Basic Information

Insect: Polyplax serrata
Gene Symbol: -
Assembly: GCA_037055365.1
Location: JAWJWE010000037.1:4012801-4026283[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.27 16 5.7 1.3 1 22 505 526 505 529 0.90

2 15 2.7 1.6e+02 2.5 3.8 1 20 653 672 653 677 0.92

3 15 0.00024 0.014 15.3 3.9 1 23 733 755 733 756 0.95

4 15 0.00015 0.009 15.9 2.1 1 23 768 791 768 791 0.94

5 15 0.18 11 6.2 0.7 1 21 799 819 799 823 0.90

6 15 0.68 40 4.4 0.4 2 23 844 866 844 866 0.89

7 15 2 1.2e+02 2.9 0.2 3 21 873 891 872 892 0.88

8 15 0.011 0.63 10.1 0.5 1 23 910 932 910 932 0.97

9 15 0.00048 0.028 14.3 0.0 3 23 944 963 942 963 0.97

10 15 0.0028 0.16 11.9 1.6 1 23 969 992 969 992 0.98

11 15 1.7 96 3.2 0.1 3 23 1050 1072 1049 1072 0.90

12 15 0.0011 0.064 13.2 1.1 1 23 1078 1100 1078 1100 0.98

13 15 0.00039 0.023 14.6 4.9 1 23 1106 1128 1106 1128 0.98

14 15 0.004 0.24 11.4 2.1 1 20 1134 1153 1134 1155 0.95

15 15 0.4 23 5.1 1.5 1 23 1165 1188 1165 1188 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.27	16	5.7	1.3	1	22	505	526	505	529	0.90
2	15	2.7	1.6e+02	2.5	3.8	1	20	653	672	653	677	0.92
3	15	0.00024	0.014	15.3	3.9	1	23	733	755	733	756	0.95
4	15	0.00015	0.009	15.9	2.1	1	23	768	791	768	791	0.94
5	15	0.18	11	6.2	0.7	1	21	799	819	799	823	0.90
6	15	0.68	40	4.4	0.4	2	23	844	866	844	866	0.89
7	15	2	1.2e+02	2.9	0.2	3	21	873	891	872	892	0.88
8	15	0.011	0.63	10.1	0.5	1	23	910	932	910	932	0.97
9	15	0.00048	0.028	14.3	0.0	3	23	944	963	942	963	0.97
10	15	0.0028	0.16	11.9	1.6	1	23	969	992	969	992	0.98
11	15	1.7	96	3.2	0.1	3	23	1050	1072	1049	1072	0.90
12	15	0.0011	0.064	13.2	1.1	1	23	1078	1100	1078	1100	0.98
13	15	0.00039	0.023	14.6	4.9	1	23	1106	1128	1106	1128	0.98
14	15	0.004	0.24	11.4	2.1	1	20	1134	1153	1134	1155	0.95
15	15	0.4	23	5.1	1.5	1	23	1165	1188	1165	1188	0.94

