Basic Information

Insect: Polyplax serrata
Gene Symbol: ZNF236
Assembly: GCA_037055365.1
Location: JAWJWE010000037.1:3615415-3620762[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 27 0.0011 0.066 13.2 2.4 1 23 266 288 266 288 0.97

2 27 0.015 0.9 9.6 2.0 1 23 295 317 295 317 0.98

3 27 7.9e-05 0.0046 16.8 0.4 2 20 323 341 322 344 0.92

4 27 0.0005 0.029 14.3 0.3 3 23 352 372 351 372 0.97

5 27 0.49 28 4.9 3.7 2 23 392 413 391 413 0.88

6 27 6.3e-07 3.7e-05 23.4 0.3 2 23 443 464 443 464 0.97

7 27 1.2e-05 0.00072 19.3 0.9 1 23 470 492 470 492 0.98

8 27 0.016 0.91 9.6 3.0 1 23 498 521 498 521 0.94

9 27 1.3 75 3.5 5.9 1 23 531 554 531 554 0.92

10 27 2.7e-07 1.6e-05 24.5 1.4 1 23 673 695 673 695 0.98

11 27 5.5e-05 0.0032 17.3 4.7 1 23 701 723 701 723 0.99

12 27 2.9e-05 0.0017 18.2 3.2 1 23 729 751 729 751 0.98

13 27 0.0096 0.56 10.2 3.5 1 19 757 775 757 781 0.93

14 27 0.00024 0.014 15.3 5.0 1 23 836 858 836 858 0.97

15 27 0.00013 0.0077 16.1 2.5 1 23 864 886 864 886 0.98

16 27 0.00043 0.025 14.5 1.8 3 23 894 915 892 915 0.97

17 27 9.7e-05 0.0056 16.5 4.6 1 23 921 943 921 943 0.98

18 27 0.0021 0.12 12.3 2.1 1 23 1134 1156 1134 1156 0.98

19 27 0.00041 0.024 14.6 0.3 1 23 1162 1184 1162 1184 0.98

20 27 0.00032 0.019 14.9 2.0 1 23 1190 1212 1190 1212 0.98

21 27 1.7e-07 1e-05 25.2 0.9 3 23 1291 1311 1290 1311 0.98

22 27 6.3e-06 0.00037 20.2 5.8 1 23 1317 1339 1317 1339 0.99

23 27 0.00021 0.012 15.5 1.0 2 23 1346 1367 1345 1367 0.97

24 27 1.2e-05 0.0007 19.4 1.7 1 23 1373 1395 1373 1395 0.98

25 27 1.5e-07 8.8e-06 25.3 1.6 3 23 1559 1579 1558 1579 0.97

26 27 1.5e-06 8.5e-05 22.3 0.5 1 23 1585 1607 1585 1607 0.97

27 27 1.4e-05 0.00081 19.2 2.2 1 23 1613 1636 1613 1636 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	27	0.0011	0.066	13.2	2.4	1	23	266	288	266	288	0.97
2	27	0.015	0.9	9.6	2.0	1	23	295	317	295	317	0.98
3	27	7.9e-05	0.0046	16.8	0.4	2	20	323	341	322	344	0.92
4	27	0.0005	0.029	14.3	0.3	3	23	352	372	351	372	0.97
5	27	0.49	28	4.9	3.7	2	23	392	413	391	413	0.88
6	27	6.3e-07	3.7e-05	23.4	0.3	2	23	443	464	443	464	0.97
7	27	1.2e-05	0.00072	19.3	0.9	1	23	470	492	470	492	0.98
8	27	0.016	0.91	9.6	3.0	1	23	498	521	498	521	0.94
9	27	1.3	75	3.5	5.9	1	23	531	554	531	554	0.92
10	27	2.7e-07	1.6e-05	24.5	1.4	1	23	673	695	673	695	0.98
11	27	5.5e-05	0.0032	17.3	4.7	1	23	701	723	701	723	0.99
12	27	2.9e-05	0.0017	18.2	3.2	1	23	729	751	729	751	0.98
13	27	0.0096	0.56	10.2	3.5	1	19	757	775	757	781	0.93
14	27	0.00024	0.014	15.3	5.0	1	23	836	858	836	858	0.97
15	27	0.00013	0.0077	16.1	2.5	1	23	864	886	864	886	0.98
16	27	0.00043	0.025	14.5	1.8	3	23	894	915	892	915	0.97
17	27	9.7e-05	0.0056	16.5	4.6	1	23	921	943	921	943	0.98
18	27	0.0021	0.12	12.3	2.1	1	23	1134	1156	1134	1156	0.98
19	27	0.00041	0.024	14.6	0.3	1	23	1162	1184	1162	1184	0.98
20	27	0.00032	0.019	14.9	2.0	1	23	1190	1212	1190	1212	0.98
21	27	1.7e-07	1e-05	25.2	0.9	3	23	1291	1311	1290	1311	0.98
22	27	6.3e-06	0.00037	20.2	5.8	1	23	1317	1339	1317	1339	0.99
23	27	0.00021	0.012	15.5	1.0	2	23	1346	1367	1345	1367	0.97
24	27	1.2e-05	0.0007	19.4	1.7	1	23	1373	1395	1373	1395	0.98
25	27	1.5e-07	8.8e-06	25.3	1.6	3	23	1559	1579	1558	1579	0.97
26	27	1.5e-06	8.5e-05	22.3	0.5	1	23	1585	1607	1585	1607	0.97
27	27	1.4e-05	0.00081	19.2	2.2	1	23	1613	1636	1613	1636	0.97

Sequence Information

Coding Sequence: ATGGATGACATAAGCAGTCCTGCAAAATCTGAAACCATTTGTAATGATATTGCTCCTTTCATAATAGAACTGGAAAGAAGAGGAGCAGTGTGTGTTAAAGGAGATTCAGTATATGAATTAACAAAGTATGATGGAAGTAAAGTTCAAGTTACTGGTCTTGTGTCACAAGgaggaatttcattttttccaatgCCTTCAGAACTGGCACCAAATgataatatatatgtagaaCAACCACTCTTCATTAATGTGCCCATTGAAAATcatcaaaatgaatttgtacTGGATGAAGATGTGGTTCCTGTCCCTCTGGATGATGTTGTATCTAAAAAAGACTTTCAAGAAATTGATAGTTATGAAATATCAGATACAATTACTTCAGATATTGGCCaattttctgaatttgaaaataaggTTTCAATTTTGGAGTTAGTGGATGCAccagaattaaaagaaaaatctgtGCCCCAATCTGTGATAAAAAAGCATTCATCATCTGATATTACTTGTGAGGTAACACCTAGTGACTTGTTATCTACATTTGTGAttgatggaaatgaaaatttaggcAATGTAAAAGCAGATGTCAATGGGGACATAATAAACAGTGAAATTGTGGCCAGTCTTGAAGAACAGGTTAGTGAAAGTATAGGTGACTCAAAACTAGATGCAGctctaaatattatttcaaaaccaaaagaattaataaatcaaaggaCAGAGGAGACAACAAACACAAAGAGAGGCCGCCCTAAGAAAGATAGGGAAATTCAACCACCCCTAAGAAAGGGACCCTTTATTTGTGAAGTATGCCACACTAAAGTTACTACCTGGTCGCAGTTCAAATCACACAAACTAATGCATTCAGAAGAGAATAAGCCTTATACATGTAAAGTATgttgtttaagttttaatgttgAGAAAAACTTGAACCTTCACATGTTATTACACAATGTGGGCAATCTAACATGCCcagaatgtaataaaacatttactaGATTTGCATCATTTAAAGCACATTTACCAATTCATGAGGAAGAAGAGAATGTGTTTTGTTCCGAATGTGGAGATGAGTTTACAAGCAATTCACAATTAGAACAACATCTACAGGAGCACAGAAATGAATGGGAAAAGGCGCTCTCAAATGAGGATGCAGAGCCGAAAAATATTCTGTCATGTAAAACATGTAATAGAATGTTTACCAATCCTATAACTTTTGAATGTCATAAAAAGGATCACCAAAGGTTGAAGAATCAACTGTTGGCACTGGCGcccaaaagaaagagaaaacgattTCGAAATGCATCAGGTGGAAACTACGGGAATGAGTGTTCTATTTGTAAAAAGACTTTTCCGAAACCTAGTCAACTTGTGAGACATATCAGAATTCACACAGGTGAAAAACCTTTCAAGTGTACCACTTGCTCAGCAGCATTTAGTCAAAAGGGATCTCTACAGATTCACATGTCCAAACATAACGGTTACAAGCCTCACGTCTGCTCGTGTTGTTCTCTGTCGTTTTCGCAAAGAGGAAACCTGATAACTCATGTCAACAAAGTGCATAGAATTCCAAAGGAAGGAGAGGAAATATATAAGTGTGTTAAGTGTCCTTgttcttttaaaaagttagCCAGTTTGAATTGTCACGTCACTCGTTTTCATATAGGAGTTaagaacaacaataaattaaacgctGACCCTAACAGTTCGGATGTTGATGCTTTACTAAACCAAATCGCGGAATTACGAAGCAATTTACCCACGGGATCAGACATGGATATACTACAAACGGCGATTAGAATCAGTGGTTTGCCTGTGTCGATGAAACCAACGGATGAAACGGATGACCGCCTCGGCAAGGACAATTTGGTGGCGGATAACTTGTACACAGAAAATTCCATAGAGACCAATGATTCTGCCTCGGAAATTCGGATAGTTACAATAGCAGACAAAAGTGACGATGGTAACGTGAAGCACTTCACAGTTCGGCAGAGGCGAGAGGGCAACGTGAGGTGGCACCAGTGCAACGTATgtcaaaaagaattcaaaaaaccATCGGATTTAATCCGACACATTAGGATTCACACTAGGGAGAAACCTTTCAAGTGTAACCAGTGCTTCAGAacgttttctattaaatcaaCGTTAAAATCACACACAAGAACGCACCAAAGTTCCAAGTTTCACGAGTGCAAAACTTGCGGGAAAAAGGTTTCCTCCTCGagaagtttgaaaattcatcaGAGGTCACACTTCGGAATCAAACCTTTCACGTGTAACTTGTGTATGAAATCGTTCACCACCTCCGGTCAGTTGAAAACGCACTGTTCGACCAATTTGCACAAAACGAAAATCGACAATCCCACGAACGAGTTAGAATCCGTTAATAACAATTACTTTTTCGAAGAGCCATTCCTAATAGTCGGTGGAGAGTTCCGGCAGCAGTTGTCCCGAAAGGAAAAACTTATAACCAGAAGTCAGAATGCAAGCAGTGCAGAACGACCGTACGAGTGCGAGTATTGCCAGCTGAAATTCAGGAAATCGAGTCATTTGAAACAGCACAAACTGCAACACACAGGAGAAAAGCCGTTTTCCTGTGTGGTCTGCCACAAAAATTTCACGACGAACGGAGTATTGAAAATGCATTTGAAAACGCATCTGGGACAGAAGGATTACGGCTGCGACAGGTGCACAAGTAAATTCTCGACGAAGGGAAGTCTAAAGAGGCACATTCAAACATTCCACAGCGAGGACAGGCCTTACATGTGTCCGTACTGTCAGAAACGTTTCAAAACTTCAGTAAACTGTagaaaacacattaaaatccATAGGTACGACAATAATCAACATTTTCTTCggttaaaattaaacgagaTTTATTCGGACACAAACAAAGTGCTCACCGAACAAAACGACATGACCAACCCCGCGGATGTTGAGGAGAGCAAAATCGACAAGAACGAATCCGCGGAAACCATAAACCAAACGTTGTTGGCCGATTCGACAGGTACAATAACGCTGTCGGCCTTAAACCAGGAAACGCTTACACAGGAGAGCATCAGAGAACTCGAGCAAACGCTCAACCAGCAGTTGTTCGGTACCGAACAGGGCCCTGAGTACACGGTGCAAATGATTTCTTCCGTGGAAAACGACAAGGAGAACGACTTCATAGATCCGTCACTGCTGACCAAACCACTGATTTTGAACGTGAACGAAAACATCAGACAGCCTTCCATAGTTCATGCGGTTTTCTCTCAAACTGAAGAACTGCAAACGGTGTCGAACATGTCGGAGATATTGCCGGACACGAAGGATGGAGAGTCGGACTACGCGGATATCAACGATAGCAACGATAAGGAAAACGAGGAGCGCTCTTTTtgtcagaaagaaaataagaatttcacCTGCGACGTGTGCAATAAGGTTTTTCTCTCGGTGCAACACCTGAAGGCGCACAGCAAAACTCACGTCGGAAAGAAAGAGTACCAATGCGAACTTTGTGGATGGAGTACACTGACAAGGTCGTCTCTTCGACGCCACGCCAACATTCACAgcgaaatgaagaaatattcGTGCACGGAATGCCCTGCCAAATTCCGTTTGGAAGTTCACCTGAGAAAACACCAGAAGCTACACGAGGTGGGTGCTGAGGACGCAAATAATCGAGTAAACAGACGGAACAAAGGTCCTTTCCGGGAGTTCAGCGACGCAGAAACGGAGCTGTTGGCTGCCCAAGACGTCAGGCATGGGGCTAGCGTTTCCGAGAAAATTCTAATCGAATCCGCCGCCGAAAAGTTGAGAatcgaagagaagaaaaaggctGTTGAGAACACCGAGAAAGACACCGGCAGGAGCAATTTCGGCAATGATTGTAAATACTGCcagaaaagttttaagaaaCCGTCAGATTTGATCAGACACATTCGAGTACACACGGGAGAACGACCTTTCCAATGTACTCAGTGTAACAAGTGTTTTCGGGTCAAGTCAACTCTTTCGTCGCACCTGCGGACTCATTATGGGGTGAAACCAGTGTCTTGTCATATATGCCAGTCCATGTTCGCGGCCAAGAGCTCGCTCAAGGTGCACATGAGATTGCACACGGGAGTGAAACCTTTCGAGTGTCCCATTTGCGGGCAAAGGTTCCGAACTTCGGGTCACAGGAAGAATCATCTCTTGTCTCATGCGAAGAACAAGCCGAAAACGTGGAAGAAGCAACAACTACAGATGTTAAACAAGATAGCCGTCGCGTTGGTTGTGAACTTGTCAGAAGATGGGGAAATGGACAAGAACGATGGGATCAAGGTGGACGACGGTAACGAGTTACAACAGGCGTTCGACAGTACCGAGATGGAAACCATTCAAAACGATACCGAAAATGAAGCGCTTCTACTCCAGTTGAACGATCAAAATAATATAGTTCAGCTGTTGTCGGCGGAACAGAACGAGAACGATGTGGTTCCTGCGGTTCAAGAAGACAACCAGCAATCGATGCAGTTTCAAATATACACGTCCGACGGTCAGGTGTACATCACGCACCCGAACTCGGACTTAATCATTTGTTCGGACGAAAGTGTGGGGAGtaacaatgagaaaaaatccATCGTGAACGATTGCAAAACGATCGCGACCGATGACAAACTCGACAGCGTGCTAGAGAGACCCGGAAACATGTGCAATTACTGCGACAAAACCTTTTCAAAGAAGAGTCTGCTGGAGAGACATTTGAGAGTTCACACGGGAGAAAGACCATTCTCATGCGACCTCTGCGGAAAGCGATTCACTCAGAGCAACGCTTTGAAAGCCCACCTGAAGGCCCACAAAGGTGAACGAGCCTTTTCCTGTCCGTATTGCGATTTCTCATGCGTCCAAAAGGGAAACTTGCGCATTCACATGAGCCGGACTCACCAGTTTGCGTATTTCATGGACGACGACAAGAAGAATAGTAAGCATGTTAGGAGCGAGAAACCAAGTAATTCGTCCAATCTGTTGACCGAGAGCTTGCTGAAAACTCCGTACAAATCGCCAACAGGAGTGAGAACATCTGAAATCGACCAGGTCATGGGCGAACTTTTTCCGTTGGTGACATAA
Protein Sequence: MDDISSPAKSETICNDIAPFIIELERRGAVCVKGDSVYELTKYDGSKVQVTGLVSQGGISFFPMPSELAPNDNIYVEQPLFINVPIENHQNEFVLDEDVVPVPLDDVVSKKDFQEIDSYEISDTITSDIGQFSEFENKVSILELVDAPELKEKSVPQSVIKKHSSSDITCEVTPSDLLSTFVIDGNENLGNVKADVNGDIINSEIVASLEEQVSESIGDSKLDAALNIISKPKELINQRTEETTNTKRGRPKKDREIQPPLRKGPFICEVCHTKVTTWSQFKSHKLMHSEENKPYTCKVCCLSFNVEKNLNLHMLLHNVGNLTCPECNKTFTRFASFKAHLPIHEEEENVFCSECGDEFTSNSQLEQHLQEHRNEWEKALSNEDAEPKNILSCKTCNRMFTNPITFECHKKDHQRLKNQLLALAPKRKRKRFRNASGGNYGNECSICKKTFPKPSQLVRHIRIHTGEKPFKCTTCSAAFSQKGSLQIHMSKHNGYKPHVCSCCSLSFSQRGNLITHVNKVHRIPKEGEEIYKCVKCPCSFKKLASLNCHVTRFHIGVKNNNKLNADPNSSDVDALLNQIAELRSNLPTGSDMDILQTAIRISGLPVSMKPTDETDDRLGKDNLVADNLYTENSIETNDSASEIRIVTIADKSDDGNVKHFTVRQRREGNVRWHQCNVCQKEFKKPSDLIRHIRIHTREKPFKCNQCFRTFSIKSTLKSHTRTHQSSKFHECKTCGKKVSSSRSLKIHQRSHFGIKPFTCNLCMKSFTTSGQLKTHCSTNLHKTKIDNPTNELESVNNNYFFEEPFLIVGGEFRQQLSRKEKLITRSQNASSAERPYECEYCQLKFRKSSHLKQHKLQHTGEKPFSCVVCHKNFTTNGVLKMHLKTHLGQKDYGCDRCTSKFSTKGSLKRHIQTFHSEDRPYMCPYCQKRFKTSVNCRKHIKIHRYDNNQHFLRLKLNEIYSDTNKVLTEQNDMTNPADVEESKIDKNESAETINQTLLADSTGTITLSALNQETLTQESIRELEQTLNQQLFGTEQGPEYTVQMISSVENDKENDFIDPSLLTKPLILNVNENIRQPSIVHAVFSQTEELQTVSNMSEILPDTKDGESDYADINDSNDKENEERSFCQKENKNFTCDVCNKVFLSVQHLKAHSKTHVGKKEYQCELCGWSTLTRSSLRRHANIHSEMKKYSCTECPAKFRLEVHLRKHQKLHEVGAEDANNRVNRRNKGPFREFSDAETELLAAQDVRHGASVSEKILIESAAEKLRIEEKKKAVENTEKDTGRSNFGNDCKYCQKSFKKPSDLIRHIRVHTGERPFQCTQCNKCFRVKSTLSSHLRTHYGVKPVSCHICQSMFAAKSSLKVHMRLHTGVKPFECPICGQRFRTSGHRKNHLLSHAKNKPKTWKKQQLQMLNKIAVALVVNLSEDGEMDKNDGIKVDDGNELQQAFDSTEMETIQNDTENEALLLQLNDQNNIVQLLSAEQNENDVVPAVQEDNQQSMQFQIYTSDGQVYITHPNSDLIICSDESVGSNNEKKSIVNDCKTIATDDKLDSVLERPGNMCNYCDKTFSKKSLLERHLRVHTGERPFSCDLCGKRFTQSNALKAHLKAHKGERAFSCPYCDFSCVQKGNLRIHMSRTHQFAYFMDDDKKNSKHVRSEKPSNSSNLLTESLLKTPYKSPTGVRTSEIDQVMGELFPLVT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -