Prid004184.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polyploca ridens
Gene Symbol
JARID2
Assembly
GCA_951394255.1
Location
OX596244.1:16266377-16285655[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 1.3e-20 4.8e-17 63.0 0.0 6 89 593 673 590 673 0.93

Sequence Information

Coding Sequence
ATGCATCAGTATATAATGACACGTTCTAGATCGAAATCATTGCCACGAGCTACCACGTCGCCATTAAGCGTGATATCTAGTTCAGACACGTCGATTGCGAAGtccaaaaaaaaacacttttcacTTAATGCGAGGAATAATGCCAAAGATAAGATAATAAAATGTGTTCAACCTCGAATTCTGGCAAGTAGTTGCCCACAGGTCACAGCTTCTGGTGGAATCGTTCTTAGTGATAGTAAAACTCACAATACAGTTACTCCGCCTCCTTCGAAAAGTAAAGCCAGAGAGTTACGTGATATTCCACCACAAATTCTGCCAGTAGATGACAGTAATATCCACGAGCAAAGTAGCTGCCCGCAGGTCGATGCTCCTAATGAAATTGTATTTAATGGCAGTAAAATCGACTCTAAAAGTACAGCCGGAGTGATGCGTCTAGAAATTGGGCCAGTAGACCAAAGTGACTTGGAGATCGTTTCTGGTGGTGAAATTGCTTTAAAAAATAAGACTGACACATCCGCACTACGATCCTCACCCTTAAGTACAAATACTGCAAATGATTCTGTACAAGATCAGGAGATGAGTGAGGACCCAATCGTACTTACTACCGGGGTTTTCCTCGAAGATGTTGTGCAGACAGAGGAGTCAGATATTCTACGCCCACAAAAGACAGCAGAACTTCTTGAACGAACTGCTAATCGAGAACTTGCTGTAGAAAATATAGTGCCGGCGGCGGAAACAACTGAAGATAATTGTGTACCTCAATTCTATGGAAATGCTGGTATTGAGACATGGATTAATGATACCTCTAAAGTGCAGACGGTTACTGGCATACAAACAGAGTTAAGCCCTATAGAAGATACACAACCGCCACCAACAGTAGAAACTTTTACTAATACAGCTACAACTAACTGTCCCGTTAAGCGGTTAGGTACGCTTAAAAAGCTTTGCAGTGCAATCAATGAAACGATTGATTATTGTATTGACTGCTGTCAATGCAAAATCCTCAAAAGTTTATACACTGTAATCCAAAGGGTACGCTCAGCAAGTAATAGGTCAAAAGATGATATTTATGATTTCGATTCACTTAGGGATGACATCGCAGAAGATCCGCAGATGAGTCTCAGAGAACGCCGACGACAACGCATGTCTCGCTCGCAAGAACATGCAGCAACCGACAATGGAGTTGGAATCGGGATGCCCGTGTACTTAGACATCCTACCATATAACAGCCCAAGTATAGCAAAAATAACACCGGTGTATAATCCTTATGAAGTTGACGTTGCTTTTAAAGCAATACTCATAGATAAGGCGCAAGCTAAAAATGAGAAATTATATGACATCGATGCATTATTAGAGGATGTGATCCAAACATTGATGATGAACCCATTCTCACAGGTGAAAGATCAAAATTCACCAACCGATGATTTTTTTCTGAATTATAACACCGATTCTAATGAAGAATCATCCGAAAAAAGCGAACATTATAGCAGCGAGGCAGTGAAACCATCGAAACCTACAAAACGGGGATTTCCAAAGAGTGTAGATAATGCAATGCTCGTAGACGCGCCAATATTTCATCCAACGCAAGAAGAATTTTTGGACCCCATTGCATATTTTGAGAGAATCATGCCGGATGCAGCAAAATTTGGATTATGCAAAGTAGTGGCACCTGTAGGGTTCAGTCCTACATGTAATTTGAATGAAAACTTCAAATTCAGCGTGTCCAACCAGTACATAGCTCGACTTTATAACCGCTGGAGTCCATTAACACGGGAAATGTGCGCCATTAAGGCGTACTCAGCCTCCCAAAATGTACCATTCAATAAAGCACCTCTGGTGGAAGGTTTGGAAATTAACCTTCCAAAACTATATCACTTAGTTCAGCGACTTGGGGGGTTGCAAAATGTAATTCGAAAAAAGCGATGGGGACGGGTCGCTGAGGAGATGCGATTCACAAAGGGCCCTAATCCTGGCCACAAGCTTGACGTCATCTACGTAAAATATCTACTTCCATATGATACTCTGTCCCATCAGGAACGGCAAAAAATTATGTGCCAGGTGGAAAAGTCCTGGcagaaaaaaaaccaaaaaatgCTGGAAAGAGCATTAAACCCTCTACTAAGACAGAAGCGTTTGCTCGGCGAGACGGATGAGACTGAGTCCTCAGACGACGACACCGAAGATGAGTACGCATCTTTGGCTGACGCCGAGGACTGCGTCGTCGCCGGCAGACCAATGAACTTAAATAATTTCAAAAAGGTGGCATCAAACGCTAGGGACACTTATTTTCCAAGGTCAGAGCATCCAACCGCTGCTCAGGTTGAAGAGGAATATTGGCGCGTGGTATTATTGAACACAGACCACGTGTGCGTCAATTCCGCCTCTATTGACACAGGTGTTGAAGGGTACGGCTTTAGCAACAAAGTTGATGATCCATACTCTGAACATCCGTGGAATTTAAAgGTTATAAGTAACAATAGTCGTAACGTGCTGCGTTCGCTGGGCCCAGTGCTGGGCGTGACTGTGCCAACTTTGCACCTCGGCATGGTGTTCTCAACGAGCTGCTGGCACCGTGACCCCCATGGCCTGCCGTGGCTAGAGTACCTGCATAATGGCCCGGGAAAAATATGGTACGGAATACCGGACGAGCAGAGCAATAATTTTAGAAATGCTGTGGAGAAGTTGTGTCCCACGTCATGTCAGAATAAGTCAATATGGCTGCCATCGGACATTACCATGATTCCGCCCAGTCTCCTGCTTGAAAGCAACGTGTCTCTGTCACGGGTCGAACAACGTCCCGGGGAATTCATAATCGTTTTCCCCAAGGCATACTCGAGTTCTTTGTCCACGGGGTTCACAGTATCTGAAAGCGTATACTTCGCTACTAAGACCTGGCTAAACACAATCCACCAAGTATTCCAGGAGGTACGCGATAGTTGCGAGCCGACAATGTTTGCGGTGGAGCAACTGTTGATCGCCGCGACGCGCGACCCTCGCGCTCAACTCAGCGTGCTACAGCAGGTGCACTCCAACCTGAGACCGCTTCTCGAACAAGAACTACAGTTCCGACGATCAGTCGAGTTCTACGATATAAAAGTAACAAAACTAACTGAGGCTCAGCGCAATCACAACACAAAAAAATCGACGGGTGCTTTTAATGTGCGGGATTTAGACGAGTGCCAAATATGTCGCACAACTCTTTACTTATCCAAGGTGACAGGTGTAACGGGGAAAAGGTCGACATTTTGCCTGCAGCACACGCTTTGTCTCCTTGAGAAAATGGAAACGGTGAACCCGAATAGTCTCGAGCTCATTGTTTATTATTCGAACCAGGAGTTGAAGCTAATTATTTATCAATTACAAAACCGTATCAGTCCCTTTAATACCAACATCTGTCGCTCACCGAGGGTGGACTCGCCTGGTCCCTCGCCGAGTCCACAACCCGGTCCCTCGACGAGTCCTCAACCCGGTCCCTCGACGAGTCCTCAACCCGGTCCCTCGACGAGTCCTCAACCCGGTCCCTCGACGAGTCCACAACCCGGTCCCTCGACCGCCCCGTAA
Protein Sequence
MHQYIMTRSRSKSLPRATTSPLSVISSSDTSIAKSKKKHFSLNARNNAKDKIIKCVQPRILASSCPQVTASGGIVLSDSKTHNTVTPPPSKSKARELRDIPPQILPVDDSNIHEQSSCPQVDAPNEIVFNGSKIDSKSTAGVMRLEIGPVDQSDLEIVSGGEIALKNKTDTSALRSSPLSTNTANDSVQDQEMSEDPIVLTTGVFLEDVVQTEESDILRPQKTAELLERTANRELAVENIVPAAETTEDNCVPQFYGNAGIETWINDTSKVQTVTGIQTELSPIEDTQPPPTVETFTNTATTNCPVKRLGTLKKLCSAINETIDYCIDCCQCKILKSLYTVIQRVRSASNRSKDDIYDFDSLRDDIAEDPQMSLRERRRQRMSRSQEHAATDNGVGIGMPVYLDILPYNSPSIAKITPVYNPYEVDVAFKAILIDKAQAKNEKLYDIDALLEDVIQTLMMNPFSQVKDQNSPTDDFFLNYNTDSNEESSEKSEHYSSEAVKPSKPTKRGFPKSVDNAMLVDAPIFHPTQEEFLDPIAYFERIMPDAAKFGLCKVVAPVGFSPTCNLNENFKFSVSNQYIARLYNRWSPLTREMCAIKAYSASQNVPFNKAPLVEGLEINLPKLYHLVQRLGGLQNVIRKKRWGRVAEEMRFTKGPNPGHKLDVIYVKYLLPYDTLSHQERQKIMCQVEKSWQKKNQKMLERALNPLLRQKRLLGETDETESSDDDTEDEYASLADAEDCVVAGRPMNLNNFKKVASNARDTYFPRSEHPTAAQVEEEYWRVVLLNTDHVCVNSASIDTGVEGYGFSNKVDDPYSEHPWNLKVISNNSRNVLRSLGPVLGVTVPTLHLGMVFSTSCWHRDPHGLPWLEYLHNGPGKIWYGIPDEQSNNFRNAVEKLCPTSCQNKSIWLPSDITMIPPSLLLESNVSLSRVEQRPGEFIIVFPKAYSSSLSTGFTVSESVYFATKTWLNTIHQVFQEVRDSCEPTMFAVEQLLIAATRDPRAQLSVLQQVHSNLRPLLEQELQFRRSVEFYDIKVTKLTEAQRNHNTKKSTGAFNVRDLDECQICRTTLYLSKVTGVTGKRSTFCLQHTLCLLEKMETVNPNSLELIVYYSNQELKLIIYQLQNRISPFNTNICRSPRVDSPGPSPSPQPGPSTSPQPGPSTSPQPGPSTSPQPGPSTSPQPGPSTAP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00006866;
90% Identity
-
80% Identity
-