Pmac037010.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Portevinia maculata
Gene Symbol
TY3B-G
Assembly
GCA_949715645.1
Location
OX454526.1:53687063-53706896[+]

Transcription Factor Domain

TF Family
HTH
Domain
HTH_psq domain
PFAM
PF05225
TF Group
Helix-turn-helix
Description
This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.2e-09 1.7e-06 30.2 0.0 8 41 744 777 739 779 0.92

Sequence Information

Coding Sequence
ATGCAAGTTGATGACTATACATCAGAAAAAATCTGTTCTCAGTGGAACAATCTGTTGATCAACGATTGGCAGCAAATCGAGTCAACAGAAGGTTTCTGGTGGGAAGTTACAAACTTCACAGATGCAAGTGGAGAAAATCCCTTCCACGACTTGGCTAATTTTGTAATGTCGGTACTGGTTTTACCGATTTCTAATGCCGAAGTGGAGCGAATTTTCAGCCATCTTAATCTAATAAAAACTAAgcaacgaaataaaatgaaattagGGACCAGTGAAATATATATAGAAACCCTATTCAGTGCCATTTGGGAAGCCGTGGACAAGGAGTTAGATCGCTTGGTGGCGGACGAAATTTTGTATCCTGTGAGGTATAGTGCGTGGGCATCTCCTATTGTAGTTGTCGAAAAACCGAAAAGGGGAATTAGATTGTGTGTGGATTGTAAGGTGTCAGTAAATAAGTTTGTAAAAACCGACCACTATCCTCTTCCCCGCGTGGATGACATCTTTGCGAACCTATCAGGCTGTTCGTGTTTTTGCTTTTTAGACTTAAAAGGAGCCTACCAGCAACTGGAAGTTGTGGAGGAATGCCAGGAATTACTAACAATTAACACGCATAAAGGCCTATTTCGATTTCGACGACTAATTTTCGGCATCAAATGTGCACCAGCCATTTTTCAGGCTACAATGGATGAAATACTTAAAGGTATTCCAAAAGTTCGGTGTTATCTGGATGATATTTTGATAGGTGGGGAGTATGAGGGGGAGTGCAAGAGAAATTTGGAAGTTGTTTTAAGTCGGTTGGAGAAATTTAAGGTGAAGGTGAACTTGAATAAATGtcagtttcttaaaaaaaatattgagtaccTTGGCCATGTAATTACACATGAGGGTATTAAGCCAAGCACTGCCAAGTTTGAGGCAATTCAAAAGGCCCCTGTTCCTCAGAATATCGATCAGTTGAGATCCTTTTTAGGGTTGATCAACTATTATTCACGGTTTATTCCTAACTTATCCACCGAGCTCAGTCAATTATATGcactaacaaagaaaaatactaaGTTTGTTTGGTCAGAGAGCTGCAATGACGCTTTCAATAAAAGTAAAGAGCTGTTGTTGAAAAATAACCTTTTAGTTCACTACGATCCGCAAAAGGAAATTGTCCTTCACTGTGATGCCAGTCCTTATGGCATAGGTGGTATTTTGTCTCACGTTATTGACGGTATTGACCGTCCAGTATTATTCACATCCAGTACCTTAAGCTCAGCAGAGAGAAACTATTCCCAGCTGCATAGGGAGGCACTGGCAATAGTCTTTACAGTCAAGAAGTTTCACCGGTATATATATGGAAAGAAGTTTACCATATACAGCGATCATCAATCACTTAAAGAACTTTTTAGTTCTACGAAAGCCGCACCGTCTGTAGCTGCCGGTAGGCAATGTAGATGGGCGATATTTTTGAGCATGTATCAATACACACTGAGGTATAAAAAGGGCTCTCAAATGGCAAACGCGGACGGGCTTTCAAGACTGCCCTTGCCTAATCCGACAAGTTTGGAAAAAATTTCCGTAAACTTCTTGAAACCGTTTATGGCTGATAATGTTGATTTAGAAATGGTTCAAAGAGAAACCACTAACGACAAAGTGCTACAGCAAGTTCAAGAAATGAATCGTAATGGTTGGCCGGTAAAGGCGCCGTCGGAGTTAAGACCATATTTTGTAAGGAGAAATGACTTGAATTATGAAAACAATTGTCTCTACTTCAAAGACCGGGTTATTGTTCCGCAGATTTTAGTTCCTAAAGTTTTGGAAGTACTGCACGAGACGCATGTGGGTATCGTGCGGATGAAGATCCTAGCACGAAGTTACGTTTGGTGGGATGGTATTGAAAAGGATATAGAAGATTATGTACTAGGTTGCGAAATTTGTGCTAGGTTGGATAGCTTTTCAAAATGGATAGATATCAAGATTATGAAAAATACAAATGCCGAGAGCCTCATTGCTACACTGAGATCCATATTTTCATACTTTGGCCTACCAAAAACAATACTATCTGATAATGGACCACCATACAACTCCGAAGCGTTTTTGAGCTTTTGCAAGGGAAACTATATAAGATGTCTCAAAAGTCCGGCATATCATCCACAGTCCAACGGACTCGCGGAAAGAGCGGTGCAAACTGTTAAATCGGGGttgaaaaaaatgttagAAAACGAAGAGAGAGAGAGGCAGGCCCTTCGTGACATAAGAAAGAATACTTTGAGCATAAGAAAAGCCGCCGCAACCTATGGAATTCCTAGGACAACAATTCAAGATCGCCTTCATGGTAGAATTTCTGAAGACGTTTCGAGGGAAGCTGAAGGAATAAGCAAAGCCAGAGCAAATATTTCTGAGGAATCTATACGAAGGTGGTTCTTGGAGCTCACAGAATACCTGAAGAATACAGGACACGAAGATATGATGCAAGATCCGTCTCGGATACTGAATAGGGATGAAACTAGCTTTTGTCTTTGTCCAAAAACAGGCAAAGTTATTGCACCGAAAGGATACAAAAATGTGTATCAAATAAGTACTGCTCACGAAAAAGACACGACCACTGTTCTTATTGTATTTTCTGCGGATCGAAAGATGCTTCCTCCAATGGCAATTTTTCCATATCTTAGACCACCAAAAGATATTGTCAATAGCATGCCAGAACATTGGTTTTTGGGTAGAACCGAAAGTGGGCATAAGTCTCATCGTACAATGGAGTTAAGCCAATTTTGTAGTGAGAAAAATATCATACTCTTTGCTTTGCCACCTAATACCACTCACATTATGCAACCTGCCGATGTCAGCCTCTTCAAGCCTTTAAAGTCTGGTTGGAAACAAACAGTGCATTCCTGGAAAAAAGAGAATCCTGGTGTTATTCTTACTAAGAAATATTTTTGTCCTCTGTTGCAAAAAGCGCTTCTcgAGCCAATAGGCGATTCGAAGAAAATCATTCCTGCTCAAAAGAAGTTAATCCACACCTCAGAAGAACATATACAAGGAGAACCAGATTGCATTCCAGAAGAAGGACCTGACAATGAAGAGGAGGAAAATGCCATATCAACAATCTCGCTTTTGAACGTTACACTAGGTGATATTGAAATACCATCAGGCATCTTTGATATAGACGACGAAGGAGTATTACACATAGCTGAAACGTCAACAAACCGAAAAGAAGatctaaaaataaacaaaataccgTCCTGTTCAACTTCAGATGTCACTGTAACTTCATCACCAAGCGCACGGTCAAACGTGTCACATGCACTAGCGACATACATATTTTATCCCAAACCAATTGGCTTTGAAAGCAAGAGAAAATCCAAAGACTCTACAAGATCTCCAAGTGCTATATCCTCACAAGGTTGGAGGGACATTTTTTTGAACAAAGAGCGGAAAAAGCAACTGGAACAGGGAACTCTATTACAGCGGAAGGAAGAACGTCTGACCAAGAAGCTTCTAAAACAGAAACAACCTAGACGGAAGTCGAAAAGAGGAAATGCACCCAAACAAAGTTCAACAACAGCCACAAAAGCTAAACAAATCTGA
Protein Sequence
MQVDDYTSEKICSQWNNLLINDWQQIESTEGFWWEVTNFTDASGENPFHDLANFVMSVLVLPISNAEVERIFSHLNLIKTKQRNKMKLGTSEIYIETLFSAIWEAVDKELDRLVADEILYPVRYSAWASPIVVVEKPKRGIRLCVDCKVSVNKFVKTDHYPLPRVDDIFANLSGCSCFCFLDLKGAYQQLEVVEECQELLTINTHKGLFRFRRLIFGIKCAPAIFQATMDEILKGIPKVRCYLDDILIGGEYEGECKRNLEVVLSRLEKFKVKVNLNKCQFLKKNIEYLGHVITHEGIKPSTAKFEAIQKAPVPQNIDQLRSFLGLINYYSRFIPNLSTELSQLYALTKKNTKFVWSESCNDAFNKSKELLLKNNLLVHYDPQKEIVLHCDASPYGIGGILSHVIDGIDRPVLFTSSTLSSAERNYSQLHREALAIVFTVKKFHRYIYGKKFTIYSDHQSLKELFSSTKAAPSVAAGRQCRWAIFLSMYQYTLRYKKGSQMANADGLSRLPLPNPTSLEKISVNFLKPFMADNVDLEMVQRETTNDKVLQQVQEMNRNGWPVKAPSELRPYFVRRNDLNYENNCLYFKDRVIVPQILVPKVLEVLHETHVGIVRMKILARSYVWWDGIEKDIEDYVLGCEICARLDSFSKWIDIKIMKNTNAESLIATLRSIFSYFGLPKTILSDNGPPYNSEAFLSFCKGNYIRCLKSPAYHPQSNGLAERAVQTVKSGLKKMLENEERERQALRDIRKNTLSIRKAAATYGIPRTTIQDRLHGRISEDVSREAEGISKARANISEESIRRWFLELTEYLKNTGHEDMMQDPSRILNRDETSFCLCPKTGKVIAPKGYKNVYQISTAHEKDTTTVLIVFSADRKMLPPMAIFPYLRPPKDIVNSMPEHWFLGRTESGHKSHRTMELSQFCSEKNIILFALPPNTTHIMQPADVSLFKPLKSGWKQTVHSWKKENPGVILTKKYFCPLLQKALLEPIGDSKKIIPAQKKLIHTSEEHIQGEPDCIPEEGPDNEEEENAISTISLLNVTLGDIEIPSGIFDIDDEGVLHIAETSTNRKEDLKINKIPSCSTSDVTVTSSPSARSNVSHALATYIFYPKPIGFESKRKSKDSTRSPSAISSQGWRDIFLNKERKKQLEQGTLLQRKEERLTKKLLKQKQPRRKSKRGNAPKQSSTTATKAKQI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-