Prid021132.2
Basic Information
- Insect
- Polyploca ridens
- Gene Symbol
- retn
- Assembly
- GCA_951394255.1
- Location
- OX596261.1:9671735-9680443[+]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-20 2.5e-16 60.7 0.0 16 89 14 85 10 85 0.95 2 2 4.9 1.8e+04 -3.0 0.0 33 38 226 231 205 259 0.61
Sequence Information
- Coding Sequence
- ATGGCCACAGATCGTCCCCGTCACATTGGTTCACACATCAAAGGAACCCCAATAAACCGGCTGCCAATAATGGCTAAGTCCGTGTTGGACTTATACGAGCTGTACAACTTGGTGATCGCGCGAGGTGGCCTGGTCGAGGTGATCAACAAGAAGTTGTGGCAGGAGATCATTAAGGGACTCCGGCTGCCGTCGTCCATCACGTCTGCTGCCTTCACACTACGCACACAATACATGAAGTACCTATACGACTACGAGTGTGAAAAGAAGAACTTGTCTACTCGGAGTGAGTTGGACGCCGCCATCGAAGGCAACAAGCGGGAAGGAAGGCGAGCCTCCGGACAGTATGATGCGCAAGCGGCCCTCGCTATGCCGCCGCTGAACCGAGGAGTACCGGCTTCGTTGGCGCAGTTGTCACAGCACATGCAGCCACTGTCGCTATCCCTCGGCGGAGGAGTGGGTGGCGTGCCTCGCCTGCCGCCGCTACCTCCTCACGCACCTCATATCTCGCCTCACGATCTGGAGTACCGCGTCCGGGAGTACATGAAGATGATCCAGCAGCAGCGGGAGTTGATGAGGAATGGATCAGAATCTCCTCCGAACTCGAATGGCCCAGCTCCGATGATGTCGCCGCGCGACGCGGCCGCGCTCAGCGCCATCGACGTGTCGCGCCTCACGCTCTGGTCGCtctacaacaacaacaacaacagccCGCAGCCAGACCTTGAGCCGCAACGGAGCCTTGTAAACATAAACAATTATACATTGTACAATACTGAACACCCAGATGGAACAGCACACGGAGGAACAGCTGTCATAATCAGGTCATCCATCAAACATCACGCTCTAGCTCAGTATCGGACGGAACACATCCAAGCGACAACTATCGCAGTAGAAGGAAAAACGGGCAACTTCAACGTCTCTGCAGTCTACTGCCCACCGAAACACAAAATCAAAGAAGTACAACTGACACACTACTTCAGCTCTCTTGGCGCTAGATTTATTTCTGGAGGAGACTGGAATGCCAAACATCCCCACTGGGGTTCACGACTAGCTACCACACGAGGAAGACAACTCAAACTCTCAATCGAAAATAACAGTCTCACAACATTATCCACGTCTGAGCCAACACACTGGCCGACTGATAAAAATAAACTACCTGACGTAATAGACTTCTTCATCTGCAAAGGAATGTCACAATATTTCACCTCAACCAGCTCATGTCTAGACGGATCCTCAAACCACACACCTGTACTGCTAACAATCAGCACAATTCTATTAGAATACAAACCTATCCCTAAACTATACAACAAGGATACGGACTGGGAATCGTTCGGTGACATTATTAACAAAAGAGTTAATCTGCAAATACCACTGAAAACCACAGAAGACATTGAGACAGCGGCAACTCAGTTTACAAACCTAATCCAAGTCGCTTGCTGGTCGACCACTCCTGATAAACCAGCCAACAACCCTAGACACTCTATTCCATGggaattaagaaaaaaaaattctagaAAAAAGAAGACTGCGCAGAGTGTGGCACTGCAGTAG
- Protein Sequence
- MATDRPRHIGSHIKGTPINRLPIMAKSVLDLYELYNLVIARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTQYMKYLYDYECEKKNLSTRSELDAAIEGNKREGRRASGQYDAQAALAMPPLNRGVPASLAQLSQHMQPLSLSLGGGVGGVPRLPPLPPHAPHISPHDLEYRVREYMKMIQQQRELMRNGSESPPNSNGPAPMMSPRDAAALSAIDVSRLTLWSLYNNNNNSPQPDLEPQRSLVNINNYTLYNTEHPDGTAHGGTAVIIRSSIKHHALAQYRTEHIQATTIAVEGKTGNFNVSAVYCPPKHKIKEVQLTHYFSSLGARFISGGDWNAKHPHWGSRLATTRGRQLKLSIENNSLTTLSTSEPTHWPTDKNKLPDVIDFFICKGMSQYFTSTSSCLDGSSNHTPVLLTISTILLEYKPIPKLYNKDTDWESFGDIINKRVNLQIPLKTTEDIETAATQFTNLIQVACWSTTPDKPANNPRHSIPWELRKKNSRKKKTAQSVALQ
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -