Basic Information

Gene Symbol
JARID2
Assembly
GCA_949715645.1
Location
OX454527.1:125269526-125277836[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.5e-22 9.1e-18 67.0 0.0 6 89 1657 1738 1652 1738 0.92

Sequence Information

Coding Sequence
ATGTTCGTAAGCGGTAAAAATGTATGTGAACTTATTGATTACGTAAAACTGGACTTACACAACCTGTGTTCATGGTTACAaACCAAAGTGCAAGCTCAAAGGAAATTTGCTCAAGGCCAAAGCGCGCCAGCATCCTCTTATAGCTCTGCCATAGCTTCTTCATCCACGGCGGCAGCTGGGGGCAGTACATCTTTAAGTAACTCGACAACGCAAGAAAATCGAGAACCCCCAACAGAAGTTTTACCCAATAAAAGGCCGAAAACTGAAGATTTCCTAACATTCCTTTGCTTTCGAGGTACATCAGCACTGCCTGCTCATTTAGATTTTCTAAATCAAAACACACCTCAATCCTCAAAAGTTGAATCTCCAGTGAATCCAATTGAAAACGCAAAAGATGAAGACTCTCCGTCAAAAGCTAATGTCCAGAAATCGACAAGATCAacggcaacaaaaaaaaaggaaaaaggtgTTACGGTGGAACAAAGTTTAACATCGGCGGTAAGCGCTAAAAAAACAGAAACCAAAAAATCAACTGGAAAAAGGAATGATGAAGTAAGAGACGGAAAGGTCATGTCATTTGCTGTCCGAAAAAGGGCAGAACAATTTCCCGAAGGCAATCGGCGTGGAAGACCATCAGATAAACCGAGGGAAAAACTGAACAAATCTGCAGAAGGTAGTCGTCGATCTTTTCGTAACAGGGACACCAACAAAACCTTGGCGGAGCCCGATGATAATGAAAcggaaaattttgattttgaaactgCATCAATCGAAAGTGTTAAAGATGCCgtgaaaatagaaaaaactcACCAAAAAGGCAAGCGACCAAAGTCTGCGAATTCGACTAAGAAAAAGATTGACACCAGTGCGACTGCAACTACTGAAACTGTTCAAAGTCAAGATCTAACAGAAAAAACAGATCAAGAATCTAACCCCCACGCAAAACTGACTCAGGCAAAAGAAAAACCAATAATAAAAAGACCGCGTCAAAGGGAAGCCCCAATATTTGTTCCATCACCAGAGCCAACTGGACGAATGACGCGCCAGAGAGCGTTTTTTGAACCAGTAAAAGTAATACGCCTTTTGGAAAATGACGATAAAAAGGAAACCGAAGACTGCGAAGTTTCTGATAAGCAAAAAGAACGCGATGAAATCAAGATCAAAGAGCTGCCGATTTCAATTGTGACCCAAAAAGATGAAGAATTTTCATTAGGCAAAGATGTTTTTGAATTCTCATCTGAAGACGAACAGCCTCTAGCAAAAGCGATTAAACTTAAAAACACAAAAGCTGTATCAGCAAGAAAGTTGTCACCCAAAAAGCAGCAGAAGACTATTCCCAAAGATAAGGCAGCTATTCTAATGAGTAAAGATGTAAATTcccaagaacaagaacaactaACCAAAATTATTGACGAAATTCCAGAAAAGATCGAAGAGGAGGATAAGGTAATCCTCGAAAAAAAGCCAGCTGGAAGAAAGCCTAAGAAAAAGACAGTCGAAGAGCAAAGCGTTATATCTGAGAAAAGCTCCAAACACTCAACTgaatttgcaaataaaaatttcaaaccgatggacaaagaaaaagaaatatcagAAGAAAGTGATGTAAAGGCAAAGCCAACAAACGCAGCATCTCGACCAAAAAAGAAATCTTTAACAGTTCAATCAACACTCAATTCCCAAATCGTAGTTGCCTGTGAAAATGAAACTCGAAACATACGGCCCAGCAGAAAAACGAAAGAAGCTGCAACAATTTATATGGGAATCATCGGCCAGAAATTACAACAGGACGAATATGAAGACGACGAATTGTCTCTTAATAGTTTTCCAGATCTGCCAAATGTTAAAGAAATGGAAAAAATGGAAACAGAACTAAAAAAGAACGTCAATCAAAACAAGCAGTCGTGCAAGCAAACTGATGTGCTAAAAGCAGATGGGAAACAGTCAAATAAGATTATTGAAAAGCCGCCAGTAAGAAGAGGCCGGCCGCCGAAGACTGCTGCTGTAAGAAATGCCAAACTAAAACCCGTCAAACCTCCTCAAATAGAAGGGATGCTACGAAAAAGAGAGGAGCCGAAACTGTCGAGAgacgaaaaagaggatgaaGAAGATTTCTTGCTCAACGAGGAAGTCAATGAGACAAAAAGAAAACTCGAAAAGAGTTTTAGTGATTCCGACGACGAACCACTTGCTATTAAACTAACGAAGAATAGCGAAAAGGACTccgaaaattcaaagaaatcggaCATTCCCCCAGTGATAAAACTTCCAACGTCAAAAGATGATCGGATTAAGGATTTAAAACCAGCGCCAAAAATGGTAAATCTTTTGCCATTCACAACACCAGGAACCCCATTGCAGGGCAGTGTTCCAACTTCTACACCTCTGCATTCTGTTTTGTCAGAGAACAAACCCAAGTTTGATGATAAACCAAAATTGTCAAACCCTCTGACTTCTACAGCTCCACCTTTTACACCGAGACAGCCTATCATCAAGAATCCTCAAACCCAACCGTCGCCGCATCCACTGCTCCCGACTATTAAATATCAAACTCCGCCGACAACATATCCACCCCCAATTGAAGCATATCCATCTCCAAAAATTAACCCAAACTTCCTCACTCCGAAATTCGATCGAAACATAGATCGACGCATAGTTTGCCTCGACGGTTCCTCATCGCTGTCAACTCTTCAGAGACCAAGTAACAGTTTTCCGTCACCGTCTCCAGTAAAATTTGATATGTCCACTCCGAAGACACCAAGCACCTCCAATGCAAAGATTCCTATTGTGCCATCTACAACATCTTCAAATGCCGCATCTGCTGATCCGCTTAAAGATGAAATAGGCAGCATCTTAGCAGCTAACTTAATGCCAAGCAAAGAGGAGTCAGGTAAAATTTTTGGAATTGCTAGTGTCAGCTTAGCACAAAGCTCTGGTCCAGATAACACCAAGTGTACACTGGGTAAATGTGGATCGATCCACAAGCCAGTATTAGGCCCTGTAGTTCCAACGGAGTCCTATTTAGGTGAACAACTTTCTAGCAAAGAGAGACGAAAAGCCAAAGTAAACATGACACATGAGCAGATACAGAAATGGTTGATTGAATGCTCCTCGAACCCCGATGAGATTCAAGATGACTTAGATGATGACTTCGATGACAACTTGCGCCCAAATATATACACGACAACACCACCTCCTACCAGAGATGACAAGGAAAGCACTTCATTTAGTTCTTCATCGAAAACTACCAGAGATCTGGGTAAAAGCGAAAGCGCCTGGTCTGGCAAAGGCCCTTCGCTGAAGGCCACCCCAGTGGTCGTGCCTAAAGATGATCAGCGACCAGAGGAATGTTCTCTATCATCAGATGCAGCAAACAAAGATTTAAAAGAAGTTGCTAAGGACTACCAGGTACAAAAGATCACAACTGTAGGTAAAAAAAATGACGCAGCCACTAAATCAAAGGAGAAGAGTAAATTAGACAAAGCGAAGGAGGAGaacgaaataaagaaaatacagGAGAAGTTGACAAAGAATGGAGGACAGCAGAAAGGTTCAAAACCGTTGAATATGATGAACGCAGCAGCTTCTACGTCATTACCtcgacaacaaaaaaaagttgatgaaGTTAAGAGCAATTCTACACCAGCCCAGTCTACTAAAACGGTGACGGGTTCGCCAGCAAGTGCTGCTAAAACGCCAAAACGAACAACTGTATACAATTCTAAACTAAAGGAATCCACAACCACgagtcataagaaaaaaacccCTTTTCCTTACACCCTTGGAGCCTTTTCGGCGGACAATGAGAAAAGTATATATTCGTTCGATAAAGAGGACGACGACACCAAATTACCATTATCAAAACCGTTTCGTAGACAAAGTCGTCGCGAATCGCACACAGACGATGCAGTCGAACAAGATCTGCCATCACAGACGAACGTGTCTGACAAGAAAAAAGTCAACGCATCGCAAACCAGCGTATCTGTTACACTTAGCCCGGATGAAAACATTAAGCTTGTTAAGGTTAGTCTTGAATCGGAGCAAAGTCAGCCAGCGGAGGCTACCGATAAGACTAACGAAATTAATTTGGGAGATTCTGATTCGGATGTTCACACGTTCTACATACCCCTTCAAGGAGCAGGTGCTGGAGGTTGCGGCGAAAGTAAAGCGGACCTAATTCAAGGTGTTGCTGTTAAACTAGGACGAGAAGGGCCCGATGGACCCAATCAGAAAGTTGTCATGCACGCTACTTTAGTAACAAAATCGCAGATGGGATCGAACTCAAAACCGCTTCCTGATTCTATGAATGTATCCGAAATAGTTAAAAATCTTCTCAGCTCTGCAACTATGACAAATAGTAAAGATACGACGTCTGGAGCAGCAATAACAGTTTCGGCAACCTCTGCTTCAGTAACAAGCACCACTACAGTAGCTGCTCCGCAGCAGAATACATTAAATGTACAACATACAACGGCAGGAACATCTTCTTCAGTGGCAGTTGGCAGCTCAAAGAGTGTACCTGTGGGCACCGTGCAGCCTAGATTTAAATCTACGGAATCTGCTGTCACCCAGTCAAATCATCCATCTGGTTCGGTTGGTGGTGGTTTAACGCGGGTCAATTCAAATTCGTCTCTCTTTTCCGGATCAAATAAATCTCGCGGTCAATCCAGTAAGAAGATCAAAGACGATACACCTataaaaatgtgcaataatacAGCTTTTCCCCGTCACGACGATCCGACGCAAATGGTAGAAGCTCCAATTTTCCGACCAACCGAAAAAGAGTTTCAAGATCCCATGGAGTTCATTGATAGGATTACACCGATTGCAGCACGTTTTGGCATCTGTAAGATAATACCACCAGCAAGTTTTAAACCAGAATGTAGAGTTTCTGATGATATGCGATTTACCGCCTACAATCAGTACGTGCACAAGATGCTCCACCGATGGGGTCCCAGTGCTAAAGAACTGAGTGCAATTAAGAAATATTTGGCTACACAAAGCATTGTGATGAATCACCCGCCGTGGATTGGAGGTATGGAAGTGGATCTACCCCGGCTTTATCATACTGTCCAGGAATTAGGTGGTCTCAAAGaagttatcgaaaaaaaaaaatgggcccgTGTAGCAGAAGATATGTGCATTCCTAAGTTAGCGCAGGATCGCGTAACTAAACTCGACGACATTTACTGTAAATATCTTCTTCCATACGACACGTTATCGCCCATTGAAAGGCAGAAACTCTTTGACGAAGTGGAAGCCGACTGGGCGAAGCGCGAGGCTAGAGCAAGACGAAATGCCGATCGTTTTGTCAACACTGAAAGCGTAAGTAATGAGGACGATGAGGTATCGAGCGAAGATGACGAAGAGTCTGAGGAAGAAGTTGACGGTGTATCCATGGAATGCATTGTAAAGGGTCGAAGTATGCCACTTAGCCAGTTCTTCCGAATTGCCAGAAATACAATGTCTTTGTGGTTTAAGAATACAGAGCCGTCTGTGACTGAGGTGGAAGCAGAGTTCTGGCGCCATGTAGCTGTTCGTGATAGCCATGTTTGCGTCCATTCCGGATCGATTGATTCCAGCGGATGGGGATACGGATTTCCATCCCCGGGACCAAAGGGGAAAGGATCAGTGTGTGCCCGACATCCGTGGAACCTGAAAGTGTTGACAAACAATCCGGGATCTGTTCTGCGGTCATTGGGACCGGTAATGGGTGTGACTGTCCCAACACTACACGTTGGTATGCTTTTCAGTGCATGCTGCTGGTATCGTGATCCGCACGGACTTTCTTGGATTGAGTATCTACACACTGGTGCGAGTAAATTATGGTACGGAATTCCCGATGATCAGAGTGCAAATTTCCGATCAGCACTTACTTCACTCATCCCAACGCATTGTCAAAATAAGACAATTTGGCTTCCTTGTGATACGGTGATGGTACCACCTCACATGCTCACTGACCGTGGAGTATCTTTGTGCCGAATAGAACAAAAACCTGGCGAATATGTTGTGATCTTCCCAAGGGCCTATACATCGAGTGTTGCAACTGGCTATGTTGTTTCAGAAAGTGTATATTTTGCTACAAGTTCTTGGCTTGAACTTGGTAAAGATGATTTTAGAGATATTCACGACAGTTGTGAGCCGGCCATGTTTTCCTTGGAGCAGTTGCTATTTGCTCTGGCTTCAGATCAGCGGGTAACACTAGAAGTGCTTTCTCAAATGCTACCTATGATAAATGAGGTGTTTGAAAAGGAAGTTGCGGCTAGAGAACAGCTCAAGGTAGGAcgaaattttaattacaatgtTTATTTTATCAACTATCAGACTCGCTCGGCTTCGCTCGAGAAACGAAACTTCAGTTAG
Protein Sequence
MFVSGKNVCELIDYVKLDLHNLCSWLQTKVQAQRKFAQGQSAPASSYSSAIASSSTAAAGGSTSLSNSTTQENREPPTEVLPNKRPKTEDFLTFLCFRGTSALPAHLDFLNQNTPQSSKVESPVNPIENAKDEDSPSKANVQKSTRSTATKKKEKGVTVEQSLTSAVSAKKTETKKSTGKRNDEVRDGKVMSFAVRKRAEQFPEGNRRGRPSDKPREKLNKSAEGSRRSFRNRDTNKTLAEPDDNETENFDFETASIESVKDAVKIEKTHQKGKRPKSANSTKKKIDTSATATTETVQSQDLTEKTDQESNPHAKLTQAKEKPIIKRPRQREAPIFVPSPEPTGRMTRQRAFFEPVKVIRLLENDDKKETEDCEVSDKQKERDEIKIKELPISIVTQKDEEFSLGKDVFEFSSEDEQPLAKAIKLKNTKAVSARKLSPKKQQKTIPKDKAAILMSKDVNSQEQEQLTKIIDEIPEKIEEEDKVILEKKPAGRKPKKKTVEEQSVISEKSSKHSTEFANKNFKPMDKEKEISEESDVKAKPTNAASRPKKKSLTVQSTLNSQIVVACENETRNIRPSRKTKEAATIYMGIIGQKLQQDEYEDDELSLNSFPDLPNVKEMEKMETELKKNVNQNKQSCKQTDVLKADGKQSNKIIEKPPVRRGRPPKTAAVRNAKLKPVKPPQIEGMLRKREEPKLSRDEKEDEEDFLLNEEVNETKRKLEKSFSDSDDEPLAIKLTKNSEKDSENSKKSDIPPVIKLPTSKDDRIKDLKPAPKMVNLLPFTTPGTPLQGSVPTSTPLHSVLSENKPKFDDKPKLSNPLTSTAPPFTPRQPIIKNPQTQPSPHPLLPTIKYQTPPTTYPPPIEAYPSPKINPNFLTPKFDRNIDRRIVCLDGSSSLSTLQRPSNSFPSPSPVKFDMSTPKTPSTSNAKIPIVPSTTSSNAASADPLKDEIGSILAANLMPSKEESGKIFGIASVSLAQSSGPDNTKCTLGKCGSIHKPVLGPVVPTESYLGEQLSSKERRKAKVNMTHEQIQKWLIECSSNPDEIQDDLDDDFDDNLRPNIYTTTPPPTRDDKESTSFSSSSKTTRDLGKSESAWSGKGPSLKATPVVVPKDDQRPEECSLSSDAANKDLKEVAKDYQVQKITTVGKKNDAATKSKEKSKLDKAKEENEIKKIQEKLTKNGGQQKGSKPLNMMNAAASTSLPRQQKKVDEVKSNSTPAQSTKTVTGSPASAAKTPKRTTVYNSKLKESTTTSHKKKTPFPYTLGAFSADNEKSIYSFDKEDDDTKLPLSKPFRRQSRRESHTDDAVEQDLPSQTNVSDKKKVNASQTSVSVTLSPDENIKLVKVSLESEQSQPAEATDKTNEINLGDSDSDVHTFYIPLQGAGAGGCGESKADLIQGVAVKLGREGPDGPNQKVVMHATLVTKSQMGSNSKPLPDSMNVSEIVKNLLSSATMTNSKDTTSGAAITVSATSASVTSTTTVAAPQQNTLNVQHTTAGTSSSVAVGSSKSVPVGTVQPRFKSTESAVTQSNHPSGSVGGGLTRVNSNSSLFSGSNKSRGQSSKKIKDDTPIKMCNNTAFPRHDDPTQMVEAPIFRPTEKEFQDPMEFIDRITPIAARFGICKIIPPASFKPECRVSDDMRFTAYNQYVHKMLHRWGPSAKELSAIKKYLATQSIVMNHPPWIGGMEVDLPRLYHTVQELGGLKEVIEKKKWARVAEDMCIPKLAQDRVTKLDDIYCKYLLPYDTLSPIERQKLFDEVEADWAKREARARRNADRFVNTESVSNEDDEVSSEDDEESEEEVDGVSMECIVKGRSMPLSQFFRIARNTMSLWFKNTEPSVTEVEAEFWRHVAVRDSHVCVHSGSIDSSGWGYGFPSPGPKGKGSVCARHPWNLKVLTNNPGSVLRSLGPVMGVTVPTLHVGMLFSACCWYRDPHGLSWIEYLHTGASKLWYGIPDDQSANFRSALTSLIPTHCQNKTIWLPCDTVMVPPHMLTDRGVSLCRIEQKPGEYVVIFPRAYTSSVATGYVVSESVYFATSSWLELGKDDFRDIHDSCEPAMFSLEQLLFALASDQRVTLEVLSQMLPMINEVFEKEVAAREQLKVGRNFNYNVYFINYQTRSASLEKRNFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00314052;
90% Identity
-
80% Identity
-