Pmac096408.1
Basic Information
- Insect
- Portevinia maculata
- Gene Symbol
- -
- Assembly
- GCA_949715645.1
- Location
- OX454528.1:134882715-134883107[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 8.3e-08 1.9e-05 26.8 0.0 4 39 19 54 16 59 0.90
Sequence Information
- Coding Sequence
- ATGCCGACTATCCACAAAGCAAATAAGGGCTTGAGAGCAACATGGTTGGAAAGTAATCTGGTTGCTGCATTTAACGAGGTAACACAAAAAATTCTATCAATAAATGCAGCTGCAAAGCAGTACAATGTTCCAGCGACTACCCTTAGAAAAAGGCTTCAGAACGGTGACGTCAAGAAGCATGTTCTAGGTGCTCCCATATGCCATGAAGAAGAAAATGAGCAGAAAATTGTGGCTCACATAAAGAGACTACAAGCGCATGGATTCGCTCCTAACAGAAAAGAGTTGTGCCGTTCGGCATTTGAACTGGCAGACAAATACAAGCCAAGACACAATTTTAATAAGGCTGACAGGACGGCTGGATATGGATGGCTTCGACTTCGACAACACTTGTGA
- Protein Sequence
- MPTIHKANKGLRATWLESNLVAAFNEVTQKILSINAAAKQYNVPATTLRKRLQNGDVKKHVLGAPICHEEENEQKIVAHIKRLQAHGFAPNRKELCRSAFELADKYKPRHNFNKADRTAGYGWLRLRQHL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01253712; iTF_01253735; iTF_01253707; iTF_01253710; iTF_01253779; iTF_01253811; iTF_01253780; iTF_01253720; iTF_01253723; iTF_01253787;
- 90% Identity
- iTF_01253712;
- 80% Identity
- -