Basic Information

Insect: Polyplax serrata
Gene Symbol: -
Assembly: GCA_037055365.1
Location: JAWJWE010000039.1:6264369-6273480[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 25 4.6 2.7e+02 1.8 0.3 1 23 285 308 285 308 0.88

2 25 0.011 0.62 10.1 4.0 1 23 313 335 313 336 0.96

3 25 0.00056 0.032 14.1 1.2 3 23 349 369 348 369 0.98

4 25 0.00052 0.03 14.2 2.1 2 23 376 397 375 397 0.96

5 25 0.075 4.4 7.4 1.4 1 16 403 418 403 420 0.93

6 25 0.74 43 4.3 0.1 3 23 571 591 569 591 0.94

7 25 3.5 2e+02 2.2 1.3 2 23 595 615 594 615 0.92

8 25 2.4 1.4e+02 2.7 1.9 3 23 622 641 621 641 0.96

9 25 0.0011 0.066 13.2 0.2 2 23 657 679 656 679 0.95

10 25 0.67 39 4.4 2.4 3 23 765 786 764 786 0.96

11 25 0.017 1 9.4 0.7 1 23 792 815 792 815 0.95

12 25 2.1e-06 0.00012 21.8 0.1 1 23 821 844 821 844 0.98

13 25 0.0033 0.19 11.7 2.0 2 23 851 872 850 872 0.97

14 25 0.0016 0.093 12.7 1.6 1 23 878 900 878 900 0.99

15 25 0.0056 0.32 11.0 1.4 1 23 906 929 906 929 0.94

16 25 0.33 19 5.4 0.7 2 23 1008 1028 1007 1028 0.95

17 25 0.0016 0.091 12.7 3.7 1 23 1034 1056 1034 1056 0.97

18 25 1.9e-06 0.00011 21.9 2.6 1 23 1062 1084 1062 1084 0.96

19 25 4.8e-06 0.00028 20.6 0.5 1 23 1090 1112 1090 1112 0.98

20 25 0.0077 0.45 10.5 0.4 3 23 1276 1295 1274 1295 0.96

21 25 0.0028 0.16 11.9 1.8 3 23 1303 1323 1301 1323 0.95

22 25 0.0018 0.11 12.5 2.6 1 23 1329 1351 1329 1351 0.92

23 25 0.00013 0.0073 16.2 0.4 1 23 1357 1379 1357 1379 0.98

24 25 5.3e-05 0.0031 17.3 1.6 1 23 1385 1407 1385 1407 0.98

25 25 0.00046 0.027 14.4 1.0 1 23 1414 1437 1414 1437 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	25	4.6	2.7e+02	1.8	0.3	1	23	285	308	285	308	0.88
2	25	0.011	0.62	10.1	4.0	1	23	313	335	313	336	0.96
3	25	0.00056	0.032	14.1	1.2	3	23	349	369	348	369	0.98
4	25	0.00052	0.03	14.2	2.1	2	23	376	397	375	397	0.96
5	25	0.075	4.4	7.4	1.4	1	16	403	418	403	420	0.93
6	25	0.74	43	4.3	0.1	3	23	571	591	569	591	0.94
7	25	3.5	2e+02	2.2	1.3	2	23	595	615	594	615	0.92
8	25	2.4	1.4e+02	2.7	1.9	3	23	622	641	621	641	0.96
9	25	0.0011	0.066	13.2	0.2	2	23	657	679	656	679	0.95
10	25	0.67	39	4.4	2.4	3	23	765	786	764	786	0.96
11	25	0.017	1	9.4	0.7	1	23	792	815	792	815	0.95
12	25	2.1e-06	0.00012	21.8	0.1	1	23	821	844	821	844	0.98
13	25	0.0033	0.19	11.7	2.0	2	23	851	872	850	872	0.97
14	25	0.0016	0.093	12.7	1.6	1	23	878	900	878	900	0.99
15	25	0.0056	0.32	11.0	1.4	1	23	906	929	906	929	0.94
16	25	0.33	19	5.4	0.7	2	23	1008	1028	1007	1028	0.95
17	25	0.0016	0.091	12.7	3.7	1	23	1034	1056	1034	1056	0.97
18	25	1.9e-06	0.00011	21.9	2.6	1	23	1062	1084	1062	1084	0.96
19	25	4.8e-06	0.00028	20.6	0.5	1	23	1090	1112	1090	1112	0.98
20	25	0.0077	0.45	10.5	0.4	3	23	1276	1295	1274	1295	0.96
21	25	0.0028	0.16	11.9	1.8	3	23	1303	1323	1301	1323	0.95
22	25	0.0018	0.11	12.5	2.6	1	23	1329	1351	1329	1351	0.92
23	25	0.00013	0.0073	16.2	0.4	1	23	1357	1379	1357	1379	0.98
24	25	5.3e-05	0.0031	17.3	1.6	1	23	1385	1407	1385	1407	0.98
25	25	0.00046	0.027	14.4	1.0	1	23	1414	1437	1414	1437	0.96