Sequence Information

Coding Sequence: ATGGAGGACTCGCACTACTTCTTGAAATCTATCAATCTCGAGAGTTACATCGATCACGAGAAAAACTTTTGCGAGTCGCTCACGAGAGAGGAAATGGACAACCTGGACTATTCGTCCCTCGGCTactccaaaatgaaaatagaggAGACGGGTGAGAAAGCTCAGGAAATGGACATCCCGGGCAAAACTGATGGAATCAACGAGGAAGTCAGTCAGATCATGGGAAGCGTTCACGCCGAtgatttcttctcttctttggAACTACAAAGTAGTTCGAAGATGTCGTCGAGCGTCATTAACTTTCCCAGTTTTCCAAAAATGACGTGTGGTATCGTCACTAGAAGTCGATCTCACGTCGCGACGAGTCACGACGTCTCGCAGAAAATCATAGATAAACccggaaggaaggaaaaggtGAAGCGACAGGGAAAGACCGTGAGAAATCGAGTCAGAAAAAAGGTAAGCAAATGTAAAAGGGACCCGGACAAAGGGAAGAAGAGCAAAGTCAGAGGTAGGAACTCACAGGTTGGAAAGCGAAGTTCCCTCGACGTGAAGTCTGCAGCAGGCTCTGACGGCCGCAAAAATTCCCAATCCTCGGTAAAAACCGAAGACGGTGTAACAGTCAGAGGTGTACCTGGggataaaaacaaagaagatgACTGGGTGTTCTTTCAACACTTGGGAATGAGGAGGGACGTGTCGATGGAGGACAAGCTGTTGGGTCACGAACTGAATGCAACAGGTCGACGATCCACCCCCGAGCTTTTTTCAATAAGCCCAATTTTAATGACTGACGACATGTCCGAGGAGAAGGACAAGGTGGACAAGTTACTGTCCGTTGACGACTACGACGAGACATTCCTCGAAGAGATGGAAGAGTTCAGCAACGCACCGCCGAGATCGCACACAGGTGGGAAGTGGAAACCCGGTAGCCTTCCAGTCAGATCGTCGCCCATCCTGTGGCAAAGTCAAAACTGGGAGAGTTTCCTCGACGACAGAAATACCAATTACGAAGCAAGTGGGAAAATCACATCGGAAACGTCGGTGGAGCCTCCTGTCGAAAGCCACGAGGGCAAAGGTCAGTCCCTGGTGTCCACGGGTGGGAAATGGAAATCATTTGCTCCACCGGCAAGTCACACGGGTGGAAAGTGGAAACCCATGACACCACCTGCCACCTACACAGGTGGGAAGTGGAAACCCTCTGAAGTCCCTCAAAGGACGAAGGTGGTGGACAATACCGAGCCCTCGTGGAAGTCGcagagcagcagcagcagcagtggGCCTCCGATCAGTCACACGGGCGGCAAATGGAAGCCAAACTCGGCCGATCACTGCAGAGAAGATCTCACTTCAGGGAAAGTTAAATCAAACGTCCCATCTCCTAGTCATACTCACGGCAAATGGGTCTCAGGTCCCGTCAAGGGGTCTTCTGGCAGAACTCCCTTAGATATTGTCGCCAACAGTCAAAGAACTTCAGGAAAATGTCTAAAAACATCGGGCGGTATGATTCAGTACTATTGTTCCCCCTGTAACCGTCGACTGTCTTCTAAGAAAATGTACAGAAATCACGTGCAGTCAGAACTTCACCTGAAACGAGTCCTGCAGGAGAACGACCTGGAATTCGACTCGAGatctttgaaaatgtttcgGGGACTTTTTACACAGACAGTTCGAAAAGAGCGAGGTCTGGGTAAGAGACTAGTCAAACCCCCGGAAATGTACAAAGCAACGGAAGTGGAAACAtcgaagaaggagaagaaaagtgTGGAACTGAAGGGAAAGAAGAGACCCAGGAAAGAAATGGTCAGGTGCGAGGTGTGCAAAATCAAAGTGCCGAGCTACCAGCTGGGAAAGCATCTCGTGTCGTACTACCACATCAGAAGAATGCAGCTAAACGATCCTGTCCAGAGAAACCTCATCCTCAGCAACATCCACGCCATTGTCAAACAGGCGCCGTATCAGTGCGGACTCTGCAAGTTCTACTGCAACACTCACGTCCTGTTCAAAAAACACTGGGCCCTGAGCGTCCACAAGGAGGCCGAGCAACAGCAAGGCCACAGGTTCTGGTGTGCTCTGTGTAACTTCGAGTGCGAAACGACCAAGTCCATGGAACTCCATCTGGACAGTAACTCGCACAGGGAAGTCATACAGGCCGTCAACAAGTCCATTCCCATCATCATAAGACACAAGTTCGTGTTTTCTTGTTCCATTTGTTTTAAAGAGTTTCGATTCAGCAGGGAACTGACACGTCACAGGGAGGTACATCACCCGGAGACGCTCGACGCCGACGCGGGAAACAAGTTCGCTTGCACCCTGTGCGATCAAAGTTTTAAAAGCATGAAGTCCCTTCAGAAGCACATAATTCACATGCACAAAGGTGACGTCAAAATTCCTTACTTCTGCAGTACCTGCAACGAATTCTTCGCGACTGTGACCGAAGCCAAAAATCACCGAAATGGACAGTTGCACAAGTATAAAAAGGCCCTGGCCGACAGCGGAGGGTTGCCTCAGAAGAAAGGACTCGTCAGGACGTGCACGTACTGTGGCGACACCCTGGAGAACATAGACAAACTCAAGAGTCACCTGTACGACAGACATCGGTCGCTCCTACCCAAATGCATCAAGTGCGGCATGACGTTCGCTCTGTCCCAGGAGGTGTCCCGACATGTCAAAAACAGAGAGTGTGACTTTTCCATCAAAAGGAGCGAAGGACCGGCTTCGGGAGCCTTCAAGTGTGACGTTTGCACATTTTCGACAGATTCTCAGTCGGAATTTCTCTTACACACTGCCATACACCAAAAGGGCAGGGAAGAGACAAAGAAAATCGCTTGTCCTCTCTGTGGAACTTCGTACACACAGGCGGCACTCAGCGTGCACCTGCGAACGCACCTGAAGGAGAAAACGTACCAGTGCTCGATGTGCTCCAGTACTTTCGTTAGAAAAGACCGCTACGTGGCTCACCTAAAGTCGAAGCATCTTCTGAAGGACGGCGAGGTTTCTGGCTCGAAGGACGCGGGAACAGAACAGGCGACACAAGAAAGTCAAAGGTCGACGCCAAAGGAAAACGAAGGTGAAGAAAGTGGAGAACTTGGACAGACGACAAGGGAAAACCAAAGTGGAAAATCCGCAACGGAAAAAAGGAAAATATGCGGAGATGCCAAGTGCAAGTACGTGGCCAAAGATGAGAAAGACCTGGAAACTCACAGCCTCGTTCACGTTGGTCCGAAAGTGTACAAGTGCCCGGAGTGCCCCTACTGCGCGAAAACAAATGCTGTGATGAAGAGGCACTACATGATACACATAGACGAGAAACAGTTCCAGTGTCCCCACTGCCCGTTCAAGGGACGTCTCAAATCGCACTTGAAACGTCACCTGAGACTTCACACGGGAGCGAAACCCTACAAGTGTCCTCACTGCTCCTACACCTGTAACATTCTGGAAAACCTGAGGAAACACGTGCTCAACACGAAAATCCACCCGGGGAAAAAGCTCTACGAGTGCAAGTTGTGCCGGTTCGAGACGAACGTGTCGAAAGACTTCAAAACGCATTTGTCGGAGAATCACAAGGAGAATTGTCGCGGGTCCGAAGAAGCCGTCATCGTTGCCGGCATATACAACAGGGAGGCGGATCTGACGAGCACGGCGACTCCGCTGCCGGGAAAGAGGAAAGTTTCCGCTGCATCTGCACCCAAgcCGCCGTCCGAAGAcctaaagagaaaaatagacTGCATAGCTCAGAAATACAGTCCGATCATGCCGAAGACTAGTCTGTTGGAGAAAAGAGAGAACGACCAGTCGTCGAAAAGCAAGAGAAATTTGGTCGAGGACAAGAGAAAAGTTCTGGAAATGGAGTTGGAGAAGTTGAAGAAGCAAATCAAACCGGAGAGAAGAGCGGCGAGGTCGTACCCGTCGCCGGCAGAGAAATTTCTGCAGAAGGCGACCAAAGCAGAAGATAAAATTGGACCAAATAAGGCgaaggaagaagacgaagaagtgGAGGCGACGGACGAGAGCGACGTGCTGCTGGTCAACTTGGGACCGACCGACACAGGCGGAGAGTTGACGGTCCAACAGGTGAAACTTCCGCCTGCGTACGTCCTGTGCGACGGCGGCAGCCTCACCCTGAAGGACAGCGAGTTTTACCTGCTGGAGGACTACGAcgtgtga
Protein Sequence: MEDSHYFLKSINLESYIDHEKNFCESLTREEMDNLDYSSLGYSKMKIEETGEKAQEMDIPGKTDGINEEVSQIMGSVHADDFFSSLELQSSSKMSSSVINFPSFPKMTCGIVTRSRSHVATSHDVSQKIIDKPGRKEKVKRQGKTVRNRVRKKVSKCKRDPDKGKKSKVRGRNSQVGKRSSLDVKSAAGSDGRKNSQSSVKTEDGVTVRGVPGDKNKEDDWVFFQHLGMRRDVSMEDKLLGHELNATGRRSTPELFSISPILMTDDMSEEKDKVDKLLSVDDYDETFLEEMEEFSNAPPRSHTGGKWKPGSLPVRSSPILWQSQNWESFLDDRNTNYEASGKITSETSVEPPVESHEGKGQSLVSTGGKWKSFAPPASHTGGKWKPMTPPATYTGGKWKPSEVPQRTKVVDNTEPSWKSQSSSSSSGPPISHTGGKWKPNSADHCREDLTSGKVKSNVPSPSHTHGKWVSGPVKGSSGRTPLDIVANSQRTSGKCLKTSGGMIQYYCSPCNRRLSSKKMYRNHVQSELHLKRVLQENDLEFDSRSLKMFRGLFTQTVRKERGLGKRLVKPPEMYKATEVETSKKEKKSVELKGKKRPRKEMVRCEVCKIKVPSYQLGKHLVSYYHIRRMQLNDPVQRNLILSNIHAIVKQAPYQCGLCKFYCNTHVLFKKHWALSVHKEAEQQQGHRFWCALCNFECETTKSMELHLDSNSHREVIQAVNKSIPIIIRHKFVFSCSICFKEFRFSRELTRHREVHHPETLDADAGNKFACTLCDQSFKSMKSLQKHIIHMHKGDVKIPYFCSTCNEFFATVTEAKNHRNGQLHKYKKALADSGGLPQKKGLVRTCTYCGDTLENIDKLKSHLYDRHRSLLPKCIKCGMTFALSQEVSRHVKNRECDFSIKRSEGPASGAFKCDVCTFSTDSQSEFLLHTAIHQKGREETKKIACPLCGTSYTQAALSVHLRTHLKEKTYQCSMCSSTFVRKDRYVAHLKSKHLLKDGEVSGSKDAGTEQATQESQRSTPKENEGEESGELGQTTRENQSGKSATEKRKICGDAKCKYVAKDEKDLETHSLVHVGPKVYKCPECPYCAKTNAVMKRHYMIHIDEKQFQCPHCPFKGRLKSHLKRHLRLHTGAKPYKCPHCSYTCNILENLRKHVLNTKIHPGKKLYECKLCRFETNVSKDFKTHLSENHKENCRGSEEAVIVAGIYNREADLTSTATPLPGKRKVSAASAPKPPSEDLKRKIDCIAQKYSPIMPKTSLLEKRENDQSSKSKRNLVEDKRKVLEMELEKLKKQIKPERRAARSYPSPAEKFLQKATKAEDKIGPNKAKEEDEEVEATDESDVLLVNLGPTDTGGELTVQQVKLPPAYVLCDGGSLTLKDSEFYLLEDYDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -