Basic Information

Insect: Portevinia maculata
Gene Symbol: -
Assembly: GCA_949715645.1
Location: OX454528.1:8896924-8902044[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 3.2 1.3e+03 2.6 1.3 1 19 68 86 68 89 0.93

2 14 0.14 59 6.9 1.1 2 20 102 120 101 122 0.90

3 14 0.21 87 6.4 0.3 3 22 126 145 125 145 0.95

4 14 0.87 3.6e+02 4.4 2.3 2 23 152 173 151 173 0.96

5 14 0.00022 0.092 15.7 0.5 1 23 198 220 198 220 0.98

6 14 0.041 17 8.6 1.0 2 23 691 712 690 712 0.94

7 14 0.0045 1.9 11.6 0.3 2 23 772 793 771 793 0.95

8 14 0.0076 3.2 10.9 0.5 2 23 853 874 852 874 0.93

9 14 0.025 10 9.3 0.3 2 23 903 925 902 925 0.94

10 14 6.7e-05 0.028 17.4 2.6 1 21 936 956 936 957 0.95

11 14 0.00012 0.051 16.5 1.0 3 23 967 987 965 987 0.97

12 14 2.6e-06 0.0011 21.8 3.1 1 23 993 1015 993 1015 0.98

13 14 7e-05 0.029 17.3 2.4 1 23 1021 1043 1021 1043 0.98

14 14 0.00073 0.3 14.1 0.3 1 20 1049 1068 1049 1070 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	3.2	1.3e+03	2.6	1.3	1	19	68	86	68	89	0.93
2	14	0.14	59	6.9	1.1	2	20	102	120	101	122	0.90
3	14	0.21	87	6.4	0.3	3	22	126	145	125	145	0.95
4	14	0.87	3.6e+02	4.4	2.3	2	23	152	173	151	173	0.96
5	14	0.00022	0.092	15.7	0.5	1	23	198	220	198	220	0.98
6	14	0.041	17	8.6	1.0	2	23	691	712	690	712	0.94
7	14	0.0045	1.9	11.6	0.3	2	23	772	793	771	793	0.95
8	14	0.0076	3.2	10.9	0.5	2	23	853	874	852	874	0.93
9	14	0.025	10	9.3	0.3	2	23	903	925	902	925	0.94
10	14	6.7e-05	0.028	17.4	2.6	1	21	936	956	936	957	0.95
11	14	0.00012	0.051	16.5	1.0	3	23	967	987	965	987	0.97
12	14	2.6e-06	0.0011	21.8	3.1	1	23	993	1015	993	1015	0.98
13	14	7e-05	0.029	17.3	2.4	1	23	1021	1043	1021	1043	0.98
14	14	0.00073	0.3	14.1	0.3	1	20	1049	1068	1049	1070	0.95

Sequence Information

Coding Sequence: ATGGATGTGGATTTCTCAGTgattaaagaagaagaactcGATATTAAAACTGAAATTGAAGATGCCTTAACCACAACAGTGCCTCAGCAGGAACTACCAAACGGGTTTTGTACGCTATACAAGGAAGAACCCATGACCGAAGAAGAATTAAACATTTCAGTTTCTGCCCATCCAACACTTTCATCTGTCCCTGATTTTCAATTTGAATGCCATGCCTGTCAAAGTTATTTTTCCAGCGAAGAATTACTGCTGGATcataattgtattgaaaatctaAACGAGACATCCACACGAACATCCCTTCGATGCAGCGATTGCCAGCAAAATTTCACCTCTGAAAAGGACATTATCAGTCACGAGTGCAAAGCGAAGCTGTGCAAAAATTGTGAGCAATATTTTGAAACCGTAAGCAAGCTGGAAGATCACAAGCAGACTCGATGTAAATTCCGCAAAAGGTGTTCGATGTGCAAACAAGTATTTCTTACGAAGTTCTTCTATGATAATCACATACAGTCGCATATAAATAGGGCTAAGCGACTTTCTCCAAATCTGAAATCGAACAAATCCCTAAAGCAACCTGGCGCGGAACCTTTCGTTTGCAATGTCTGCGAAATGGGATTCAAGGTTGCTAAAGATTTACTGAAACACTACAAGAAGCATTTCCCAGCTGCTGGTGTGGAACAGCATAAGAAGGGCAAGAAGTTGAAAAAGAATGGTGTAAATGCTGCTATTGACGTAGATGCCGCTTTGCCTCCAACCAATGTCACGAAAGCCGTCGATTCATCTAATCAAACTCTTAATGCATCAGCAGAAGTTGATATTCCTCAACTCACTCCAAATAAGAGCCTTCAAAATTTCATTCCCAATAGCCCATCAATCTCACTTGATTTGAATCAAGCAAACCTCTCTGCTGCATTATCACAAGTGCAACCAATTACTATCCCACACCAGCAAGGCTTCACATTCAATGTTCAGGGCAACACATTAATTCTCAACACAAATCTCGCCCAGCCACAAGTAAGTTTCAGCCCTCAGAATGTCATTTTCGATACTCAGGGAAACGCCTTCACATTAACGAATACAATTTCCAAATTGCAACCATTGCATGGGCCTCAACGGTTGGACGTCATTGTTGATGGCCTGGGTAACGCCTACGCATTAACCAATACACTACCTCAGTTCCCACCGCAACAAAAACCTCAACGTTTGGATGTCATTGTCGATGGCAACGGGAACGCCTTTGTAATGAAAAAAGAAGACCTCATCACAGGAGATTTACAATACCCACAAATCCGAACTCTTTCGAACCAGCAAGTCCTTGTGGATGCCCAGGGCAATGGTTTCGCGTTGATACAAAATCCCGAAGTGGAAAATGTGAGGAAAATGGCCAATAAGGAGATCACAGGAGATTTACAATACCCACAAATCCGAACTCATTCGAACCAGCAAGTCCTTGTGGATGCCCAGGGCAATGATTTCGCGTTGATACAAAATCCCGAAGTTCCTAAAATCGAAGATCTCACCGCTATAACCAAGGATCACTGTTATACAAGCAATTTTTCCTTCCGTAACAAAGCTCCCGAGCCAGTTGTCACTGCTCCAAAAGCAGCATCTACTGATCCGATTCCCTATAACGATCTACTTCTTGAGGAACTCTTCGATCGGAAAACAAAATCAATGGCAAAGGAACGAGAAGCCGCCAGCAGATCGGTGTTGCCGCTAAAACAGATGGACGTTCATCAAACTGTTGAAAGTGAAACGCAGAACATCAAAGAAGAAGTAAACATCCCACAAACCATTACTGAGGAACTTGTAGTTGAAACAGATACCACTCAACCTTCGGAAGACTACGAAGATATGATTGTTTGCAATAAAGTTCCGAATTCATTCCGAAAGAGCCTTATTATTGAGAATTTAAAAGACCAGTACCAGAAGGCGAAAAAGAGCCCCGACGTTTCCTCGGCCGACGAAAGCAGCCAAAATTCAGTTCCTCGCTCAATATATTGTAAAGTATCCGATTCACTAAACTCCTACGCTACCGAATTGAACGTGAACCATCGCTATGCATGGATTTGTCCCTCGTGTCCACGGCAGTACTTTCAGCGTCACTCCTTTGTGAAACACTTACTTGACCACGGTAAAAAGGAAGAGGAAGTCAAATGCCAAACCTTTGAACTGAGACCAGAGGTCGTAACTACCCCTTCTGTTGGTGATTCAAGTCCAAATACAGTTCCGCCCTCAATATATTGTAATGCATACGATACCCCAAAGTCCTACGCTAAAAAATTGAACGTGAACTATCGCTATGCGTGGATTTGTCCTTTGTGTCCACGAGATTACATTCAGCGTCACTCCTTTGTGAAACACTTACTTGAGCACGGTAAAACGGAAAAGGACATCAAAAGCCAAAACTTCGAACTGAGACCAGAGGTCGTACCTACTCCTTCTGGTGGTAATTTAAGTGAAAACTCAGCTCCGCCCTCAATATATTGTAAAGTATCCGATTCGCTAAAGTCCTTCGCTACCAAATTGAATGTGAACTATCGCTATGCATGGATTTGTCCTTCATGTCCGCGACAATATGTTCAGCGTCACTCCTTTGTGAAACACATGGTAGACCACGGTATGAAGGAAGACGAAATTCAAAGCCAAACCTTCGAACTGAGACCAGAGGTTTTAACTACTCCCTCTAGTGATTTATTGTCCTATTGCACTGTCTGCCTTCTAAATTTTAACGATGAAGAATCGTTTGAAAAACATATACAAGAATATCACAAGGACGAGAAAAAACTGCGAATTTATAggttcaagtgccataagtgtggCAAAGTCTGTTCGACTCGTGGCACTCTTACGGATCATGTGCAGCAAGACTGTGGTACAAAGCCACAGTATGGATGCGAAGTTTGCAACAAGAAGTTTTACTCAAGGAGTACCCTACAATTGCACCGATCCATTCATACAGGTGAACTGCCGCACAAATGTGAATATTGTGGGAAGCGGGTGCGAACAAGAGGCCAGCTGACGGTTCACCGACGAACACATACGGGAGAGAGACCGTTCCCTTGTAAGGTCTGCGAACGCCGCTTTACCCATCGGGAAACCCTTATCTCACATCTGTCGCGTCACATAGACATGAAGCGGTACAAATGCGTTGGCTGCGGTACGTGCTTCGCGTCTATTTCTGGTCTCAAAATGCACCGCGAGAATCGTATGGACACATGtggtaaatttaaattcagtGCCCAGGCAGTGGGACCGCGCGTGCGGGTAATCAAGGGAAACGTTATGTTTGAGCCTCAGCCAAAGTTCAATCCATACACGCGCAGTAATGATGACGAACCCGAAGAAGACGAGACTACCAAAGAAAATGGTAGCTTGCAGGAAAACCGCCAACGGGAAAACAATATCGCTGTGGAGGATTAA
Protein Sequence: MDVDFSVIKEEELDIKTEIEDALTTTVPQQELPNGFCTLYKEEPMTEEELNISVSAHPTLSSVPDFQFECHACQSYFSSEELLLDHNCIENLNETSTRTSLRCSDCQQNFTSEKDIISHECKAKLCKNCEQYFETVSKLEDHKQTRCKFRKRCSMCKQVFLTKFFYDNHIQSHINRAKRLSPNLKSNKSLKQPGAEPFVCNVCEMGFKVAKDLLKHYKKHFPAAGVEQHKKGKKLKKNGVNAAIDVDAALPPTNVTKAVDSSNQTLNASAEVDIPQLTPNKSLQNFIPNSPSISLDLNQANLSAALSQVQPITIPHQQGFTFNVQGNTLILNTNLAQPQVSFSPQNVIFDTQGNAFTLTNTISKLQPLHGPQRLDVIVDGLGNAYALTNTLPQFPPQQKPQRLDVIVDGNGNAFVMKKEDLITGDLQYPQIRTLSNQQVLVDAQGNGFALIQNPEVENVRKMANKEITGDLQYPQIRTHSNQQVLVDAQGNDFALIQNPEVPKIEDLTAITKDHCYTSNFSFRNKAPEPVVTAPKAASTDPIPYNDLLLEELFDRKTKSMAKEREAASRSVLPLKQMDVHQTVESETQNIKEEVNIPQTITEELVVETDTTQPSEDYEDMIVCNKVPNSFRKSLIIENLKDQYQKAKKSPDVSSADESSQNSVPRSIYCKVSDSLNSYATELNVNHRYAWICPSCPRQYFQRHSFVKHLLDHGKKEEEVKCQTFELRPEVVTTPSVGDSSPNTVPPSIYCNAYDTPKSYAKKLNVNYRYAWICPLCPRDYIQRHSFVKHLLEHGKTEKDIKSQNFELRPEVVPTPSGGNLSENSAPPSIYCKVSDSLKSFATKLNVNYRYAWICPSCPRQYVQRHSFVKHMVDHGMKEDEIQSQTFELRPEVLTTPSSDLLSYCTVCLLNFNDEESFEKHIQEYHKDEKKLRIYRFKCHKCGKVCSTRGTLTDHVQQDCGTKPQYGCEVCNKKFYSRSTLQLHRSIHTGELPHKCEYCGKRVRTRGQLTVHRRTHTGERPFPCKVCERRFTHRETLISHLSRHIDMKRYKCVGCGTCFASISGLKMHRENRMDTCGKFKFSAQAVGPRVRVIKGNVMFEPQPKFNPYTRSNDDEPEEDETTKENGSLQENRQRENNIAVED

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -