Pser006348.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polyplax serrata
Gene Symbol
nfxl1
Assembly
GCA_037055365.1
Location
JAWJWE010000036.1:6885502-6889018[-]

Transcription Factor Domain

TF Family
zf-NF-X1
Domain
zf-NF-X1 domain
PFAM
PF01422
TF Group
Zinc-Coordinating Group
Description
This domain is presumed to be a zinc binding domain. The following pattern describes the zinc finger. C-X(1-6)-H-X-C-X3-C(H/C)-X(3-4)-(H/C)-X(1-10)-C Where X can be any amino acid, and numbers in brackets indicate the number of residues. Two position can be either his or cys. This family includes Swiss:P40798, Swiss:Q12986 and Swiss:P53971. The zinc fingers in Swiss:Q12986 bind to DNA [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 20 1.6 6.6e+03 -3.3 1.1 15 19 161 165 160 165 0.81
2 20 0.22 9e+02 -0.5 0.8 4 10 196 202 195 202 0.95
3 20 1.3e-07 0.00051 19.5 16.7 1 19 210 227 210 227 0.99
4 20 2.2e-08 8.7e-05 21.9 13.3 3 18 265 280 263 281 0.91
5 20 1 4.2e+03 -2.7 1.9 6 10 306 310 305 310 0.90
6 20 2.9e-08 0.00011 21.5 11.3 1 19 316 334 316 334 0.99
7 20 1.6e-06 0.0064 15.9 11.0 1 18 369 386 369 387 0.97
8 20 0.58 2.3e+03 -1.8 0.4 1 5 396 400 396 405 0.82
9 20 0.097 3.9e+02 0.7 13.3 3 18 423 438 421 439 0.92
10 20 2.1e-09 8.6e-06 25.1 13.2 1 19 448 466 448 466 0.99
11 20 0.89 3.6e+03 -2.4 1.0 5 10 494 499 494 499 0.94
12 20 0.0021 8.5 6.0 5.0 10 19 515 524 513 524 0.94
13 20 0.003 12 5.5 6.6 1 12 534 544 527 544 0.86
14 20 3 1.2e+04 -5.9 4.5 14 18 573 577 570 578 0.81
15 20 2.5 9.9e+03 -3.8 0.6 9 12 595 598 595 598 0.77
16 20 2.4 9.8e+03 -3.8 1.0 6 10 604 608 602 608 0.56
17 20 4.6e-07 0.0018 17.7 5.8 1 11 614 624 614 626 0.96
18 20 9.5e-06 0.038 13.5 19.4 3 18 655 670 654 671 0.91
19 20 0.79 3.2e+03 -2.3 2.5 9 15 677 683 675 684 0.87
20 20 4.3e-07 0.0017 17.8 14.2 1 18 716 735 716 736 0.90

Sequence Information

Coding Sequence
atgaataaaaaatctgATAAGGGAGGAGGTGGAAATCCGTGGAAGAAAGAgcagaacaaaataatacaatcgAATAATAAGTCggctgaagaaaaatttcgcAGAGAACAGGAGAAACTCCAAGCGGCCGTTCAAAAACATCTGGAAGAGCAAGATTATGAATCATCTTCCGATGAAGAGGCCTTAGAATCAGAGTCAATTCTTAAttcagtttttcaaaattatggtCAGTTTGTTAGCAATGCTTCAGGCATTGAAAAAACTCAGCAGTTCTTGGAGAATACTTTTCAGTCAGGAGCCGCGATATGCTTAATTTGTATTGGCAGTGTAAAGCGATCAGATCCTGTATGGAATTGCTTAGAATGCTATGGCTATTTCCATCTAGTCTGCATTCAGATGTGGGCTAGGGACAGTCTGCAGCAGCAAAAATTAACCCAAGATGAATTACCTGCATTtaggaaaaccaaaatttcctGGGCCTGtCCAAAATGTCGTCATGATTACGAACAAACTGATGTtccacaaaaatatttctgcttTTGTCAGAAAGTTGAAGACCCTCCATATCATCCTTGGCTCATTCCACATTCTTGTGGTGAAACatgcaacaaaaaattacaaccagAATGTGGACATTCTTGTTTATTACTCTGCCACCCtgGACCATGTCCTCCCTGCCCAAAGACTGTTAAAACGTACTGCCactgtaaaaaaaagggacCAAATCAACAACGctgtagtaaaaaattatggtcATGTAACTCCAAATGTGAGAAGTCACTTCTCTGTAAGAAACACAAGTGTGAAAACATTTGCCATTCAGGTGATTGTCCACCATGCAATAAAGAAAGTATTCAAAAATGCAAGTGTGGACTTAAAGAAAGGAAGCAACCTTGTTTCAATCCTACTTGGCAATGTGAAAAGgtaTGTGGGAAACCCTTTTCATGTGGATTCCACAAATGTACACTGGTGTGCCACGAAGGTTCCTGCGGAGAGTGTCCGTCCTCCTTAGAGCGTAGTTGTCCTtgtggaaaaaacaaatttttactaccTTGTACAGTTGATGTTCCAGCTTGTAACGACACGTGTGATAAACTGCTGGACTGTGGAATTCATAGGTGCTCACAAAAATGTCATAAAGAGAAGTGTGGGATGtgcTTGGAAATAGAAGTTAAATTGTGTAGATGTGGACTACACAAAAAGAGTCTTCCTTGTCAAAAGAGTTTTCAATGTGAGACCAAATGCAAGAGAATGAAGAATTGCTTAAAGCATCCTTGCAACAGAAAGtgctGTGATCTCCTTTGTCCTCCATGTGAGAAACCTTGCGGTAAAACGCTTAAATGCGGTTACCACAAATGTCCATCAGTTTGCCACAGGGGACAATGCTACCCATGTCCTCAAGTTGCTCAGGTTAAATGCAGATGTGGTGGAACGACCATAACAGTTCCGTGTGGACGCCAGAAGAAAACTTCTCCACCCAAATGTAACAAACTTTGCACAATTGCACCGACATGTCATCATCCTTCTCGTGAGCCACACAATTGTCATTTCGGTGAATGTCGCCCCTGCAAGCAAATATGTGGGAAAGACAGAGAAAGGTGTTCACACAAGTGCCCAGCACCGTGTCACTCGTCTGTTTGGGTTAAAATCCAAGACAATCATCAACCGGCAGGACCTTGGGAAGTGACcaaaccaaaaatgaaacgCTGCAATCTTCCCTGTCCCGACTGCGAAGTACCCGTTCCTATCACTTGTTTGGGTGGACACGAAACCAGCGATTGGCCCTGCCATAAAGCCCAACCTTCCTCCTGTCACCGTCCGTGTGGGCGCCTTCTTAGATGTGGAAATCACACGTGTGAGAAGCCTTGTCATGTCGTCACGGGGGCTGGCGATGGAATTCAAgCCGGTGAAAACTGCATGGAATGCGATTCCGAATGTCTTCGAACTCGACCGGAAGGCTGTACACATCCCTGTTCAAAACCTTGTCATCCGGGCCCATGCCCACCCTGCAATTTAAACCTTAAAATGAAGTGCCACTGTGGAATTTGTGTTCTTTTTGTATATTGCGATCAGATGACGAACGGAGATGAGAAATTCAGGGAAACAGTTCTGAGCTGTGGAAATAAGTGCCCTAAAGACtacCCCTGCGGACACAAGTGTAAGTCAACCTGTCATCCGGGAGACTGTCCGGATCCAAATTCttgtaaaaagaaagttaaattgTCATGTAAATGCGGACGACTAAAGAAAGACCTTCCCTGTGACGTGGTCAgactagaaaagaaaactagaaTAGAGTGCGACGCGGTCTGTCTGTCAATcctagaagaagaaaagaagGTTAGGGAGCAGGAGatggagaaaaagagaatagAAGAAGAGCGGAAAAATAGAGAAGAAGTAGAGAAATTCGAAAGAAAACTGCAGCAGGGAAGAAGAAAGCAGAGGGAAAGGTACGAGCCAAAGGAGGAACCTTCTTTTCTGTCTCGCCGTTGGCCAGTTCTTTTGGGAGTTTTCGTAGCACTCGTAGCCGtcacttttttcatttggaaatga
Protein Sequence
MNKKSDKGGGGNPWKKEQNKIIQSNNKSAEEKFRREQEKLQAAVQKHLEEQDYESSSDEEALESESILNSVFQNYGQFVSNASGIEKTQQFLENTFQSGAAICLICIGSVKRSDPVWNCLECYGYFHLVCIQMWARDSLQQQKLTQDELPAFRKTKISWACPKCRHDYEQTDVPQKYFCFCQKVEDPPYHPWLIPHSCGETCNKKLQPECGHSCLLLCHPGPCPPCPKTVKTYCHCKKKGPNQQRCSKKLWSCNSKCEKSLLCKKHKCENICHSGDCPPCNKESIQKCKCGLKERKQPCFNPTWQCEKVCGKPFSCGFHKCTLVCHEGSCGECPSSLERSCPCGKNKFLLPCTVDVPACNDTCDKLLDCGIHRCSQKCHKEKCGMCLEIEVKLCRCGLHKKSLPCQKSFQCETKCKRMKNCLKHPCNRKCCDLLCPPCEKPCGKTLKCGYHKCPSVCHRGQCYPCPQVAQVKCRCGGTTITVPCGRQKKTSPPKCNKLCTIAPTCHHPSREPHNCHFGECRPCKQICGKDRERCSHKCPAPCHSSVWVKIQDNHQPAGPWEVTKPKMKRCNLPCPDCEVPVPITCLGGHETSDWPCHKAQPSSCHRPCGRLLRCGNHTCEKPCHVVTGAGDGIQAGENCMECDSECLRTRPEGCTHPCSKPCHPGPCPPCNLNLKMKCHCGICVLFVYCDQMTNGDEKFRETVLSCGNKCPKDYPCGHKCKSTCHPGDCPDPNSCKKKVKLSCKCGRLKKDLPCDVVRLEKKTRIECDAVCLSILEEEKKVREQEMEKKRIEEERKNREEVEKFERKLQQGRRKQRERYEPKEEPSFLSRRWPVLLGVFVALVAVTFFIWK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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