Pmac099145.1
Basic Information
- Insect
- Portevinia maculata
- Gene Symbol
- -
- Assembly
- GCA_949715645.1
- Location
- OX454530.1:7892531-7893661[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.4e-09 8e-07 31.2 0.0 3 39 17 53 15 55 0.95
Sequence Information
- Coding Sequence
- ATGGTTCGCAACTATGTTAAGAAAACTAACCGACAAGAATGGAGCATAGATGATATGCGACGAGCTATTCAAGAAGTTAAATCAAAGAAAATGAGTTGTAAGGCAGCTGCCGAGAACTATAAAATTCCTCGAACTACCttacaaagatttttaaaaaaagcaaatctaAATCCCGACCTTCGACTAGTTGTCAATAAAGTGGGAAATTTTAAACCTGTATTTAACGTGCATCAAGAGAATGAATTGGCCGAATATCTAAAGGATATGgaagggcgcttgtttggcttttCTATGAAGGAATTTCGAGAACTGGCGTATGAGCTAGCAGACAAAAATGAAATACCCAATAATTTTGACGCTGAAACACGCATGGCTGGAGAAGATTGGGCGCAGAACTTTTTAAAACGCAATGCAACGGTTTCATTACGAAAACCGGAAGCAACATCTGCAGCTCGAGCTATGGGATTTAACCGTGTCTCTGACGgcaatttttttcaacttcTGGAGGAGTGCATCAAGAAATATGGGTTCTTGTCAAATCGAATCTTCAACGTTGACGAAACGGGCATCACAACAGTTGCAAAAAGTCTTGGGAAAATTTTGGCAACAAAAGGCAGAAAACAGGTAGGATCGCTTTCTTCATCGGAGCGAGGACAGCTTCTCACAGTGGAAATTTGTATGAGCGCTGATGGGTCGTACATGCCACCAATGTTCATTTTCACACGTAAAAGAATGAAGGTCGAACTAATGGATGGAACACCTCCTAATTCTTGGGGCGAGTGTAACCAAAATGGTTGGATCacaaaagatttgtttttaaagtGGTTGAAACGATTCATTGAATGGTCGAGGGCAACTAAAGATCAACCCGTTTTGTTGCTGTTAGATGGGCATGCAAGCCACGTTAAGAGCCTTGAAGTGATAGATGTAGCAAGAGCCAATGGTGTGGTCATGCTTTGTTTTCCACCACATTGCACTCATCGGTTACAGCCCTTGGATGGCACTTTTATGAAGCCCTTGAATTCTTACTATGGAGATGAAGTAAGGAAATGGCTCAGACAACACCCTGGCAGAACAGTTACACATTTCCAGGTAGGACAGTTGTTCGGACGTTCGGTAGAGCATATTTAA
- Protein Sequence
- MVRNYVKKTNRQEWSIDDMRRAIQEVKSKKMSCKAAAENYKIPRTTLQRFLKKANLNPDLRLVVNKVGNFKPVFNVHQENELAEYLKDMEGRLFGFSMKEFRELAYELADKNEIPNNFDAETRMAGEDWAQNFLKRNATVSLRKPEATSAARAMGFNRVSDGNFFQLLEECIKKYGFLSNRIFNVDETGITTVAKSLGKILATKGRKQVGSLSSSERGQLLTVEICMSADGSYMPPMFIFTRKRMKVELMDGTPPNSWGECNQNGWITKDLFLKWLKRFIEWSRATKDQPVLLLLDGHASHVKSLEVIDVARANGVVMLCFPPHCTHRLQPLDGTFMKPLNSYYGDEVRKWLRQHPGRTVTHFQVGQLFGRSVEHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01253572; iTF_01253774; iTF_00693697; iTF_01253571; iTF_01253575; iTF_01253577; iTF_01253646; iTF_01253585; iTF_01253600; iTF_01253619; iTF_01253612; iTF_00693689;
- 90% Identity
- iTF_00693697;
- 80% Identity
- -