Pimp000856.1
Basic Information
- Insect
- Prenolepis imparis
- Gene Symbol
- kn
- Assembly
- GCA_030444845.1
- Location
- JAUDTA010000001.1:7830749-7834483[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.9e-44 3.9e-40 139.2 0.2 183 261 87 169 84 183 0.91
Sequence Information
- Coding Sequence
- ATGGACGCACTCTTCGGGGGAAATGACAATGGCGTCCCATGGGAGAAAAAGCCTACCAACCACGCAGAAAACTACCTCTCCTCCCTCCTACCAACATCGTCGTCGGCGTCGTCTCGCCCTCCTGATTGTTTCCTACGCGTTTCCTTCGCTTTCTCGATCCTTCTCGGTCTGACATTCAGCTACCTGATCTTCAAACACTCTCTTCGTCTCTCAGTCAACCCCTTCCATTCCTATAGGCGCAAACGGGAATACTCTGTATTCTTCCTCAAGTTCTTTCTCAAGTGTAACCAAAATTGCCTCAAGAACGCTGGCAATCCACGCGACATGAGACGCTTTCAGGTGGTCATTTCTACACAAGTGGGAGTAGAGGGACCATTACTAGCGGTCTCGGACAACATGTTCGTTCACAACAACAGCAAGCACGGGCGCAGGGCGAAACGTTTGGATCCCAGTGATCCCGGCGAATATAATGCCGTTTTACCAATCAAAATCGACTTCCCAAGCGATTCCCGTTCGAGGCAGATCGCAATTCGAATGCTCGCGGCGTGTTGTTTCCCTCGTGCAAGCGCGCCTTCCGGCGAAGATGGGGTGGGGTCAGTTTTCTTCGAGATCGGTATAACGACTCCGGGAGCTGCGGCGGAACGGAATCGTAAGAGGGTGCAAGGAAGGCGCGCCGCGCCGGTAGAATGGGATATATGGAGTCATAGGGCAATTCAGCAAAGTTTGGCGTCGGCCGCGCATACAAACGGCTGA
- Protein Sequence
- MDALFGGNDNGVPWEKKPTNHAENYLSSLLPTSSSASSRPPDCFLRVSFAFSILLGLTFSYLIFKHSLRLSVNPFHSYRRKREYSVFFLKFFLKCNQNCLKNAGNPRDMRRFQVVISTQVGVEGPLLAVSDNMFVHNNSKHGRRAKRLDPSDPGEYNAVLPIKIDFPSDSRSRQIAIRMLAACCFPRASAPSGEDGVGSVFFEIGITTPGAAAERNRKRVQGRRAAPVEWDIWSHRAIQQSLASAAHTNG
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -