Pjap007781.1
Basic Information
- Insect
- Popillia japonica
- Gene Symbol
- Mblk-1
- Assembly
- GCA_004785975.1
- Location
- SMLS01047557.1:16737-19149[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.7e-17 1.1e-14 54.6 0.0 1 45 11 56 11 56 0.95 2 2 1.2e-17 2e-15 57.0 0.0 1 43 379 422 379 424 0.95
Sequence Information
- Coding Sequence
- ATGCCAACGGTAGCAGGTAGACGTACGTACACGGAAGACGAGCTACAAGCCGCCCTCAGGGATATACAGTCGGGAAAACTAGGTACCCGCCGAGCCGCCGTTATATACGGCATACCCAGATCGACGTTACGGAATAAAGTCTACAAATTAGCTCTGGAGAAAGAAAGGGAATCGCACCTAAACCCACTTGGACCTCTCAAAATCGAAGAGGACGAAGCTATGGACGACGATAAGGAGTTGTCTGGCGCTGAAGAAGAAAAGGAAGTAGAGAAAGCGCTCAGAGCGCCTCTGCTTTCCATAGACGACATCGTCCGGTTATCCAACATCGAAAATCCAGACGCCTTACGAAGCCTACTTAAAGGCAAGGAAGAAATGTGGTCTGGAATGGAACACAGCGCTGTTGGCCCTTATATACAAAATCTCCTCATGAAAACGACGACGATATGTCCGAAACCGCCGTTGGAGAATGAAGTAACACCAATCTTACGAGAAGTCCTGCGGAAGGTGGTAACGGAAGAAAAACTCCGATTACATACAAACAACGGTGATAACGAGCGGATAATGCGTCCTAGTCCATCAAATTCGGTCACGTTAAAGAGCGACAAGTGCAAATCCGAATCGGACATGGAAACCGATGAGACGCCAGTGAATGTGATACTAAAAATTCCGTCCTACAGGCCGACCGTGAGTAAAAACGGCGATCTACAATACCGGAGTCCGCTACTGGAATCGTGTACCACCGGCGGTAGCCTCGTATCGCCGCCCGTCTCCGCTAGTGAATCGGGATCACCACCGATACTACCACAAGCACCACCCGCGACAGCCAAGATGACCATGAAGGACGTCAAAGACGTTATCGCAAAGAATATCAGTCACAAGTTTCACCTTAGTCCCGATCCGATGCATACGACGGCTACACGTCATCCTATCATTGAACTGGACACGAAACGGTTGGATTTCACGCCGCCTCTAGGTGGCATTCCAGTCATAAAATCAACGCCGCCGGATTTACCGCGAACACCGTACCAGCCACAACCGCACACGAAACCTCCTACTAATACTACGAACAGCGCTACAACTGCGGCAACGGGCGGTAAGGGTACCAGACCTAAACGGGGGAAGTACCGAAATTACGATCGGGATAGTCTCGTTGAAGCTGTTCGAGCAGTACAACGAGGTGAGATGTCCGTTCACAGAGCCGGTAGTTACTATGGTGTACCTCATTCTACATTAGAATACAAGGTCAAAGAGCGTCATTTGATGAGACCTCGAAAACGCGACCCGAAACCAAATCCAGTCGACGAAAAGATCGCATCACTTAAACAGAACGACCTGAAAAACGCAGCAGAACGAATGAAGCCGACCATAAAACCTTTACAGAAATTCCCACCAACGTCGCCAAACGGCATGAAGATGCCTATATTTGACCCTAACCTTCCCATGCAATATCCACCGCCGTTCCCTTTTTGGCCACCTAGTTTCTCACAATTCCCTATGGACTATACGAGAACCACTACGGCCTTTCCCACGAACCCTGAACAGTACTACGCATCCCATATGATCCAGAAACTACAAGAAGAATCCAGAACGCATTCCAACTCAACTACCCCTTCGACGACACCCAACTCCACACCTACCTTGGCCAAAAATGCTCGGCAAATCGCTGAATCTTTACTGGATCCGGGAGCAAACAGTTCTTTCTTAGACGGAATCATCAGATCGAGTTTAGAATCTGGTGTCCCACCCACAGAAGATAAATCACCCAAAGAAGAAAAGAACGTAGCACctgaaaatatgtcaaataaagCACTTTTAGATCAATTATGTCGAAACAGCCGTTTAACGCCGTTAACTAAAATAACCGATCCGAGCAGTAGCGGGGACGAGAGCTATCGGAAAGGATCTAGTCCGTTAGTCTTCGCTAATAACACGAAAGATGACCAGAACCATTCGCCTAGGACACAGGAGAACTCCGAAATTCACACGATAGAGTCCTCAAATGATTCAAACGAAGCTTCGGATCGTAAATCAACGAACGATGAGGAGGTGAAGGTGGCACCACCACCCGGCAGAATATACGTAAAAACAGAGTTGACGAATCCCGATAATCTCAAACCGGAAATGCTGGTAAGGTTTCGGGATGTATTGCACGACGTAGATAGGAATGGTATCGGTGGGGAGTCTATGCTAGGTAGTGCATCCGACACTGATATCTGTCAAGACTGA
- Protein Sequence
- MPTVAGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALEKERESHLNPLGPLKIEEDEAMDDDKELSGAEEEKEVEKALRAPLLSIDDIVRLSNIENPDALRSLLKGKEEMWSGMEHSAVGPYIQNLLMKTTTICPKPPLENEVTPILREVLRKVVTEEKLRLHTNNGDNERIMRPSPSNSVTLKSDKCKSESDMETDETPVNVILKIPSYRPTVSKNGDLQYRSPLLESCTTGGSLVSPPVSASESGSPPILPQAPPATAKMTMKDVKDVIAKNISHKFHLSPDPMHTTATRHPIIELDTKRLDFTPPLGGIPVIKSTPPDLPRTPYQPQPHTKPPTNTTNSATTAATGGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKRDPKPNPVDEKIASLKQNDLKNAAERMKPTIKPLQKFPPTSPNGMKMPIFDPNLPMQYPPPFPFWPPSFSQFPMDYTRTTTAFPTNPEQYYASHMIQKLQEESRTHSNSTTPSTTPNSTPTLAKNARQIAESLLDPGANSSFLDGIIRSSLESGVPPTEDKSPKEEKNVAPENMSNKALLDQLCRNSRLTPLTKITDPSSSGDESYRKGSSPLVFANNTKDDQNHSPRTQENSEIHTIESSNDSNEASDRKSTNDEEVKVAPPPGRIYVKTELTNPDNLKPEMLVRFRDVLHDVDRNGIGGESMLGSASDTDICQD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01498798;
- 90% Identity
- -
- 80% Identity
- -