Pjap014425.1
Basic Information
- Insect
- Popillia japonica
- Gene Symbol
- -
- Assembly
- GCA_004785975.1
- Location
- ML219548.1:7358-9331[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.7e-08 4.7e-06 27.0 0.1 5 38 19 52 16 57 0.92
Sequence Information
- Coding Sequence
- ATGGTTCGCCATAGAAAGAGAAAAACGAATATTGGGCTAACAGAAGAGCATGTAATGTTTGAAGCTGTTAAATCCGTTCTTAATGGAGGTTTATCCATAAAAGCATCTGCTGCGCGATATTCGATTGCTAGAACAACACTAACTCGTTATGTTAAAAAATGCAAGGATCTCCAAATTGACTGGGATTCTGCTTCTGTGGAAGATGTTCCTCGATTAAGTCCACGGTATGATAATAGAAAGATCTTTTCAGACCAACAAGAAGTGATTTTGTGTGATTACCTCCAAACTTGTGCAAAACTCCATCATGGTATGCCCCCAAAAGCAGCACGGGCTTTGGCCTATGACTTAGCTACAGCTAATAATATACCAGTCCCAGATTCCTGGTCGAAAAACAGAATGGCTGGAGAATACTGGCTGACTGCATTTCTAACGAGGAACAAAAACATATCTATACGAACTGCCGAGTCAACAGCTTGGTTGCTACATCACCCCGGTAAACGAATTACGATATACGATATTCCCGAAATACTTGGACAGGCTTATCCACTGGCTTTTTCCTCGAACAACATTATATCAGCCTTTCGGAAAACTGGACTATATCCATTTAACAGACACATTTTTGACGACAGTGAATTTTTAGCTGCATCTGTAACGGATATGACTCCTAGTGAAGCAACCGAAAGGGCTTTGGGATCGAAAAGCACCAGCTTGGATACACCTAGTACAAGTTGTTCGGAAACACCTGCTAACAGCCACTACATGAATGAGAGAGAGACAACACCTCCTTCTCAGTTTATACCTCCACATGTTATACAACCTTATCCTAAAGCTCAGAAAAATGACAGCGGACTAAAGGGGAGAAAAAAACGGAAATCTCAGATATTGACAGACACACCAATAAGTGATGAAATAgccgaaaatgaaaatttaaaaataacaaacaaagcaAAGATAacggttaaaaaaaatatttcaatcacAGATAAAAAAACTGACCCAAGTTCGTCAAGTGATTCTGAAACAATATCTGaactttcaaaaacaaacaGTGATGACAGTAACGACAGTGAAAGCGAAGAGGCAAATCCCTGTGAAGACCTAAAAGTCGATgcatttgtgttagttaaattTGCCACAAAAAAGACAATAACATATTATGTCGGACAGATAAAGGAAATTCTTCAAGATGAatgtatcattaattttttaagaaaaaaaaatgaaaaatttttattccCGGCTGTAGAAGATGTTGCGAGTGTTTCTCGCGATGATCTTGAGCTTGTATTGCCCCAGCCTGTGAAAACTGGGGGAACTGCAAGAACAAGCAGTTCTTTCAGATTTATGATTAATTTGGACGCATACAATGTAtgctaa
- Protein Sequence
- MVRHRKRKTNIGLTEEHVMFEAVKSVLNGGLSIKASAARYSIARTTLTRYVKKCKDLQIDWDSASVEDVPRLSPRYDNRKIFSDQQEVILCDYLQTCAKLHHGMPPKAARALAYDLATANNIPVPDSWSKNRMAGEYWLTAFLTRNKNISIRTAESTAWLLHHPGKRITIYDIPEILGQAYPLAFSSNNIISAFRKTGLYPFNRHIFDDSEFLAASVTDMTPSEATERALGSKSTSLDTPSTSCSETPANSHYMNERETTPPSQFIPPHVIQPYPKAQKNDSGLKGRKKRKSQILTDTPISDEIAENENLKITNKAKITVKKNISITDKKTDPSSSSDSETISELSKTNSDDSNDSESEEANPCEDLKVDAFVLVKFATKKTITYYVGQIKEILQDECIINFLRKKNEKFLFPAVEDVASVSRDDLELVLPQPVKTGGTARTSSSFRFMINLDAYNVC
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01252713; iTF_01252715; iTF_01252716; iTF_01252717; iTF_01252701;
- 90% Identity
- iTF_01252713;
- 80% Identity
- -