Basic Information

Insect: Prenolepis imparis
Gene Symbol: JARID2
Assembly: GCA_030444845.1
Location: JAUDTA010000002.1:19027250-19034805[+]

Transcription Factor Domain

TF Family: ARID
Domain: ARID domain
PFAM: PF01388
TF Group: Helix-turn-helix
Description: This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 9.4e-23 4.7e-19 70.0 0.1 6 89 1351 1432 1347 1432 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	9.4e-23	4.7e-19	70.0	0.1	6	89	1351	1432	1347	1432	0.94

Sequence Information

Coding Sequence: ATGGTTCTGAGTCGTAAcgataagagaaagagaaaagagggaGATCTGGTGGATCTTATGGAACCACTTTCAGAATCTCCCAAGAGGACCAAAGTTCACGCACAAAGGAAGTTTGCACAAGGTGCAAATACAGTGTTCAATACATCACCTACACCTGTCAAGGACAAAGAGAAAACTAAACCTGccatgattacagaattaataACTCATAAACGTCCAAATACGGAGGACtttctaacatttttatgCTTCAGaggAACATCCACTTTGCCACccaatttaaatttcttcaaCGTGAGTAccaaaaaagagaaacaaaaaCATAAATCAGCTCGTGCTTCTACAGATAAAATATCATCCTGTACTAATACTTCTACGGAGGTTCAGAAGCAAGACACATGTCAGAAGAATGTAACAAAAGTAAAGTCTGTTGTACCAGATAAAAAGAAAGTGCCTAGTACGATACACAAAAGCATTACCAAGCTTAAAACAGCAACGTCTACGGTTCAAGCgcttaaaaagaaatatcaagAACAACGTCTTGCTAAACAAAGGATCAAGAATAAATTCAAAGCCACATGCGTTATGAGAACGCGATCATGTACGGAGAGATCTATGTTGAAGACTGGTACTCAATTGGCGCCGAGAAAGTTCTTACCTAGAATAGAGACGAAGAGACATGGCTTGAGAAGTGGTGTACTGTCAGATAAAAGCAATAAATCTTTATCAAAGACGAAAATCGTGTCGTCCAAACCAAAGAAGAAAGTTAATCTGAAACCGAAAAATAATGATACGTCATACACAGATGTGTCATCCGAAGAAGAGAAAGATGATGAAAAGGacgatgaagaagaagaattacCTGTGGAAAAGTCGACATCGCAGATAAAACGTAACATACAAAGAGGTATTCAGAAAAAGATTTGTACCAGAAGCAAATCGGAGATGAGAAGAGTTACGAGATCTCACAGTGGTATAATCCCTTCGCAAAATCCCTCCAGAAGACCTACCAGGAAAACTAAGGAAGCAGCTGCTGTTTATATGGAAATTCTTGGTAGAAAACTAGTGAGCCCGGATCTAGAGAATGAAGATAATCTTTCGGTCGAGAGTTTTCCTGAACTGCCAAATGCTCGTAGAATAGCGCAAACGGAGAATGAGCTTAAAGCCAAAGTAAAACAGACTAGTATGaaaactattaataataaaactaaggATTCTAAGGTCAATTCCTTCAACAGTAACGGTAATAAGCGATTGGATAAGAGTAAAAACAACAAACTAATTCTAAAAAGCAAACGTCTGATGAGAGTGCAGAGATATTGCGAGGAAGATAGCGACGAGGAATCTGAAACCTCAATAGAAACGAACAATACGAGACCCATTACTAGACAGAGTCTTGTTGGGAAAACTAGTGACAAACCAGTCGGTAGGAGTCTCAGATCGTCCTCCAAAAATACAACTGTACAAGCAGAAGTAACACAAAGCAACACAAATAACAAACCGAAGATTCCAGTTCAAAGTATGAAATCTGCTAGGGATAAATTTGTGATGAAACGTAAACGTGAGCAAAATCTGTCTAAAACACCATCGTCAGATAAGATTAGTGGATCGAAGCAGAAGAGTTTCAAAAGTGATCAAAACAAAAACGTGGAATCCGAAGAGGAAACATTGGGAATGCTgcttaataaaatgaaaaagaagaaagaaaatgatggagaagaagaagaacggATCTCCGATAGCGTTAATAATGCGAAAAATAGCGAGACAATTTCCAACGATGCGCAAAAGACGCCAACGAAACCGGATCTGCCAAAAGTATCGGACGACGAGGAATCGTTTCGCGGATTTACCAAGAAGGCGATATCAAAAGGTTTGAATTCCTGTCACGCTAATGTTAATTTACTAGAATCAGAATCCAACGACAAACTGAATTTACACAAAACGTTAGACGCACCGAATCAAACGGCGAATCAGAGCACAGCTTCGCAAGAAAATAATCAAGAAAAGACTTTATTGGTCAAAGTTGCTTCCCCAGtcgcaaatatattaaaggaCGAATGCAGTACATCTGTGCAGGATCAAAAATCAATATTGGATCTGTCCATCAAAACACAAGACTCCTTATTACCGTCGATCGAACAGGTACAGAATAAAAAGTGTAATCACGAGAATGAGGTTTCTCCTAATCTTATAGATATGCCGTTGTCGACTCTACACACGAGAAAAGAACGGGTGAACATGTCGACCGAGCAGATAGAGAAGTGGCTGAACGAAAGCTCGCTCGCCAAAGAAGAGAGCAAGCTGGAGATGGAGAATGTTTCCACCTTCAGATACGAACCTACGGGGAAGTTGAAGACGGACGTCTCGCATCTGTCTATCCCGACGAAGATCCAGCATCTAGTACGTCCCGTCAATGTAACACTTTCGAAATTAGGGGACAAAATCGGTTTGAAGAACCGTACTGCGATACAGACCAGAAACGTAATAGCAGTAACATCCAATGCGCATAACGTCGAAGCGAAATCGCAGAATattgtcaataaaaataaatctaataccGAGGAACTTTTaagaaatgttaaaaataaatgcgaaAAGGCAAATAAGGAAACTGTTGAAGATACCAGCGATACTGTGTCGAAGTCGGATCAAAACTCTACAGACGGTTCTATAGAGAAGAAATCACCGacggaaaagaaaatatttcaaccgCGAAAATCCTTTATACCCAAAGTTAGACAACGTAAACTGGTTATTCCGAATGCGAATGCATTTTCACCGGAAAACGAGAGCAGCGTTTACGCGTTCGAAAGCGACACCGAGGTTCCCATCAGCACACCTTTCAGGAGGAAGATTAAGGATACCGCGAGCTCGACAGCCACGGAGACCAAAGTACTTGCTGAAACTGATAAATCGAATGCTAAATCAATTAAGAATAATTCCAGAACATCGACGGACGACAAGAAGAAACTGTCGAATAACACGAAGAAAGAACAGGAGACACAGGGCCCGATAAGTACAACGAATACGACGCTGAATAAATTTGAACTGCCCAAGAATTTCGCAAGCTTAACCAACGTCCAAGTGTTACCGCTCGATAAGATCAAGACGAGTTGGAGCAACGTAAATTGCAGCGCTTCTATAGCGGTTCAGGTGAATCTTGATGAAACTACTCAGGAGCAAGAGAATACAGACACGAGTCAGCAGAAGAGTACCGAGATATCTACTCAAACCGAAACGAGTAACGagaacgacgacgacaacgacggaCAGCTATTTTACATTCCGTTGCAAGCTGTTACGAGGAGCGGCCCGAATTTGGTACAGGGGCAACAGCTGATACAAGGTGTGGCAGTCAAACTCGGCACGGAAGGACCGACCGGTCCTAATCAAAGAGTACTCCTTCGGGCTAAATTGGTCACTAAGCCACCCTTATCTGTAGCGCGTTGTCCACCGATAGGAACGGTACAACCGACAACGCGTACTCCACCTAATCCCACGGCGATCACAGTGGAACAACAGGTTCCGTCGACCTCGACGACTACAACTGTTTCGACTGGGGTGGCAAGTATGCCGACCTCACCAGCGAAGAATGATACCTCGGTACCAAACTTGAGTCGTCAAAATGTCAGTACGAGCGCGAACAACAATTTGGAGAAACTCGCGAAGTCTCCAAAGTTATCCAGGGAAAGAAAAACTTCTATCGATTCGACAAAGAGTGGCAAAagGACTCAAATGAAATGCAAACAAAAAGGATCTGAACTGTATTCTTCAAGTAATAACACAACGTTTCCAAGTGCGAAGAGCATAAATAATGAGGCTCGCGTAGTCGAGGCACCCACGTTTCATCCAACGGATAAAGATTTCCAGGATCCTCTGGAGTACATAGACAAAATAAGACCGGTTGCCGAGAGGTTTGGAATATGTAGAGTTGTGCCTCCGccaaattttaaacCAGAATGCAAGGTATCTGATGACATGAGATTCACGGCTTATAATCAATATGTACATCGCATGCTTCATAGATGGGGTCCTAATGTGAAAGAAATGATGgctattaagaaatatttagccACTCAAAGTATTACTCTGACTCAACCACCATGGatTGGTGGAATGGAAGTTGATTTGCCTCACTTGTACCAAACAGTTCAAAATTTAGGTGGATTGAAAGAAgttattgaaaagaaaaagtgGCAAAAGGTAGCAGATGGTATGAAGATACCTAAATCTGCACAAGATCGCGTTACCAAATTAGAtgatatttattgcaaatatttattgccATATGATACTTTATCCCCGGAGGAACGCGGGAAATTATTTGACGAGGTTGAAGCTGAAtggaagagaaaagaaaaaaaaactttgcaaAGGCAGGAAGCGTCATCCAATGATAATGATGAGGAAGACGAAGATGATAGTTCTGATGAAATTGAGGAATGTATTGTAAAAgGAAGAAACATGCCGTTGAACGCTTTTTACCGAATCGCCCGTAATACCCAACGTATGTGGTTCGGCGAGAATCAACGAGGAAACGAAGCCGAAGGCGCATCAGCCGACGATGTGGAGAATGCGTTTTGGAAACACGTTGCCGAAAGGAAACGTCACGTCTGCGTACACGCGGCGAGCATCGACTCGAGCGGTCGTGGATTTGGCTTTTCCGTTGCCAAAAATAGTCCGTTCGCTAGACACGCCTGGAATCTCAAAGTACTCACTAACAATGCCGGATCAGTATTGAGAGCCTTGGGCCCGTTAATGGGTGTGACTGTGCCAACGTTGCACGTGGGTATGTTGTTTAGCGCTTGTTGCTGGTATCGCGATCCACATGGTCTGCCATGGATAGAGtatctgcatacgggtgctaagAAAATTTGGTACGGGATACCTGACGAGCATAACAACAATTTCCGACAGGCGCTCTCGAAGATGGTACCACGATATTGTAAGAATAAGACTATATGGTTACCTTCTGACACTGCCATGGTCCCGCCGGAGTTGTTGGTCAACAACGGTGTACCGTTATGTCGCACCGTGCAAGAACCGGGACAGTTTATCGTTGTATTTCCAAAAGCGTTCACGTCGAGCATATGCACCGGTTACGTGGTATCCGAAAGCGTATATTTCGCGCAACCATCCTGGTTGGAAACAGCCGAACAAGTATTCAAAGATATACAAGACAGTTGTGAACCCTCTATCTTTTCATTCGAGAggctattatttaatatcattaatgatACCAGATctcatatagatatattaaaacagATATTGCCGAGTGTGATCAAGATCCGCGAGAAGGAGTTAGATCATCGTAAACAACTGGAAAACGTGGGTCTTAACAATAGAGAAAGATTGCCTCTTCCAGACAGTGGAAAAGGAAAGAAAGGGAAAAGAGTGAAAGAGGATGACGGCGATTTCGAATGTGAGACATGTAGAGCCAATTTGTTTGCCTCATTGGTAAACAATTCGCAAGATGATAGTGTCTACTGTTTGCCGCATGCATTGCAATTAATCAATCATAAAAAGCAGATTCTGAAACATTGTACTCTAATGTATACCTATGACGAAGATGAATTAGATGGATTGATTCACAAACTGGAATACAGGATCGAAGCCAAATCTAAAAAACCtaatcaaataaaacaaaataagtaa
Protein Sequence: MVLSRNDKRKRKEGDLVDLMEPLSESPKRTKVHAQRKFAQGANTVFNTSPTPVKDKEKTKPAMITELITHKRPNTEDFLTFLCFRGTSTLPPNLNFFNVSTKKEKQKHKSARASTDKISSCTNTSTEVQKQDTCQKNVTKVKSVVPDKKKVPSTIHKSITKLKTATSTVQALKKKYQEQRLAKQRIKNKFKATCVMRTRSCTERSMLKTGTQLAPRKFLPRIETKRHGLRSGVLSDKSNKSLSKTKIVSSKPKKKVNLKPKNNDTSYTDVSSEEEKDDEKDDEEEELPVEKSTSQIKRNIQRGIQKKICTRSKSEMRRVTRSHSGIIPSQNPSRRPTRKTKEAAAVYMEILGRKLVSPDLENEDNLSVESFPELPNARRIAQTENELKAKVKQTSMKTINNKTKDSKVNSFNSNGNKRLDKSKNNKLILKSKRLMRVQRYCEEDSDEESETSIETNNTRPITRQSLVGKTSDKPVGRSLRSSSKNTTVQAEVTQSNTNNKPKIPVQSMKSARDKFVMKRKREQNLSKTPSSDKISGSKQKSFKSDQNKNVESEEETLGMLLNKMKKKKENDGEEEERISDSVNNAKNSETISNDAQKTPTKPDLPKVSDDEESFRGFTKKAISKGLNSCHANVNLLESESNDKLNLHKTLDAPNQTANQSTASQENNQEKTLLVKVASPVANILKDECSTSVQDQKSILDLSIKTQDSLLPSIEQVQNKKCNHENEVSPNLIDMPLSTLHTRKERVNMSTEQIEKWLNESSLAKEESKLEMENVSTFRYEPTGKLKTDVSHLSIPTKIQHLVRPVNVTLSKLGDKIGLKNRTAIQTRNVIAVTSNAHNVEAKSQNIVNKNKSNTEELLRNVKNKCEKANKETVEDTSDTVSKSDQNSTDGSIEKKSPTEKKIFQPRKSFIPKVRQRKLVIPNANAFSPENESSVYAFESDTEVPISTPFRRKIKDTASSTATETKVLAETDKSNAKSIKNNSRTSTDDKKKLSNNTKKEQETQGPISTTNTTLNKFELPKNFASLTNVQVLPLDKIKTSWSNVNCSASIAVQVNLDETTQEQENTDTSQQKSTEISTQTETSNENDDDNDGQLFYIPLQAVTRSGPNLVQGQQLIQGVAVKLGTEGPTGPNQRVLLRAKLVTKPPLSVARCPPIGTVQPTTRTPPNPTAITVEQQVPSTSTTTTVSTGVASMPTSPAKNDTSVPNLSRQNVSTSANNNLEKLAKSPKLSRERKTSIDSTKSGKRTQMKCKQKGSELYSSSNNTTFPSAKSINNEARVVEAPTFHPTDKDFQDPLEYIDKIRPVAERFGICRVVPPPNFKPECKVSDDMRFTAYNQYVHRMLHRWGPNVKEMMAIKKYLATQSITLTQPPWIGGMEVDLPHLYQTVQNLGGLKEVIEKKKWQKVADGMKIPKSAQDRVTKLDDIYCKYLLPYDTLSPEERGKLFDEVEAEWKRKEKKTLQRQEASSNDNDEEDEDDSSDEIEECIVKGRNMPLNAFYRIARNTQRMWFGENQRGNEAEGASADDVENAFWKHVAERKRHVCVHAASIDSSGRGFGFSVAKNSPFARHAWNLKVLTNNAGSVLRALGPLMGVTVPTLHVGMLFSACCWYRDPHGLPWIEYLHTGAKKIWYGIPDEHNNNFRQALSKMVPRYCKNKTIWLPSDTAMVPPELLVNNGVPLCRTVQEPGQFIVVFPKAFTSSICTGYVVSESVYFAQPSWLETAEQVFKDIQDSCEPSIFSFERLLFNIINDTRSHIDILKQILPSVIKIREKELDHRKQLENVGLNNRERLPLPDSGKGKKGKRVKEDDGDFECETCRANLFASLVNNSQDDSVYCLPHALQLINHKKQILKHCTLMYTYDEDELDGLIHKLEYRIEAKSKKPNQIKQNK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01423428;
90% Identity: -
80% Identity: -