Pser008098.1
Basic Information
- Insect
- Polyplax serrata
- Gene Symbol
- bab1
- Assembly
- GCA_037055365.1
- Location
- JAWJWE010000037.1:12926304-12931751[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.2e-14 2.1e-11 42.8 0.1 2 45 377 420 376 420 0.93
Sequence Information
- Coding Sequence
- ATGGGAAGCTCACAACAGTACTGTCTCAGGTGGAACAACCATCGTTCCAACCTATTGACAGTTTTCGATCAGCTGCTGCAGAACGAGGCATTCACGGACGTGACCTTGGCCTGCGACGGCGGAACCTCCGTCAAATGCCACAAAATGGTGCTGGCCGCGTGCAGCCCTTACTTTCAGTGCCTGTTCACCGAGTTGCCGTGTCGACATCCTGTGGTCGTGCTAAAGGACGTCAAGTACAACGACATGAAAGCCATATTAGAATATATGTACAGGGGTGAGGTGAATGTAGCCCACGACCAGCTGGGCGCTCTGCTCAAGGTCGCTGAGGCCCTCAAAGTGAAGGGCCTAGTCGAGGAGAACGGTCGGGAAGCAAACAGTTCAAACAGTTTGCCTTTGTCAACAACGAAGACCGAATCCGACAGGAATGATGTAAATTCACCCCCACGGATAGGCACGTCCAGCACGTCAATATCGAGCGTGCCACACTCGTCGGTGAGTCCTCCACATTCGACCCACGGTAACGGCGAGAACTGTCTGTCAAATTCCTACGGAAAAAGTCCCTATATGTATGGTAAGAGTCCAGTGATGGAAAGAAGCAGCAGAATGAACTTGCCCATGTGGGCTGTGCCTCTGCCACACCACCCATCTCCTGTGCCACCGCCGAGTCACCCGCATGCGGCTGCAACAGCCGCAGCAGCGATGCTTTCGTCCTGTTACGAAGCTGCCAGTTCGGACATGTCGCCATTGAAACGAAAGAAACTGCAGAGTTTGCTCATGTCGAGAGATACACCGATACTCAGAACGGTACTTGGACAAGGACAAGTGGACTCGTCACAACCAGTGCCCTTGGTTTGTCACCCGGACACCCAAGAAAGGATCCACTCAAATGGATCGGCTCAGGACAACGAACGGaaTGTCAAAGCAGAACCATCGGAAGACGCTCCCAGCCCATACACAGATATTTCTATCATGGACGACGATACCAGCCCAAGCGAAAAGaataataaatcgGCGCCGACGTCATCACCACAAACGGCCTTCCCATCGGACATGCGAAACGTCACTTCGGGAATCGCCACTTATGTGCCTCAGCAAAAACCCGAGTGGAAACGATACAAGCAGTACACCAGGAACGATATTTTGAGTGCAATCGAAGCTGTCAGGGCTGGCATGAGTGCGTTGCAGGCTGCAAGAAAGTACGGCGTGCCCTCCCGCACACTCTACGACAAAGTTAAGAAGCTGGGTATAACTACAAGCAGACCCTTCAAGAGAGGGTCTAATGGTGGCAACTCCAATTCGTTCCCCTATAACATGAGTCCAGGCCTGGGTCATGTTTTCGGAGGCGTCTCTGAGAATGAAGATCCTTTGCCACCACATAGCGGGGGAGCTCTTCTCGAACCCATGTTTTTGCAGCATGCTTTGGAAAGAAGTAAGGGTGATTTTGCCGAGCGAGAGGCTCTGATGGCGCTGGCATCGGCCCATGCTCAAGCCTCAGCTGGGTCTGGGTCGGGATCGAGACATTCTGGTAGCAACAACAACTCTTCTCCTGAAAACAACGGCCGTTCACCGAGTCCTAACATGCTCTCAATGAAATACATGCGACACGGGAGCATGACGCCTTCTCCGAACACAGATGACAGGATGGACGACGAAGATCAAGTAGAAGATTTGTCCATTACAAGAAAGGAAGTACATCAGACACAGCCCCCACAACAGACTACAGGCAGTGTCATAGTACCGCCGATGAGTCTACTAGcgaagaaagcagaagaattGGCGGAACTGTCGAGAGAAAGAGACTTGTCGAGAATGCGAGAGCGGGAGGAGCGGGAGCGGGAGCGAGAGAGGGAACGAGACGAAGTGGACAGGGAAAGAGACAGAGTCAGGGAGATGAAGAgggagacagaaagagaaatggagagagacagacaagAACGGGAGAGACAgacggaaatggaaaatcattcGCCGGACGATTCGAGGAGGGACTAA
- Protein Sequence
- MGSSQQYCLRWNNHRSNLLTVFDQLLQNEAFTDVTLACDGGTSVKCHKMVLAACSPYFQCLFTELPCRHPVVVLKDVKYNDMKAILEYMYRGEVNVAHDQLGALLKVAEALKVKGLVEENGREANSSNSLPLSTTKTESDRNDVNSPPRIGTSSTSISSVPHSSVSPPHSTHGNGENCLSNSYGKSPYMYGKSPVMERSSRMNLPMWAVPLPHHPSPVPPPSHPHAAATAAAAMLSSCYEAASSDMSPLKRKKLQSLLMSRDTPILRTVLGQGQVDSSQPVPLVCHPDTQERIHSNGSAQDNERNVKAEPSEDAPSPYTDISIMDDDTSPSEKNNKSAPTSSPQTAFPSDMRNVTSGIATYVPQQKPEWKRYKQYTRNDILSAIEAVRAGMSALQAARKYGVPSRTLYDKVKKLGITTSRPFKRGSNGGNSNSFPYNMSPGLGHVFGGVSENEDPLPPHSGGALLEPMFLQHALERSKGDFAEREALMALASAHAQASAGSGSGSRHSGSNNNSSPENNGRSPSPNMLSMKYMRHGSMTPSPNTDDRMDDEDQVEDLSITRKEVHQTQPPQQTTGSVIVPPMSLLAKKAEELAELSRERDLSRMREREERERERERERDEVDRERDRVREMKRETEREMERDRQERERQTEMENHSPDDSRRD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01308777;
- 90% Identity
- iTF_00362617;
- 80% Identity
- iTF_01251166;