Pjap004583.1
Basic Information
- Insect
- Popillia japonica
- Gene Symbol
- ARID5B
- Assembly
- GCA_004785975.1
- Location
- SMLS01055593.1:5418-8970[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.9 9.8e+03 -2.2 0.0 37 49 50 62 45 81 0.81 2 2 7.2e-27 3.8e-23 82.5 0.0 2 89 161 246 160 246 0.95
Sequence Information
- Coding Sequence
- ATGTACACGCGTAAacttattgaaaatttactttcAGAGATCTGTAATGACAGCGGAACATCAGTAATTATTCTCAGTTACCCAAAATACTGTCGATATCGATCAGTAATGAAGAGGTTGGAAGGAgtcgaaaatcaatttttgcgTCATAAACTGGTGAACGCTTTAGGAGGATTTAGTGTCCCCACGTGCAATACGAGAATACTATTTTGTAGAGACACTTTTGATTATCCAGAATTAGAAGGACATGAACTTTTGTGTAATCACCTCGCTCCGAAACTCAAAGGAAGGCCCAGAGGAAGACGGAAAAAACGTAGCACATCTCCAGGGTCGGAGAGTAATGAGTCAGAGTGTTCGATTTCTATTGTAGCTAGTACGTCAACGGGTAAACTGTCAAATGAAGATTGTATAAATGGATTTAGAAAAGATTACAGCACAATATCCACGAGACGAAGTACACGTTCTTCGGACGGCACCGACAGTAAAATGTTTCTTAAAAAACTGAGTTCGTTTATGAAAAGTAATCATACGCCAATAGGAAGAATACCTTTGCTGGGCTACAAAGAAcTTGATCTGCATGCATTCTACACAAAAGTTCAAAAATGTGGTGGCTACGATATGGTAACTGCAAATCGTCTCTGGAAATCAATTTTTGATGATCTAGGCGGTAATCATGGTAGTACAAGCGCTGCAACTGTAATAAGAAGACACTACGAAagATTTCTACTACCTTATGAACGTTACGTAAAAGGGGAGGAATACAAACCATTACCAGTGTCTGAAAGGAGAAGACTCAAGAGTAAGGCTAGCAGAAATAGTGTAAGCGATGCCGAAACTAGTGAAGGTACTTCCGGCAGTGATACTAGCACGTCAATGCCGCAACCTATATTTCCTTCTACTAGTCAAGCTTCATTTATAACATATGGAACAACGGAGAATAAG
- Protein Sequence
- MYTRKLIENLLSEICNDSGTSVIILSYPKYCRYRSVMKRLEGVENQFLRHKLVNALGGFSVPTCNTRILFCRDTFDYPELEGHELLCNHLAPKLKGRPRGRRKKRSTSPGSESNESECSISIVASTSTGKLSNEDCINGFRKDYSTISTRRSTRSSDGTDSKMFLKKLSSFMKSNHTPIGRIPLLGYKELDLHAFYTKVQKCGGYDMVTANRLWKSIFDDLGGNHGSTSAATVIRRHYERFLLPYERYVKGEEYKPLPVSERRRLKSKASRNSVSDAETSEGTSGSDTSTSMPQPIFPSTSQASFITYGTTENK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -