Basic Information

Insect: Polyplax serrata
Gene Symbol: -
Assembly: GCA_037055365.1
Location: JAWJWE010000036.1:14331427-14336419[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 30 4.8e-06 0.00028 20.6 2.3 3 23 40 60 39 60 0.98

2 30 9.7e-06 0.00057 19.7 0.3 2 23 82 103 81 103 0.96

3 30 0.00046 0.027 14.4 4.1 3 23 112 132 110 132 0.96

4 30 0.00076 0.044 13.7 7.8 1 23 138 161 138 161 0.97

5 30 4.8e-06 0.00028 20.6 2.3 1 23 167 189 167 189 0.98

6 30 4.9e-05 0.0028 17.5 2.5 1 23 195 217 195 218 0.95

7 30 0.00039 0.023 14.6 2.0 1 23 228 250 228 250 0.98

8 30 6.2e-06 0.00036 20.3 0.1 1 23 257 279 257 279 0.98

9 30 2.5e-05 0.0015 18.4 1.4 2 23 286 307 285 307 0.96

10 30 3e-06 0.00017 21.3 0.2 1 23 313 335 313 335 0.99

11 30 1.4e-06 8e-05 22.3 0.5 2 23 341 363 340 363 0.97

12 30 0.0055 0.32 11.0 0.3 1 23 485 507 485 507 0.98

13 30 0.25 15 5.8 4.6 2 23 554 576 554 576 0.89

14 30 0.022 1.3 9.1 0.7 1 23 582 604 582 604 0.98

15 30 0.097 5.6 7.1 6.9 1 23 610 633 610 633 0.97

16 30 9.3e-05 0.0054 16.6 0.2 3 23 641 661 639 661 0.96

17 30 0.00029 0.017 15.0 1.3 1 23 667 690 667 690 0.96

18 30 0.00012 0.0067 16.3 1.0 1 23 700 722 700 722 0.96

19 30 1.1e-05 0.00064 19.5 0.5 1 23 728 750 728 750 0.96

20 30 3.1e-05 0.0018 18.1 0.1 2 23 757 778 756 778 0.96

21 30 1.8e-07 1e-05 25.1 2.3 1 23 784 806 784 806 0.99

22 30 0.4 23 5.1 0.2 1 14 812 825 812 829 0.90

23 30 0.033 1.9 8.6 1.4 3 23 882 903 880 903 0.95

24 30 2.8e-05 0.0016 18.2 1.8 1 23 907 929 907 929 0.98

25 30 0.0059 0.35 10.9 0.2 1 23 935 957 935 957 0.97

26 30 0.00011 0.0065 16.3 0.6 3 23 965 985 963 985 0.96

27 30 0.0084 0.49 10.4 2.9 1 23 991 1014 991 1014 0.92

28 30 3.8e-05 0.0022 17.8 2.2 1 23 1024 1046 1024 1046 0.98

29 30 1e-05 0.00058 19.6 2.0 1 23 1052 1074 1052 1074 0.98

30 30 0.024 1.4 9.0 0.8 1 23 1080 1101 1080 1101 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	30	4.8e-06	0.00028	20.6	2.3	3	23	40	60	39	60	0.98
2	30	9.7e-06	0.00057	19.7	0.3	2	23	82	103	81	103	0.96
3	30	0.00046	0.027	14.4	4.1	3	23	112	132	110	132	0.96
4	30	0.00076	0.044	13.7	7.8	1	23	138	161	138	161	0.97
5	30	4.8e-06	0.00028	20.6	2.3	1	23	167	189	167	189	0.98
6	30	4.9e-05	0.0028	17.5	2.5	1	23	195	217	195	218	0.95
7	30	0.00039	0.023	14.6	2.0	1	23	228	250	228	250	0.98
8	30	6.2e-06	0.00036	20.3	0.1	1	23	257	279	257	279	0.98
9	30	2.5e-05	0.0015	18.4	1.4	2	23	286	307	285	307	0.96
10	30	3e-06	0.00017	21.3	0.2	1	23	313	335	313	335	0.99
11	30	1.4e-06	8e-05	22.3	0.5	2	23	341	363	340	363	0.97
12	30	0.0055	0.32	11.0	0.3	1	23	485	507	485	507	0.98
13	30	0.25	15	5.8	4.6	2	23	554	576	554	576	0.89
14	30	0.022	1.3	9.1	0.7	1	23	582	604	582	604	0.98
15	30	0.097	5.6	7.1	6.9	1	23	610	633	610	633	0.97
16	30	9.3e-05	0.0054	16.6	0.2	3	23	641	661	639	661	0.96
17	30	0.00029	0.017	15.0	1.3	1	23	667	690	667	690	0.96
18	30	0.00012	0.0067	16.3	1.0	1	23	700	722	700	722	0.96
19	30	1.1e-05	0.00064	19.5	0.5	1	23	728	750	728	750	0.96
20	30	3.1e-05	0.0018	18.1	0.1	2	23	757	778	756	778	0.96
21	30	1.8e-07	1e-05	25.1	2.3	1	23	784	806	784	806	0.99
22	30	0.4	23	5.1	0.2	1	14	812	825	812	829	0.90
23	30	0.033	1.9	8.6	1.4	3	23	882	903	880	903	0.95
24	30	2.8e-05	0.0016	18.2	1.8	1	23	907	929	907	929	0.98
25	30	0.0059	0.35	10.9	0.2	1	23	935	957	935	957	0.97
26	30	0.00011	0.0065	16.3	0.6	3	23	965	985	963	985	0.96
27	30	0.0084	0.49	10.4	2.9	1	23	991	1014	991	1014	0.92
28	30	3.8e-05	0.0022	17.8	2.2	1	23	1024	1046	1024	1046	0.98
29	30	1e-05	0.00058	19.6	2.0	1	23	1052	1074	1052	1074	0.98
30	30	0.024	1.4	9.0	0.8	1	23	1080	1101	1080	1101	0.97

Sequence Information

Coding Sequence: ATGAACAAGGAAAACGAGCCCAAGGTGGTGATGTGCAAAACTTGTGGCGAAACAATATCAGAAGAAAGACTCGAGGAGCACACCTATCTCGCTCACCCAGAGGCATCAATCCAGTTCTGCACCGTTTGCAACAAGGTGTTTTGCAGTCGTGATGATCTTCTCATACATATGAGGTCTCACCCAAAACCAccgaagttaaaaaaaggtcaaaaatCATCTGGGGAATCAAGTCAAACGGAATGGCCGTGCTCCCAATGCGACAAAATCTACCCGACGAATCAGCAACTCAAGTCTCATATGAAAGTTCACAAACACGAGCCCTACTCTTTGGATTGCAAAATCTGTCATAAAGTGTTTAAGACGACACATTACGCGCGCGAACATATGAAGGTCCACACAGGTATACGTCCGTTTAAGTGTCACTTGTGCAACAGGAGTTTCATGCAGAAGCAGCATTTAATTAGTCACAAGAAAAGGCAACATTTCAAAGAGCACGCGTTCAAATGTGAGAAATGCGACAAGGGTTTCCATTCGAAAACAGAACTGCAGGTTCACATGAATTGGCACACAGGAGAAAGACCCCACATGTGTGACGTTTGCGGTAAATCGTATCCATCGAAATCGAACATGATGGGACACAAACGAATCCATCACCCCAGGCCTGACGGAACTCTAAAACGGTACCCTTGCACGACATGTTTAAGGCAGTTCATGACGAAGCGGTCCCTGTTGAACCACATGCGGCAGCACACGGGAGAGGCAGGTCACTATGTTTGTGATATTTGTGGAAAGGCGTTATCTAGCAGACAGTCGTTAAAAGCTCATCGGATGATTCACACGGGCGAGAAACCGATTTCGTGCTCATTGTGCTTCAAGGCGTTCAGCACAAACAAATATCTAAGAACACATATGAAAGCTCACGGGAATGAGAAGCCATTTAAGTGCGGGGATTGTGGTTTGGGATTTTCTCAAAGATCAGTTTTAATAACACATCAAAGAGTCCACGCGACAGATGGGATAAAGTGCGAAGAGTGCGACCTAACCTTTTCGAACAATAACCTCCTTCGAACTCACATGCAAACTGTGCATAATGAATTGGTACAACAGATGAGGCCATTGCAACCTCATCAACAAACATCACAGCAACAGCAATCAACCGAGCAGATCATCTTGTCAGAACAACCCATCCTTCAGCAGCAAATTGTCGTTCAACAGGGGGGGCAAACAGAACAGGCCACTATGATTGTGGCGCATCAGCGAATTGTGGCTCAACCCATGCAGCAAATGCTCATCACTCACCACCGCATTCCACAAGAGCAAATCCAGTCTTCCGTGCTGGTCACCCAGGACGGTACCGATGGTGAATCGCCCTCCATTTTAGTTTCCCATCAGAGGATTGACACTGAGCAAGAGCCTACTGTGATGGCGGCGGCCCAGTCAGATCAGCCACGATATCAATGCGATTTCTGCCGAATGGAATTCGTTACGAAAGCCATTTTGAAAGCTCATCAGGCCAGCCATAACTACACATACCCTATGTTTACCATgttcaacgCTCCGGGCTCGACGGTTGACGTTTATGGTAGAGTTTTAAGAAATGACGAGaccgttgaaaataaaattggccATAAAAAACCGACGAGAAACCGCACTGTCAGAACATGTAAAGTGTGCAAGCGACATTTCGCGTCAAGGGCCGAATACGAGAGCCATTGTAAATCAGAACACGGAATCGAAAAACCATACACCTGTGAAATATGCAATGGGCAATTCAAGAGTCCCCACATACTCTCCGGACATATGAAACTTCACACGAATAAGAGAGACCATACTTGTGATATGTGCGATTTTGCTTGCTATTCCAGACATAACTTGGATGTTCACAAGAGAAGAAACCACTCGAAGGAATTTCTTGTTAATTGTGAAATCTGTGGGAAGGGTTTCTTCAGTCGGGTGGAGTTGAATGTTCACAAAAACTCGCACACGGGTAGCCGACCCTACCAATGCGAACTCTGCGGCAAAGACTATATGTCCAAATCTCATCTTGGCTCTCACAAAAAGTGGGTGCACCCCGAACTCTTCAGCAGCGATCGTTACCACAAGTGTCCAACTTGCTCGAAAACGTTCCCATTTGCCAAGCTTTTGGCAAAACACCTGGAAGGACACGCGGGAACTAGAAAATACCTGTGTGATTTTTGTGGGAAAGCCGTCACTAGTCAGGAGTCGCTGAAAATACACAGAAGAACACACACTGGAGAGAAACCCATAGTTTGCGATATTTGCGGCAAGGCGTTTGGTGGAAGGTACTACTTGAGGGTGCACAGGAGGCTGCACACCGGTGAGAAGCCGTACACATGCACGACGTGCGGAAAATCGTTCACCCAGAGGTCCACCCTGTCATTGCATTTGCGATCCCACACAAACAGCAAATCCTACTCATGCGAAGAGTGCTCTTTGGCATTTGCAACGAAATACTTgaacaATACCTTTGGTACTTTGAAAAGTTCCTCGGAAGTGTCGCAAACAACGGCTGAcgagaaattgaagaaaaagaaagtcaaaagaGTGACGAAAAAggctttgaaaattttaaagggaAAATACATCCCAGGGACAAGGCGAAACAAAAAACGTCCAGACATTTGCGATATTTGCCGGCTGACCATGACACACAAAGACGAACTGATCCATCACCTCCTAAAAATTCATAAGGTTGAGTATAAGTGTAAGCAGTGCGGAAAATTGTACAAGAGCAGAAAAAACCTAGCCAGCCACGAGAAAATACACACTGCTCCAAAGGAGTTCATTTGCGAGATTTGCGGCTACGCCTCCTACAATCGTGGCACTGTGGCTACACACCGGAAACGCCATACAAAAGCTTACACGGACTTTTGCGACGTCTGCAACAAGGGTTTTTACACGAGGTACCAGTTGGAAGAACACAGGAACCTTCACACAGGCGAACGTCCTTTTAAATGTGAGTTTTGCGACAAAGGATTCATTTGCAAAAGTACACTGGAGAAGCACAAAATCGCAACACACTCAAAATTGTTGGACAACGTGAAGAATTTTCCTTGCACCATATGCACCAAAACATTCCTATTTAAAAAGAACCTGGTGCGACACCTGAGGACCCACACTGGAGAGAAACCGTTTGTGTGCAACTACTGTGGGAAGGGCTTGACCAGTTCGCATTCTTTAATGATACACAAGAGAACTCATACTGGCGAGAAGCTTTTCGTGTGTGATTTATGTGGTAAAAGTGGACATGTCAGATATCTGAAAGATCACATGGGAACGCACAATCAATCTTTGATGAAGACAAGAAGTGGTAAACAACAACTGCATCAGCCGCAAACGATACAAATGGATCATGTGGCCGCAGCTCTGACGACTGTCACCGACAGCCAATCTCACAATGAGCCAATCAGTCAAATTCCTATCATGGAACCTGCCATTGTGTCCATGTGCCATCAAATGCCTAGAAATCAGCATCAAAGCATCACAGTTGAAATGTTTGATCAGCAGGTGAATTGGCCTCGTAGGACGGCAACGAACATTCCGGATAAGAGGGCCTTAACTCAGTTCAGTGACTCGACTAGAAGACAACAAACCACTGTGACAGCTCCAATACATGGTATTGATTTTTGGCAGGGACCAGAAAATGCTTAA
Protein Sequence: MNKENEPKVVMCKTCGETISEERLEEHTYLAHPEASIQFCTVCNKVFCSRDDLLIHMRSHPKPPKLKKGQKSSGESSQTEWPCSQCDKIYPTNQQLKSHMKVHKHEPYSLDCKICHKVFKTTHYAREHMKVHTGIRPFKCHLCNRSFMQKQHLISHKKRQHFKEHAFKCEKCDKGFHSKTELQVHMNWHTGERPHMCDVCGKSYPSKSNMMGHKRIHHPRPDGTLKRYPCTTCLRQFMTKRSLLNHMRQHTGEAGHYVCDICGKALSSRQSLKAHRMIHTGEKPISCSLCFKAFSTNKYLRTHMKAHGNEKPFKCGDCGLGFSQRSVLITHQRVHATDGIKCEECDLTFSNNNLLRTHMQTVHNELVQQMRPLQPHQQTSQQQQSTEQIILSEQPILQQQIVVQQGGQTEQATMIVAHQRIVAQPMQQMLITHHRIPQEQIQSSVLVTQDGTDGESPSILVSHQRIDTEQEPTVMAAAQSDQPRYQCDFCRMEFVTKAILKAHQASHNYTYPMFTMFNAPGSTVDVYGRVLRNDETVENKIGHKKPTRNRTVRTCKVCKRHFASRAEYESHCKSEHGIEKPYTCEICNGQFKSPHILSGHMKLHTNKRDHTCDMCDFACYSRHNLDVHKRRNHSKEFLVNCEICGKGFFSRVELNVHKNSHTGSRPYQCELCGKDYMSKSHLGSHKKWVHPELFSSDRYHKCPTCSKTFPFAKLLAKHLEGHAGTRKYLCDFCGKAVTSQESLKIHRRTHTGEKPIVCDICGKAFGGRYYLRVHRRLHTGEKPYTCTTCGKSFTQRSTLSLHLRSHTNSKSYSCEECSLAFATKYLNNTFGTLKSSSEVSQTTADEKLKKKKVKRVTKKALKILKGKYIPGTRRNKKRPDICDICRLTMTHKDELIHHLLKIHKVEYKCKQCGKLYKSRKNLASHEKIHTAPKEFICEICGYASYNRGTVATHRKRHTKAYTDFCDVCNKGFYTRYQLEEHRNLHTGERPFKCEFCDKGFICKSTLEKHKIATHSKLLDNVKNFPCTICTKTFLFKKNLVRHLRTHTGEKPFVCNYCGKGLTSSHSLMIHKRTHTGEKLFVCDLCGKSGHVRYLKDHMGTHNQSLMKTRSGKQQLHQPQTIQMDHVAAALTTVTDSQSHNEPISQIPIMEPAIVSMCHQMPRNQHQSITVEMFDQQVNWPRRTATNIPDKRALTQFSDSTRRQQTTVTAPIHGIDFWQGPENA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -