Pjap022281.1
Basic Information
- Insect
- Popillia japonica
- Gene Symbol
- ZBTB2
- Assembly
- GCA_004785975.1
- Location
- SMLS01061141.1:2293-9395[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 30 0.004 0.6 11.4 1.7 2 23 45 67 44 67 0.91 2 30 0.0081 1.2 10.5 0.1 1 23 107 129 107 129 0.94 3 30 0.01 1.6 10.1 4.1 1 23 135 157 135 157 0.94 4 30 5.4 8.2e+02 1.6 0.2 1 10 163 172 163 177 0.85 5 30 0.00031 0.047 14.9 1.6 1 22 182 203 182 203 0.95 6 30 0.027 4 8.9 5.2 1 23 254 277 254 277 0.91 7 30 0.00025 0.037 15.2 3.8 1 23 370 392 370 393 0.95 8 30 0.019 2.8 9.3 0.8 1 23 449 471 449 471 0.83 9 30 4.3e-05 0.0064 17.6 0.6 1 23 506 528 506 528 0.98 10 30 0.00027 0.041 15.1 0.8 1 23 596 618 596 618 0.96 11 30 0.00016 0.024 15.9 2.3 1 23 649 671 649 671 0.95 12 30 0.002 0.3 12.4 0.3 1 23 697 719 697 719 0.97 13 30 0.00027 0.041 15.1 0.8 1 23 791 813 791 813 0.96 14 30 1.8e-05 0.0027 18.8 2.7 1 23 844 866 844 866 0.97 15 30 0.0019 0.29 12.5 0.3 1 23 892 914 892 914 0.97 16 30 3.9e-05 0.0058 17.8 1.3 1 23 986 1008 986 1008 0.96 17 30 0.00024 0.035 15.3 2.3 1 23 1031 1053 1031 1053 0.96 18 30 3.1e-05 0.0047 18.1 1.5 1 23 1063 1085 1063 1085 0.96 19 30 0.00018 0.027 15.7 2.9 1 23 1119 1141 1119 1141 0.98 20 30 2.6e-05 0.0039 18.3 1.3 3 23 1177 1197 1175 1197 0.97 21 30 4.7e-05 0.007 17.5 5.4 3 23 1233 1253 1231 1253 0.95 22 30 5e-05 0.0075 17.4 0.8 1 23 1283 1305 1283 1305 0.98 23 30 9.7e-06 0.0015 19.7 0.3 1 23 1334 1356 1334 1356 0.97 24 30 0.0011 0.16 13.3 4.8 1 23 1391 1413 1391 1413 0.97 25 30 0.0039 0.59 11.5 4.8 5 23 1433 1451 1432 1451 0.93 26 30 0.00036 0.054 14.7 0.1 1 23 1469 1491 1469 1491 0.97 27 30 1.4e-05 0.0021 19.1 1.0 1 23 1549 1571 1549 1571 0.98 28 30 1.8e-05 0.0027 18.8 1.7 3 23 1658 1678 1657 1678 0.97 29 30 6.4e-05 0.0096 17.1 0.7 2 23 1797 1818 1796 1818 0.95 30 30 0.00053 0.079 14.2 0.2 1 23 1828 1850 1828 1850 0.96
Sequence Information