Sequence Information

Coding Sequence: ATGAGTAAGAGTGAAAGACAAGTGCtagattttgaaaaaatttgcaGACTATGTCTACTAGAAAAGCGTTCCATGTCGgcaattttttcaaagaaaaaaagtgatAAAAAGGTGCCTTTACCCGTACGAATAATGACTTGTGCATCACTAGAGCTTTACGAAGGAGATGGGTTACCTTCTTCAATATGCAGTAAATGTCTCTTGAGTGTTAACCAGTCATATGCATTTAGAGAGCAGTGTGAACAAGCAGACACAACTCTTAGACAATATGctcaaaaattgaatgaaaccaATGAAGATGCCTCTATGAAAAAAACGATGGGTCTCAATTCACTACCAAGTGTTGAAGATGTCCGACGGATGGACTCGGAGACAGATGTATCGAAGTCGAACGGTTTTGTTGACTTCAGGTTCAGTTTTGAGGGTACAGAGGGGCCGCTAATAGGGAACGTATCTCAGGAGATAGTCGCCCTGGTTAAGAGCCTTTCTCAGGCTCGGGTGCCAAAGAGAGAAGTGTCGGATGATATAAAGTTGTTTAACAAATTGTTGAAGAATAAAGACGTtgtagttgaaaaaaaatctctggaaaaggaaaaggagcACGTGGTGACggatgagaaagaaaaatggctgATAATTAGGAGACTGTCGCAGAGTGGTAAAGTTCCCTCGGGAGAAACCGAAGATTTGTCTCTTGATGCCAGCGAATCGACGCTGAAATGTTTGGATGCCATGGTGAAAAATCCGAAGAAGCAAGATGATTCGTTGGTTTTCTGCAAGGAATGCAATCTGTTTTTGAAACGGACTAGTTTTAGCGGTCACAACCGGTTTGTGCACAAAAAGATTCGCAGTTTTCTGTGTCAGACGTGTGGGTATGCCGCTCATACAGGAAGCATTCTGCGACAACACATGCAGGCTGTTCACGTAGGCTACATATTCGAATGCAACAGCTGCCCAAAAAAGTTCAACCTGATGAAGCGATTGAAAAAGCATCAGGAGATGCACCATTTTAACACACAAAATGTGtccgagaagaagaaaatttgtcaCTATTGTGGGCTTGCATTTTTAAGGTTGTCTTACCTGAAAACTCACCTCCTCACACACACCGGTGAAGCACCGCTGCAGTGCCAGTACTGCAGccgaaagtttaaatttcgcTGGGCCCTGAAGCAGCACGAGAGACTTCACACGGGTGTCAAACCTTACAAGTGTCAATTCTGTCAAGAAGTATTTACACAGAACAAAAAATTATACGATTCTGTTGAGGACGGGTTTGAGGAGACAGAGGTTAAAATCGAAGGAACGGAAGAGGATAACCAGGAAGAGGAAACTTTGCGAactggagaagaagaagaagaagaagaagtggcgGATGAACAAGAAGGTGACGGAGTGACAAATATGGACGACGTCgaaattgaatatttggaagaaaaatatttgacagaTACAAACGATGAAGACGACGAAGAGAGAGAAGACTTCATGACTACTGGGGATATGACCCAAGTTGAAGGAGAAGAACATGTACTAATTACGTCGGAAGGAGAAACGACCGCTGTTATCCTGCCGAAAGGTATCAAGGTAGAAGAAGCGTGGGAGGTGGATGGTGAAGAATTACCCTTCATGTTGGTTGGGGCAGAGGGAGAAGAAGTGTTGGAAGAGGTCTCGGAAGACATGCCGGACGATGGAGAAGATGTTGTGATATGTAGTTTTTGCAATAAGCCCATCCGCAGCGACGGGTTTGAGGAACACTTAAGGCTGATACATACATTCAAATATTGTGATTTGTGTAACACGGAAGTGAAGGAGAAATTCTTTAAAGCTCACATGAAGTCGCACGAGGAGAGCAAAGTATTCTGCGAATTGTGCAATAAGCTCGTTAGAAAACAAGACTTTATAACACATTACAAGAAACACCAGGGACTAGACACGGTCGACAAGCGAGAAAAGGTGAATCGAAAAGTGTGCGATATATGCGGGTATCAGGTGGAGGGAAAAGGTACCCTTAACAAGCATATGAGAGAGAAACATGACGAGGGACAGAACTACTGCGACCTATGCGAGAAGTATGTGTGGATTAAATGCTACGACAAACACGTAAAAGACGTGCATGAAGACCGAGAAGACTTCTGTATGACCTGTCAGAAGTGGTTCAAGTATTATAAGACTCACATGAGAACGTCCCATAAAGACGTCATCCGGTTCTGCGATTATTGCCAAGTAGACATCGAGGCTGCAGGTTTCGATGTCCACATGTCAACGGTCCACTCCAAGCAGAGCCGGCTCTGCGAGACGTGCAACAAGgaattttttgagtttgtaTGTTACAAGAATCATGTCCGAAACATTCATCTGAAGGTGAAATCTTACAAGTGTTCAGAATGCGATTTCACGACGGCCTACAGGACTTCCATGGATAAGCACATATtaggcacacacacacgaaacCAGAAATACGTCTGCGAGATATGTGCTAAAGAATTTATTGTGAAGGACAACTTGCGAAAGCACATCAGGATGATTCACAATGGTCAGCAGAAGTCTGTGTGCACATACTGCGGAAAGGTGTGTCACGCGAATCGCGAACTCATTAACCATGTACGACTTCACACTGGAGATCTGCCCTACCAGTGCGAGTTCTGTCTGAGGAAGTTTCCGAAGAAGTGGACACTGGACAACCACAGGCGAATACACACTGGGGAAAAGCCCTACAAGTGCACCCACTGCGACTCTGCCTTTGGCACCTCAGCCCAGATGAAGATCCACGAATTCAGGGAACATGGGAGAACAGAGGTGCCTAGTCTAGTCATTCGCTCCGAGCAAGTTGAAGACGGAGGCAAAGGTAGAACTGTAGGGGTTACCAAGACGGATGAAAAAGTCtgcgagaaagaaaaaggcgttgaaattgtaattagtaCTAGTACAAGTGGCAAATCCGGAGTAGTTGAAGGTCTAGGATGTGTCGATCCGTCTGGAATGGATACCGCAGCGGTGGCCCGAAGATATGGGAAGAAACAGTGCTTAGAATGTGGCAAGGTTGTGTTACGGAAGAATTACCTTACCCACACTAAGGTCCATTCTTTGTTGAAGCCCCACATGTGTGACCTGTGTGGCGTGTGCTTCAAAGACAGACGAGTACTCACAGGGCACAGGAGAACTCACACGGGCAAACGTCCGCATGCTTGCGACTTGTGCCCCCGAACGTTCCGGTCTAAAAAGGATTTGACTCGGCATGTGAGGACGCATACCGGCGAGAAGCCCTACGTGTGCGCTTTCTGCGGAAAGGGATTTTCCTTCAGCTGGAATTTGAGGGAGCACACTAGAATGCACACTGGAGAACTACCTTACtGTTCAACCTCCGAGCAAAAGGCCGAACTGGAGGATTCGTCGGCCTGCTTCGATTACCTTCAGGTGGAAGTCACGAGTCCTTCCAACCCGTCCGAGGCCACGACAGCTCCACCCGTGGCGGACAACGAAATGAAAGACCATGGTAGTGTAAATGTGAAGGAGGAGACAAGTGGCCATACGGAGTTCAAGGAGGAATGGGGTGAGGACGACTCGGAGCCGTTAGCAACGATCAAAGTCGCTGAGGCTAGACATAGACAGAAACGGGGCGAAGTAAAAACCAGAAACTGTGATAGTAGTGAGACGGCCGTGGAGGGGCCAGaggaatcattaaaaatttcaaaagtcaaaaacgAGTCGTCTTCCGGGGtgaccaaaattaaaataccgaAGCCTCCGAAGGTACCCAATAAGCAGGCAGTGAACAGTAAACCTCCCAAGCGGGACAGAGTCCTTAAACCGCAGTTTATTGATTGCGAAGTCTGTGGTAAAAGTGTGCAGAGGCGAAAGTTCAAGTTGCACATGATGGTGCACAACGGGGAGAAGCCTCACTTGTGCGACACCTGTGGAAAAAGCTTTACGTGGAAATTTGCTTTAGTCACCCATAAGAGGGTGCACTCAGGTGAGAAACCCTACCTGTGCAAGCACTGCGGTCAGAGTTTTCGATCTTCCTCGAGGTTCGCCGAACACTCGACCATACATACAGGACGTAGGTCGTATGTATGCGAAAGGTGTGCATTGGCCTTTCGCACAAGCGGCAGGCTAAAGAGGCATCTGAGGATACACACGGGGGAGAAACCCTACATATGCTCGTTTTGCGAGCGTGGCTTCTCGGAGAGCTACAATCTTAAACAACATAGGCGGCTGCATACTGGAGAAAAACCTCCCCACGTTTGCTACGTTTGCTCGCAAGCATTCATCAGAAAGAAAATGCTGATTGATCACCTTCGGATACGACACGGTGTCACGCATCCGAGCCTTGAAGCTctacagcagcagcagcaacaacagtCACAACAGCAGGAACCGTCACACGAGCAACCACCACCGCCACCTCAAATTCGACAGGTTCTAGTTGACACCCAAAGACCGGACGGCGCAGACACTTTCATCGAATGTGGTGGCAATAGCAATGAAAATACCATCTTGAGCCTCACTTTGTCGTACGAAGACCAAAAAGGATTTAATAAGACATTTCCGAAATACATGACTGAGTATAAATGA
Protein Sequence: MSKSERQVLDFEKICRLCLLEKRSMSAIFSKKKSDKKVPLPVRIMTCASLELYEGDGLPSSICSKCLLSVNQSYAFREQCEQADTTLRQYAQKLNETNEDASMKKTMGLNSLPSVEDVRRMDSETDVSKSNGFVDFRFSFEGTEGPLIGNVSQEIVALVKSLSQARVPKREVSDDIKLFNKLLKNKDVVVEKKSLEKEKEHVVTDEKEKWLIIRRLSQSGKVPSGETEDLSLDASESTLKCLDAMVKNPKKQDDSLVFCKECNLFLKRTSFSGHNRFVHKKIRSFLCQTCGYAAHTGSILRQHMQAVHVGYIFECNSCPKKFNLMKRLKKHQEMHHFNTQNVSEKKKICHYCGLAFLRLSYLKTHLLTHTGEAPLQCQYCSRKFKFRWALKQHERLHTGVKPYKCQFCQEVFTQNKKLYDSVEDGFEETEVKIEGTEEDNQEEETLRTGEEEEEEEVADEQEGDGVTNMDDVEIEYLEEKYLTDTNDEDDEEREDFMTTGDMTQVEGEEHVLITSEGETTAVILPKGIKVEEAWEVDGEELPFMLVGAEGEEVLEEVSEDMPDDGEDVVICSFCNKPIRSDGFEEHLRLIHTFKYCDLCNTEVKEKFFKAHMKSHEESKVFCELCNKLVRKQDFITHYKKHQGLDTVDKREKVNRKVCDICGYQVEGKGTLNKHMREKHDEGQNYCDLCEKYVWIKCYDKHVKDVHEDREDFCMTCQKWFKYYKTHMRTSHKDVIRFCDYCQVDIEAAGFDVHMSTVHSKQSRLCETCNKEFFEFVCYKNHVRNIHLKVKSYKCSECDFTTAYRTSMDKHILGTHTRNQKYVCEICAKEFIVKDNLRKHIRMIHNGQQKSVCTYCGKVCHANRELINHVRLHTGDLPYQCEFCLRKFPKKWTLDNHRRIHTGEKPYKCTHCDSAFGTSAQMKIHEFREHGRTEVPSLVIRSEQVEDGGKGRTVGVTKTDEKVCEKEKGVEIVISTSTSGKSGVVEGLGCVDPSGMDTAAVARRYGKKQCLECGKVVLRKNYLTHTKVHSLLKPHMCDLCGVCFKDRRVLTGHRRTHTGKRPHACDLCPRTFRSKKDLTRHVRTHTGEKPYVCAFCGKGFSFSWNLREHTRMHTGELPYCSTSEQKAELEDSSACFDYLQVEVTSPSNPSEATTAPPVADNEMKDHGSVNVKEETSGHTEFKEEWGEDDSEPLATIKVAEARHRQKRGEVKTRNCDSSETAVEGPEESLKISKVKNESSSGVTKIKIPKPPKVPNKQAVNSKPPKRDRVLKPQFIDCEVCGKSVQRRKFKLHMMVHNGEKPHLCDTCGKSFTWKFALVTHKRVHSGEKPYLCKHCGQSFRSSSRFAEHSTIHTGRRSYVCERCALAFRTSGRLKRHLRIHTGEKPYICSFCERGFSESYNLKQHRRLHTGEKPPHVCYVCSQAFIRKKMLIDHLRIRHGVTHPSLEALQQQQQQQSQQQEPSHEQPPPPPQIRQVLVDTQRPDGADTFIECGGNSNENTILSLTLSYEDQKGFNKTFPKYMTEYK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -