACTAGCAGTAGTAGCGGTGAAGAACAATCCTCGGCGTTCGATTTTCGATATCGAGGACAGGACGATATCAAGGAGATGTCGTTGTCGCCGCCCCCGGCCATCAGCACCAGCACTAATACAAGCAACGTAGCGGTGCATAGCAGCGGTCACGCGTCATCACCGCACTCCACCGGTGGTAGTTATGGGGATCCTTACGGCAAGTCCTCGGCAACGAGCGCGGCGATCAATCAAGTTCACGATCAACTGAAAGCGTTTCCCCTCTGGTCGCTACCCATCCCGTTGCACCATCAAATCACCACTCAACAAGCATCGCTGTATCACTCCACTCCGGTTCCCTCGCTTCTCGGTGACAACGGCTTCGACGACTCGTCGCTCAAGCGCATCAAGAAGACGCTGCAGTCGACCCTGCTGACGAATCGCGACACGCCGATCCTGCGCACCGTCCTTGGCCAAGGTCACGTCGACAGCTCGGTCCAGAGTCTGCCGTTGTTGCAGCCCGACAGCCACGAACCGGTGCATTTTCGCGCGAGCAGCAATGGTTCCGCAAACGACGACAACCGTCACAGCAGCCTTGATTTGACGCACGAGGAGGCGGCCCACAGCTCCTACGCGGATGCTCCTTCTGTGGAAGAGGACATGAAGCAATTGTCGCCGCAGTCGCACACCGGGGAGTCCAAGTTAGGTATTGGCAGACGTAGCCCGAATAGAAACGCGACTTGCTTGAATACGAAGCCCGAATGGAAACGGTACAAACAATACACCCGAGATGACATCGCGGCGGCGATCGACGCGGTGAAAAGAGGCATGAGCGCTGTGCAAGCTGCGCGGAAATACAGCGTCCCGTCTCGCACGCTCTACGACAAGGTGAAGAAACTCGGCATCCAGACGTCGCGGCCCTCCAAGCGTTCGTCGGTCAGCAACGGCAGAGCGGCCTGCTTCCCCTACGGCATCGGCGGTAACGTGAACggcaatatttataacaacAGGAGCGTGATCTCCTCCGAGAACGAGACCGACACCAGCAGCAACGTAAACATGGAGAACACAGCCAGCAGCACGTCGAACGCCGCGTTCGACGCCCTTTACGGTAAATCAGCGAGGGATGCATCGGATTCGATGTCCGAAACGATGGCGCGTTGCAGTTTGAGTCCGGTCATACATTGCGCCAATACGAAgcaacaacagcagcaacagAATTCTGATGACGAGGTAGAAGACTTATCGGTGAGTCGTAAATCCGATGTTCCGGTGATCGTGCATCACTTGACATCATCGGACGTCAAGGATGAGCCTAAGGATACTGCAGACAATAATGACTGTAGTTATAATTAg
Protein Sequence: MAHIMNPNQQYCLRWNNHRSNLLNVFDDLLHTEAFTDVSLAVDSGRTIKCHKIVLAACSSYFQNLFLALPATVHPVIVLKDVKYADLKAILEYMYRGEVSVQQDKLAGLLRVAEMLQVKGLVEHTSSSSGEEQSSAFDFRYRGQDDIKEMSLSPPPAISTSTNTSNVAVHSSGHASSPHSTGGSYGDPYGKSSATSAAINQVHDQLKAFPLWSLPIPLHHQITTQQASLYHSTPVPSLLGDNGFDDSSLKRIKKTLQSTLLTNRDTPILRTVLGQGHVDSSVQSLPLLQPDSHEPVHFRASSNGSANDDNRHSSLDLTHEEAAHSSYADAPSVEEDMKQLSPQSHTGESKLGIGRRSPNRNATCLNTKPEWKRYKQYTRDDIAAAIDAVKRGMSAVQAARKYSVPSRTLYDKVKKLGIQTSRPSKRSSVSNGRAACFPYGIGGNVNGNIYNNRSVISSENETDTSSNVNMENTASSTSNAAFDALYGKSARDASDSMSETMARCSLSPVIHCANTKQQQQQQNSDDEVEDLSVSRKSDVPVIVHHLTSSDVKDEPKDTADNNDCSYN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01254903;
90% Identity: iTF_01254903;
80% Identity: iTF_01254903;