Pimp000866.1
Basic Information
- Insect
- Prenolepis imparis
- Gene Symbol
- kn
- Assembly
- GCA_030444845.1
- Location
- JAUDTA010000001.1:7878045-7879455[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.3e-33 5.4e-29 102.4 2.3 137 182 1 46 1 61 0.96 2 2 0.76 7.7e+03 -3.8 0.1 151 164 96 109 94 127 0.74
Sequence Information
- Coding Sequence
- ATGTACGAGGGGCAAGATAAGAATCCGGAAATGTGCCGCGTTCTTCTAACGCATGAAGTTATGTGCAGTCGATGCTGCGATAAGAAAAGCTGCGGCAACAGGAACGAAACGCCCAGCGATCCGGTCATCATCGACCGGGGCCAGATAACtcctcgaaggagattcgccTGTATAAGATGGAATCCCATGTACCAAGCTCCTAGGACATTTAGGCTTGCAAAATACGTTTTCTACGAGGTGCGACGGGGCTGCCGTGTAGAAGAGTACTCGAATACGTACTCGGGCGTACTTATACATTCTCTACCTTGCGCATGGTGCTGCTCGTCCATGGAACGGCAGGAAGGAAGAGGTTTCCCGCGGGACCTGGACCGAGATAGTCTTCAGGAGGACATCTTGTGCTCAGGGGTGCTCAACTCTCGGTACGTCGATACGTCGACGGCTTCGAGCTTTCATCCGTATTCGAAGGGATATGTGTTACACGCCGGTGACAGGCAAAAGCCCGATAGGCCTCGCGCGTAA
- Protein Sequence
- MYEGQDKNPEMCRVLLTHEVMCSRCCDKKSCGNRNETPSDPVIIDRGQITPRRRFACIRWNPMYQAPRTFRLAKYVFYEVRRGCRVEEYSNTYSGVLIHSLPCAWCCSSMERQEGRGFPRDLDRDSLQEDILCSGVLNSRYVDTSTASSFHPYSKGYVLHAGDRQKPDRPRA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -