Pmac064391.1
Basic Information
- Insect
- Portevinia maculata
- Gene Symbol
- -
- Assembly
- GCA_949715645.1
- Location
- OX454527.1:36146649-36148065[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 9e-13 2.1e-10 42.7 0.0 3 43 288 328 286 330 0.91 2 3 0.29 69 5.8 0.0 27 37 359 369 350 374 0.87 3 3 1.8e-16 4.2e-14 54.5 0.0 3 44 397 438 395 439 0.94
Sequence Information
- Coding Sequence
- ATGAACCACCTTAAGTGGATGGGCCATACGGCGACTATTCTTGACATTCAAAAGACTCTCAAGAACGATGCAGCCACTTGTGATATTACACTTTCCTGTCGCGGTAAATCGGCGAGAGCACATCGCTTCGTACTGTCATCTTGCAGTGACCTACTACGCGATCTTCTGAGTGATGTGCCTATTGGACAGGAAGCAACCATAATAGTACCTGACGTCAAAGGCAGTCTCTTGGACAGTGTACTGGGTTTCGTGTACATGGGTGAGACAAGTCTGtcgtcgacaaacttgtccgaGTTTCTAGAGGCTATCAGTATTCTCGGCATAAAGAGCGCCATTAGTTTCGAATGTGCCAACAGCAATTCGGTTAATAACAGCAAAAATGTTGCCGAAATGACCGAGATGGAGGAGGAGCTAATGGAAGCTGAACCGGACCACGAAATAGTCGAAAAGGACGATGAAGagGATCAAACAGCTGCAGAAACGAACAGTGTTCGCGAATTAGAATTTCTCGAGGTCTACAATGAGCAGGAAAAAATCAGCTACACAATTGAGAATATCACACCGACAAATCCCAACGAGTATATACTGACGGAAAGCTCCGGGACCTTTACCCTTACACCGAATGCAAAAATCGATGGCAGTGAAGTTGGCGCTCTTGTCGAGAAACAGGAAGAGGATAGTCCCATGATGGAGCATTATGTGGGTGACCCAATTGGTGACAGCAGCCAGTGTTCCAGCGCCGACATGAAAGATGAAAAATGTAGCAAGAACCTGAAAGATGAATTTAGTGAATTTCAGGCACTTAGTCCGGAGGACTCGAAGGGATATCAAAACTTCAATGAAACCCAGTCAGCCCGCGTCGAAGCACTCGAAAACGCTGTCCTCGCTGTGGTCGATGAAGGTATGAGTCTGCAGAAAGCCGCCATcaagttcaatatttcaaaaacagttCTCTGGCGCCGAGTGAAAAAGCATCCGCTATACATGAAGACCACACGTGAGAATCCCGTCATTACAGCAGCATGTGAGCGCTTGAAAAGCGGCGACTCACTGAAAAGTATTAGCCAAGCTCTGGACATTCCCATGTCTACCTTGCATCGGCACAAAGTAAGACTGGCACAGGAGGGTCGACTGCCAGAGTACGTGACTTTTAAGAAACGCGGTCCAATATCAAAAGAAATGCTAAAGGAAAAGCTATCGAAGGCAGTACAAGCTTGCTTGGGCAATGGAATGTCCCAAAATCATGCGGCAAATGTTTTCGATGTGCCAAAAAGCACATTGTGGCgacatttgcaaaaaaaaatgagcCGCTCAGATGGCGGAAACGGCGTTAGCATCAAGGAGGAAGTTGTTTTGCCCTAA
- Protein Sequence
- MNHLKWMGHTATILDIQKTLKNDAATCDITLSCRGKSARAHRFVLSSCSDLLRDLLSDVPIGQEATIIVPDVKGSLLDSVLGFVYMGETSLSSTNLSEFLEAISILGIKSAISFECANSNSVNNSKNVAEMTEMEEELMEAEPDHEIVEKDDEEDQTAAETNSVRELEFLEVYNEQEKISYTIENITPTNPNEYILTESSGTFTLTPNAKIDGSEVGALVEKQEEDSPMMEHYVGDPIGDSSQCSSADMKDEKCSKNLKDEFSEFQALSPEDSKGYQNFNETQSARVEALENAVLAVVDEGMSLQKAAIKFNISKTVLWRRVKKHPLYMKTTRENPVITAACERLKSGDSLKSISQALDIPMSTLHRHKVRLAQEGRLPEYVTFKKRGPISKEMLKEKLSKAVQACLGNGMSQNHAANVFDVPKSTLWRHLQKKMSRSDGGNGVSIKEEVVLP
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00311727;
- 90% Identity
- iTF_00310168;
- 80% Identity
- iTF_01254095;