Pser007583.2
Basic Information
- Insect
- Polyplax serrata
- Gene Symbol
- ZNF775
- Assembly
- GCA_037055365.1
- Location
- JAWJWE010000037.1:5338873-5341879[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 2.7e-05 0.0015 18.3 0.9 1 23 145 167 145 167 0.95 2 15 0.017 1 9.4 5.1 1 23 173 195 173 195 0.97 3 15 2.8e-06 0.00016 21.4 1.4 1 23 301 323 301 323 0.97 4 15 0.17 10 6.3 3.8 1 19 329 347 329 352 0.89 5 15 0.001 0.06 13.3 4.7 1 23 383 405 383 405 0.98 6 15 0.0085 0.49 10.4 0.3 1 21 415 435 415 436 0.95 7 15 0.33 19 5.4 2.1 1 23 443 466 443 466 0.89 8 15 0.0013 0.074 13.0 2.2 2 19 474 491 474 495 0.95 9 15 0.00022 0.013 15.4 3.5 1 23 501 525 501 525 0.98 10 15 8.8e-05 0.0051 16.7 0.3 2 23 532 553 531 553 0.97 11 15 3e-05 0.0018 18.1 0.5 1 23 562 584 562 584 0.97 12 15 0.0006 0.035 14.0 0.1 3 23 592 612 590 612 0.97 13 15 4.8e-05 0.0028 17.5 0.3 1 23 618 640 618 641 0.96 14 15 0.08 4.6 7.3 0.0 1 23 655 677 655 677 0.90 15 15 0.74 43 4.3 0.0 1 16 927 942 927 946 0.90
Sequence Information
- Coding Sequence
- ATGACTGAAGTACATCACAATATGAGTTGGGCTCAGAGTAACCCAGGCCTAGTTGAAGAGGAAGTTATTTATGGTGGCACAGAATATATTATGCcacataaaatggaaaataatatgaGGTACATAACTATTCCAGAGGAGGTGCCAATGATAGTGATTGAAAGCAATCAAGTTTCTGCTGAGACAGATGCACCAATGATAATTGTTGGAAATGATGTAGCAGAGCAAATGATTTGTGGCGAGGAGGAAGTTGAAACAGAAACTGACATGTCTTGGTATAATAATCCTCCTGTAGCCCATGAGGAGACAGTTGACACAGAACCACTCCCAAAGAAACCTGCAAAGCGTGAAGGAAGAGTTGCTGTGCCATACCTAAAGGAAGAAGCACTTGACATACCACTTAATGATGAAAGCTATGCTACTTATCACCCATTTCCTTGTGACTTTTGTAGTAGAAGATTTAAGAAAAAGGCCAACCTAATGAACCATATGGTGGCACATCAAACACAAAGGCCTCATTCATGTAGTATTTGTTCCTCACGCTTCATGAGAAAATGTGACCTTGTCAATCAtcaaaaaatacattcataTGTTCCAAACAGGGAAAATAGAGATGATATTGATCAAGAAGTGAAGTATAATTATCAGAGTGtgagaaaaaagaatgcaaaaaagggaaaaactatatacaacaaaaaaggaaCATCTAAGGATAAGGTTAAAACATCATTGTCACCTCAGGATAACACCAGTTTCTTCAAACCCACAAGTTATGTTGATGAAGATGTTAAACTTTTACTTGAAATGACAAACAGGCTGCATGAAAAAAGTGGAAGCAGCGATAAGGTTACAAATAAAGATTCATCAGGAGAAGTATTTACAGGCAGTGAGCAAAAACCATATGTTTGCAATAAATGTGGCAGATGTTTTTCTAGAGAAAGTGCTCTTGTTTCACATTCTCAAATTCATGCAGAGGATGTTTCCTATGATTGTGGTAAATGTACACAAAGTTTCTTTACTCTGGACCTCTTAAGAGACCATTGCTCTAAAAAGCATAACATTCCATACACAGGTGAAACCTCTGATGACAGTGAAGAAAGAGAACTTGTAAAGGGAAAATACACAGGAGATGAAAGGTTTGGAACATTTCATTGCTCCATATGTTCCATTAGTTTTCATAGGTTAGACCTATTGAAACAGCATAAGAGGATTCATTCTAAAAAGGATGATGGTTCAGGTTTTTATAAATGCAATACTTGCATGGCATCATTTTCTACCAATGAAAAACTGTTGTCACACCTTGAAAGCAGTGCAAGTTGCCAAAGGCATATGTGCTTGCTTTGTGGTGAACATTTCAGTGATCAGATCACAGGGCAGAAGCACGTTCAACAGAAACACAGTCGGGAGTTGGCTCCAAATTCTTGTACGATATGCGGGAAATTTTGCAAAGATAAAACCGCACTACAAAAGCATTCTTGGATTCATtcaacagagaaaaaatattcatgcAAGAAGTTAGATTGCTCCAAAAAGTTTCATAGTTGGGCGCGATTAAGGAGACATATGTTGTCTCACAACGGTAGTAAAATGGTCCGCTGCGAGGAGTGTGACGAGGTGTTTCCTGACAGAAGAGCACTCATCAATCATCGACACAGTCATTTTCCAGATTCTACCGCTCGTAAATTCATTTGCAACGAATGCGGAAAATCGTTTGGATCGAGAAGTAGTCAGCAAATTCACAACAGAATTCACACCGGTGAACGACCTTACGGGTGCCGGTATTGTTGGAAAGCTTTCGCGGATGGTGGAACTCTACGGAAACATGAAAGAATTCACACAGGAGAAAAACCCTATGTTTGCGTCGTTTGTCCGAGAGCCTTTAACCAGCGGGTCGTACTACGAGAACACATCAGGTCTCATCATTCAGGTTCTGTCTGCAAACCCGGTTATTCAACACCAGTGTATCTGTGCCCCGTGTGCGGCATTGTAACGGCAAATTCCGAAGAACTGGCTTTTCATCTAGTTAAACACAGTGATGATAATACAATCAGAAACAGAAATCCACAGACAGGAATACGTACATATAAACGCAGGCGAAAGTTGAATTCGTACGAATACGACGAGAATGAATTTGACGAGTCcgatttttacataaaaaaggaaagtgaGACAGAGTCGGCTTTATCGGACAAAGAGCAAGCAAAAAAACCGGCGGGTAGGAAGGGTGCTCGCAGCAAAAAAGTGGACACTTATTCAAAGTTCACTAAAACGTTTGAAGCCGCcatgaaaaatataagttcGCTGGTGGAAAGCAAGCCGGCACGGAAAGCAAAGATGATAAACACGAAGGCAAAGGCGAATgtcaaaaaaagtaaaaaagtaataacgAAGAGGGGCAGGAAACGAAACACAAGTGTTTCAGCCAAAAATGCAGCAGTAAAACCCCGGACTAGAGTCATGTCAGGGAGAAGGAAAGACAGCTTCAATGAGTCAACGAGCGCGGTGGAGAGCACACCTGGGCCGGCTACACCAACGGAAGAAGTAAGAGTCAGACCAACGAGACCGCGAACCAAAAACGTAAATTATGATCAAATGGAAGAGCCACTGCCCGATGTAGCCACTTTTCCGGAGAAGTCAAAGAAGTTGATTAGGAAACCGGCCGTGTTTCAAAGGAAAGTGGACGTGAAGAAGGAACCCTCGGAGGACCTTTTAACTGACATGAAGCCTAAAGTGAAGGTGGAAGTCTCCGATGAGACGACGGCGTCCAAACAAGACAATTACATTTGCGGCATCTGTTCGAATGCTTTTCCCAGCAAAGCAGACCTCCTTTTCCATGTGCCTATCCATATATAG
- Protein Sequence
- MTEVHHNMSWAQSNPGLVEEEVIYGGTEYIMPHKMENNMRYITIPEEVPMIVIESNQVSAETDAPMIIVGNDVAEQMICGEEEVETETDMSWYNNPPVAHEETVDTEPLPKKPAKREGRVAVPYLKEEALDIPLNDESYATYHPFPCDFCSRRFKKKANLMNHMVAHQTQRPHSCSICSSRFMRKCDLVNHQKIHSYVPNRENRDDIDQEVKYNYQSVRKKNAKKGKTIYNKKGTSKDKVKTSLSPQDNTSFFKPTSYVDEDVKLLLEMTNRLHEKSGSSDKVTNKDSSGEVFTGSEQKPYVCNKCGRCFSRESALVSHSQIHAEDVSYDCGKCTQSFFTLDLLRDHCSKKHNIPYTGETSDDSEERELVKGKYTGDERFGTFHCSICSISFHRLDLLKQHKRIHSKKDDGSGFYKCNTCMASFSTNEKLLSHLESSASCQRHMCLLCGEHFSDQITGQKHVQQKHSRELAPNSCTICGKFCKDKTALQKHSWIHSTEKKYSCKKLDCSKKFHSWARLRRHMLSHNGSKMVRCEECDEVFPDRRALINHRHSHFPDSTARKFICNECGKSFGSRSSQQIHNRIHTGERPYGCRYCWKAFADGGTLRKHERIHTGEKPYVCVVCPRAFNQRVVLREHIRSHHSGSVCKPGYSTPVYLCPVCGIVTANSEELAFHLVKHSDDNTIRNRNPQTGIRTYKRRRKLNSYEYDENEFDESDFYIKKESETESALSDKEQAKKPAGRKGARSKKVDTYSKFTKTFEAAMKNISSLVESKPARKAKMINTKAKANVKKSKKVITKRGRKRNTSVSAKNAAVKPRTRVMSGRRKDSFNESTSAVESTPGPATPTEEVRVRPTRPRTKNVNYDQMEEPLPDVATFPEKSKKLIRKPAVFQRKVDVKKEPSEDLLTDMKPKVKVEVSDETTASKQDNYICGICSNAFPSKADLLFHVPIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01165058;
- 90% Identity
- -
- 80% Identity
- -