- Coding Sequence
- ATGCAAGAAACGATTACGTTTCTATTCTACACTTATAAGTACCTAACCATTTTATGTTTCAGAGACCAACACGAAGTTGAATTTAAATCAGTTCTGCCAGACATAAAACAAGAAGACGAATATTGGCTGTGCGTCTGCAATGATTGTCACGAATTCTTCGATTCTAACGAATTATTAGAGACTCACAAGTTAGCGCCACATTTTGACAGGAATTGTCCATCTAACGAAGGTGCCGCCGCCTGTAGTATTGATATAGAAGACAAAACAGCTCTCGCAGATGAAAACAAACCCGTCATCGGCAATCACCGCAGTAAACCGTTTAGTTGCATAGTATGTGGCAAAGGTTTTGCATGGAACTATCTTCTAAACATCCATATCAGAAGACATACTGGAGAAAAGCCGTTTGTATGCAGATACTGTAATCGAGAGTTTGCCCACAAGAACTCTTATAGAGCGCACGAACATGCACACAGAGTCAAGAAAGATTTTGCTTGCGAGCAGTGTGATATGAGCTTTCTGCGACAACATACTGGGGAAAATCCGTTTAAATGCGAACAGTGCCATCAAGAATTCAGCGAACAAAGCCATCTTGAGGAGCATGCgaaaaCTTCCACGTCGAGCTTGGACAGATTGGATACTTACCAGGAAGAAAAACTTACCATCACAGCAACTCGGCTGCAATATACGTCAGTAGAACCGTCATCACCCGTTCACCATTCGAGCTCGGATCAGGAAGACGACGGAACATCATACTGgcttttcttttgtaataagtGCCATACGTTCTTCGATTCCAAGGAACATCTGGCGTCTCACAAGACGGAAATTCATTTTGAGGGTACCTCAACGCTTGAGAATAGAGCTAACGATTGTGACAATACTGATTCCGAGTGTCAGCCCAGTACTGTTGCCTCTAGTGCAAATACATTGAAAGGCTCCGATTTCCAGAATATCCGCTATAGGTCTAAACAACAAAGAATACGCCTTGCACAGCGCAGAGATTTACAGAAGCATGCAAGACATCATGCGGGTCTGAAATATCGGAAGCGATTTAGGGGGAAAGGATatctaataaaacaaaagcTGAAGCATTTAAGACAGaaactttttatttgcaaaGTGTGCGGTAAACGTTTTGCCCAAAGAAATCATCTAGGTCTTCATAGTAGATCGCACCACGCAAGGAGGCCGTTTAATTCCGGCTGTGATCACAAAATACACTCAAGGAAAAGTGACCTTGAGGATAACGAAACTGAGTCGGTGAAGCCTGACTCTAGCCAAGAAAAATTCACAGGTATAAATGATGTTATCCAGAACCAAACAGTGGAAACGCAAGATAAGTCTTTCATATGCGAACTGTGCGGCAGAGGTTTCACACGCAAAAATTATCTTGGTTTTCACTCCAAAGTACACAAGAAAGATGCATCATTCAAATctagcaatagccaagaaatacTAACAGAGGAAACAAATATTGCGCTGCATGAAAAAACCAATACCAGCATAGGGAAACCCTTCATTTGCGAAGTGTGTGGTAGAAGCTTCACACTGAAACGTTTTCTCGCGAATCACACCAGAGTGCACAAGAGAGAAGAGTCCTCTAGCAGTGATTATAGCCAGCAACTGTGTACAGAAAAGTCTGATTTAGAGAAACGTGCAACATTTCATAGAGATGAACGTCAATTCCTCGAGCATGTTAGCGTACACAAGAGCGATACATCATTTGAAAGTGAGTATAGCCAACAAACATCTACAGAAGAGAATGGAAATATAGGAGAAAAGCCGTTCACATGCGGAGTGTGTGGTAGAAATTTTAAACGAGAACATTATCTTGCCCTTCACGCCACAGTACACGAGAAAGATAAGTTATCCAAATCTGGACATAGCCAGGAAGTGCTTACAGAGGCAAATTATCTTGAACAACTGGACGTAATTCCTAAGGTTTTCAATTGCGAAGAGTGCGGTAGGAACTTCAAACGGAAGTATTGTCTTGCTGCTCACTCCACGGTACACAAGCGAGATAAGACACGTGAAGCTGGCTATAGCCAACAAATTCTGCATAAAACAGTTGATATCGTAAAGAAACCCTTCAGTTGCGAAGTATGCGGTAGAAGCTTCGCACTGAAACGTTTTCTCGGCACTCACGCCAAAATTCACAAGAAAGATAAATTGGTTGAAATTACCCATAGCCAACAAATGCTATCAGAAGAAACTCATGTTGAGTCTGATATACAGCAGGGTGCAGCATTTCATACTGCGGAACGTCAATTCCTCGAGAATGTTTCAGTACACAAGAGCGATAGATCTTTTGAAAGTGAGTATAGCCAAGAAACACCTACGGAGGAAAATGGAAATATGACAGAAAAGCCGTTCACATGCGGAGTTTGTGGGAGGAACTTTAAACGGGAACATTATCTTGCCCTTCACGCCACAGTACACGAGAAAGATAAGTTATCCGAACCTGGACATAGCCAGGAAGTGCTTACAGAAGCAAATTATCTTGAACAACTAGAAATAATTCCTAAGGTTTTCAATTGCGAACAGTGCGGTAGGAGCTTCAAACGGAAGTATTGTCTTGCTGTTCACACCATGGTACATAAGCGAGATAAGACACGTAAATCTGGCTATAGCCAACAAATTCTACATAAAACAGTTAATATCGCAGAGAAGCCCTTCAGTTGCGAAGTATGCGGTAGAAGCTTCGCGCTGAAACGTTTTCTCGGTACTCACGCTAAAGTTCACAAGAAAGATAAATTGGCTGAAATTGCCCATAGCCAACAGATGCTATCAGAAGAAACTGATGTTGAGTCTGATCTACAGCAGGGTGCAACATTTCATACAGAGAAACCTCACTTCCTTGAGGATGTTAGAGTACGCAAGAGCGATAGATCTTTTGAAAGTTATTATAGCCAACAAACACCTACagaggaaaatgtaaatatgacAGAAAAGCCGTTCACATGCGGAGAGTGTGGTAGAAATTTTAAACGAGAACATTACCTTGCCCGTCACGCCACAGTACACGAGAAAGATAAGTCATTCGAATCTGGGCATAGCCAAGAAGAACAACCGGAAGCAATTCCTAAGGTTTTCAATTGCGAACTGTGTGGTAGAAATTTCAAACGCAAGTATTGTCTTGCTGTTCACTCTATGGTACATAAGCGAGTTCAGACGGGACACAAACCCTTTAGTTGCGAAGTGTGCGGTAAACGATTCAAACTGAAATACCATCTTACTCTTCATGCCATAATACACAGTAGAGATAATTCACAGGATTCTGCATATAGacaagaaatatttacagagaATAGCAATCGGGTGCTGTATGAAACAGTTCCTACAGGAGATAAACCGTTTAGTTGCGAAGTGTGTGACAGACGCTTCAAACTAAAATACCATCTTGCTCTTCACTTTAGAGTGCACAGAAAAGATAAGTCAGATAAATCTGAATATAGCCAAGGAATAATTGCAGAAGAAAGCAATCATATGTTGTACGAAACAGTTCGTACGGGAGAGAAACCGTTCGGTTGCGAGGTGTGCGGTAGAAGTTTTGCATATAAACGGCATCTCACCAAACACGTCAAAGCTCACGAGCAAGATAAGGTGGTTGAAACTGACTATTTCCAACAAATGCTTACAGAGGAACCTAGTCTTGTGCaacataaatcaatttatacgAGAGAGAAACCTGTTTGTTGCGAAATATGCGGTAGAAGTTTCACACGGAAGTGCCATCTTGCCAATCACATCAAAGCACACATGAGAGAAAAGTGCTTTGTAGCCGACTTTAGCCAAGAAGAAACTGATACTAAGGAGAATGTGTTAGCTGATTCCGCAAAGAGACGTTTCAGTTGCGAATTGTGCGGTGAAAATTTCCCAGAGAAAAGTCATCTCGATAACCACACCAGAGTACACAGGAGGGATAATTCATTTGGAACTAACTACAGCCAAGAAAGTGGTCTTGCACAGCCAGAACCAATTCCTACGATGGAGAAGCCTTTCACTTGTGAACTGTGCGATAGAAGCTTTAAACGGAAGTATGACCTTGCCCTTCACGCTATAGTGCATAGAAGAGACACGTCATTTGAACCTGTGCCTTGTAGTCGACGATTATTAACAGAGGACTCTGTCATTGTGCAACACGAAACAATTTCTTTGGGAGAGGATCCTTTCAATTGCGAGTTCTGCGGTAGAACTTTTCCGCAAAAGTGCCATCTTGTCAGTCACAGTAAAGTGCACACGGGAAATGTGaagactaaaaaaaaatctacagcGAAAAAATCTTTAGTTTCCAAATTCTGCGGCAAAAGATTCAAACAAAAACATCACCTGGCACGTCACACTTCTGAACACGAAAATGAAAAGTCGTTTGAATCTGAGGCAACTGATACAAGCGATACACTTTTCAGTTGCGCACTATGCGGTGAATCTTTCCCGAAGAGAGCTTATCTAGTCAATCATGCCAAAGTACACATAGAAGATAAATTGTTTGAGTTTGAAGGTAGCCAACAAACAATTAAAGAGGAAATCGATTTAATGCAGCATGATGCAATTTGCCCAGGAGAACAGTCTAGCAGTCGCGAAAGTTTACCGGAAAAAGATGGCGAAGCCCGCAATAGCCAAGACATTGATGTAGATAAGCCCTTTAGTTGCGAACAGTGTGACGAAAGCTTCACACAGGAAGATCATCTTACATTACACGCCAAAATCCATGGAATAGATAGGTCCTCTGAATCCGAGGGTGAAATCCTTCTTTTGGTGCACAATGACCCAATCCACATAAAAGGTGAGGTGGCCCTTTGCGAATTGCGCGGTAAAAACTTCTCGCAATTAGGCTACCTGACTGTTGACGTCGGAGGACACAACATTGATACGTCCTTAGACTCTGACGGTGATCAGCAAATGCTTGCAGAGCAGGAAGTCGATCTTGTACAGCATGAAGGACTTCATGCAAAAAGGCAGCTTTTGCTTTGCGAATTATGTGGTAAAAGCTTCTCGCAGCTCAGCCACCTAACCCTTCACACCCAAGAACACAACACAATTAAGCCTTTAGAATCTGGTAGGAGTCAGCAAATCTTTGCAGATGAAATCGATGTAATGCAGAACGAAACAGTTTATTCAGAGGAGGTGGCTTTCAATTGCGAAATGCAAATAGATGGGCCTTTTGAGGCTGATTCTGACCAAAAAATCGTGACAGAGGAAATTGATCGTGAACTAGTTCATTCAGCTGGCAAGGATGCCAGTTGCGAACCGTGCAGTGACCAAATCCTTGACAGCGAGGCGTACAATTTAGACAAGTCGGTTGCTGCTGAGTTTATCCAGGAAAAGCATGCGGAAGAAAATGGTCTTCTTGGAAATGAAGCAATTCTTATAGAGGAGGAGATTTTGAGTTGTGAACTGTGCGGAAAATGTTTCGAAAATAGAGGTGCTTTAGAACAGCACTCTAGGGCACATATACAATTATGTCAAGGAGAGGAACCGTACGTATGTGGTTTCTGTGGGGAAACATTCGCTTTTAAATCCAATGCGGAAAAACATTCGTTGATCCACAACAGCGACAAGCCCcaattaattaatgaataa
- Protein Sequence
- MQETITFLFYTYKYLTILCFRDQHEVEFKSVLPDIKQEDEYWLCVCNDCHEFFDSNELLETHKLAPHFDRNCPSNEGAAACSIDIEDKTALADENKPVIGNHRSKPFSCIVCGKGFAWNYLLNIHIRRHTGEKPFVCRYCNREFAHKNSYRAHEHAHRVKKDFACEQCDMSFLRQHTGENPFKCEQCHQEFSEQSHLEEHAKTSTSSLDRLDTYQEEKLTITATRLQYTSVEPSSPVHHSSSDQEDDGTSYWLFFCNKCHTFFDSKEHLASHKTEIHFEGTSTLENRANDCDNTDSECQPSTVASSANTLKGSDFQNIRYRSKQQRIRLAQRRDLQKHARHHAGLKYRKRFRGKGYLIKQKLKHLRQKLFICKVCGKRFAQRNHLGLHSRSHHARRPFNSGCDHKIHSRKSDLEDNETESVKPDSSQEKFTGINDVIQNQTVETQDKSFICELCGRGFTRKNYLGFHSKVHKKDASFKSSNSQEILTEETNIALHEKTNTSIGKPFICEVCGRSFTLKRFLANHTRVHKREESSSSDYSQQLCTEKSDLEKRATFHRDERQFLEHVSVHKSDTSFESEYSQQTSTEENGNIGEKPFTCGVCGRNFKREHYLALHATVHEKDKLSKSGHSQEVLTEANYLEQLDVIPKVFNCEECGRNFKRKYCLAAHSTVHKRDKTREAGYSQQILHKTVDIVKKPFSCEVCGRSFALKRFLGTHAKIHKKDKLVEITHSQQMLSEETHVESDIQQGAAFHTAERQFLENVSVHKSDRSFESEYSQETPTEENGNMTEKPFTCGVCGRNFKREHYLALHATVHEKDKLSEPGHSQEVLTEANYLEQLEIIPKVFNCEQCGRSFKRKYCLAVHTMVHKRDKTRKSGYSQQILHKTVNIAEKPFSCEVCGRSFALKRFLGTHAKVHKKDKLAEIAHSQQMLSEETDVESDLQQGATFHTEKPHFLEDVRVRKSDRSFESYYSQQTPTEENVNMTEKPFTCGECGRNFKREHYLARHATVHEKDKSFESGHSQEEQPEAIPKVFNCELCGRNFKRKYCLAVHSMVHKRVQTGHKPFSCEVCGKRFKLKYHLTLHAIIHSRDNSQDSAYRQEIFTENSNRVLYETVPTGDKPFSCEVCDRRFKLKYHLALHFRVHRKDKSDKSEYSQGIIAEESNHMLYETVRTGEKPFGCEVCGRSFAYKRHLTKHVKAHEQDKVVETDYFQQMLTEEPSLVQHKSIYTREKPVCCEICGRSFTRKCHLANHIKAHMREKCFVADFSQEETDTKENVLADSAKRRFSCELCGENFPEKSHLDNHTRVHRRDNSFGTNYSQESGLAQPEPIPTMEKPFTCELCDRSFKRKYDLALHAIVHRRDTSFEPVPCSRRLLTEDSVIVQHETISLGEDPFNCEFCGRTFPQKCHLVSHSKVHTGNVKTKKKSTAKKSLVSKFCGKRFKQKHHLARHTSEHENEKSFESEATDTSDTLFSCALCGESFPKRAYLVNHAKVHIEDKLFEFEGSQQTIKEEIDLMQHDAICPGEQSSSRESLPEKDGEARNSQDIDVDKPFSCEQCDESFTQEDHLTLHAKIHGIDRSSESEGEILLLVHNDPIHIKGEVALCELRGKNFSQLGYLTVDVGGHNIDTSLDSDGDQQMLAEQEVDLVQHEGLHAKRQLLLCELCGKSFSQLSHLTLHTQEHNTIKPLESGRSQQIFADEIDVMQNETVYSEEVAFNCEMQIDGPFEADSDQKIVTEEIDRELVHSAGKDASCEPCSDQILDSEAYNLDKSVAAEFIQEKHAEENGLLGNEAILIEEEILSCELCGKCFENRGALEQHSRAHIQLCQGEEPYVCGFCGETFAFKSNAEKHSLIHNSDKPQLINE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -