Pser004912.1
Basic Information
- Insect
- Polyplax serrata
- Gene Symbol
- Mblk-1
- Assembly
- GCA_037055365.1
- Location
- JAWJWE010000006.1:2275518-2280357[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 4.2e-18 7.2e-15 53.9 0.0 1 44 225 269 225 270 0.94 2 2 6.4e-19 1.1e-15 56.5 0.0 1 43 617 660 617 662 0.95
Sequence Information
- Coding Sequence
- ATGGGTCGAAGAAAATGGCGTCTGTATCAGGAGAAAGTTCTCAAAAGCTGGTGTCCATCgatagaaagagaaatagaagTCAAAGACTGGGACCCAACAGACGATAAATGTTCTTTCTGCGATCTTGAGCCGTCCGGAAAACTAACGGACGACGAACCCGGCAGCCCATTTCGATCGGAGTGTTTCAATTCAACAGTtcataataacaataacaacaacaatacaaacaaaaatacaaacaacaaTAACCACATAGACCTACTGGAGGTGGACGAAAGCGACACAAATTCTTTAAGCTCAACTGAAGACGCGATAACGACGATGAACGCATTGGATTCGGTTACGTCAATGGCCGCCATTGCCGCCCTGACAGGCCCTGGGGGAGCCCCAAATCCCCTGCTGTACCCTCCAGGGGTATTCCCTCGATGGTACCTTCCGCAACCCTCTAGAGCCTTACTAGAAGGAATGACGAAAACGGAACCACCGATGGTTGTAAGCTTGCCTGCATCTGCAGGTTCGGAAATGCCATTAGATTTAAGTGCCAAGTCTTCGAAGCCACCACAATCGACGGATGGTTTAGAAAACAACATAAGAGTACCAAATTTAACGGATAATAAACCCGTGATGAAggGACGACCTCGGATGAGTCCCATGTCCGGCAGAAGAACATACACCGAAGACGAACTCCAGGCGGCTTTGAGGGACATCCAGAGTGGAAAATTAGGAACGAGGCGAGCTGCTGTGATATATGGTATACCTAGGTCCACACTTAGAAATAAGGTGTACAAACTTGCcttagaaagagagagagacgctCACTTGTTGCTAGCGCCAATCCCTCGACCCTCGCCCCCGGAGGGCGCAGCGTCATCCCCAACATTGCCTGTCCACCCCGAGAGAGAAGACTCAAGCGCCGACGACGAGAAGGAACCGGAAATGGCTAAACCTCAACTGACAATGGAGGATCTAATGCGGTTGTCCGCCCTCGACGGAGCTACTCAGATTGAGGGTCTGACCGCGCTCCTCCACAATATTTCCCGGTTACACGCGGAGGGCATAAACGCCAGCGATTTGGCCGCAACCGGAAACTCCGTGCTCGCCTCCTACCTCGGCCAGTTGCTCAAATTAAAGGAAAACCTAAGTCCAAACTCTGAAAAGGAGAGACACTCGAGAAAAGAGGACGCTATTCTGAGTAGCAAGGACGGTGGCGAAGAGGATGAAGACGAGTGCAAAGGTACGAGAGACACTGTCGGCCATGACGACAAACTCAAGTACTCTCCCCAGGTATTGCCCCAACTCATGAGGCGGGTTATGGCCGAAGAGAAAATTCTAATGgatgaacaattaaaaagaaaaattgcaagTGAAAATGGCGCTGATGAAGATCCGTCGAATGTGATACTTAGAATTCCGTCCTTCAAGCCGAACGCCGGTTGTTCGAAACCGAACAACGGGGAGTCTGAACCGAGATTTTCGGCAAGTCCAGCCGGAGCGTCACAGGAGAACTCCAGGCAAAGCGTGATATCGCCCTCTCTCAATGGAGACAGCGATTCACCACCAATTGGGAAGACTGTGGGCATTTCCAGTCTGAGAGACGCAATCGCTAAAAGTATTAGTCAGAAGTTCCAGCAGGACGGGGTGTCCCCTCATGGCCTCGGTTCTCCAGTATTAGGGCCAGACCCTACGGACACACTCGCCAAACGCGGTAGCTATTCCCACGTGACGCTATCCCAGTCACACTCGGTCCTGAAGAACCACTTCGATAGGGGTCAGCAACGGCCTTCGAGTGCCCAGGCGAATGCCCAAGGGAAGGGAACCCGTCCGAAACGAGGTAAATACCGGAACTATGACAGAGATTCTCTGGTGGAGGCCGTCAGAGCCGTACAGAGAGGTGAAATGAGTGTTCATAGAGCGGGTAGCTACTACGGAGTTCCCCACTCGACTTTAGAGTATAAGGTGAAGGAGAGGCATTTGATGAGACCAAGAAAAAGGGAGCCCAAAGGAGAAGACAAGAACAAGCTGACGTCCAGTAGTGTGGCCTCTGCTGGTAGCAATCCCGTGTGCCTGGACAAGCCAAAGCCCCTGGCTCTCGCGCCCAAATTAGCCAACTCAAAACCCGCGTTTCCAAACCCGGCGACACTGCCCAATGGACTGAAAATTCCGCCAAGCATCTTCGAAACAGGCGTCTCACCACTAGCGGCTTATGCTGGTTCTCCGTTTCCTTTCTGGCCTCCTACACCTTTCCACGCGTTACCTCTGGACATAACCAGGGCCGGGTTTCCGACTACTCCAGAGCAACTATTTGCCCCTCAACTGATGAGGGGAGCAGGAAACGGAGGAGCagggggaggaggaggagtcGATCCACCACCAAGTCCGTCCACCCTGCCGGCGAGCACCAGGCGAATCGCAGAGAGCCTCTACGACGGCACGGGCAACAGCGGCAGTTTCTTGGACGGTATCATTAGGTCGAGTCTGGAAATGGGTCTGACAGCGTCGCAGAAGCCCGACAAAGACGCTGAAAAATCGGGCAAGAACATGGAGAACATGACGAATAAGGCGCTGCTCGACCAACTCTGTAGAAACTCTCGCCTGACGCCTGTGCTCAGAGAGAGCAACTCGGATGACGACGGTGGACAGAGGAACGTGGCCTTCGACCTGTCGCGGTCATCGGACGACGACTACGACGACAGGAGACCTAGGAAGGGTTATGGGGGACGCCAGGGAGGCTTCGGACATCGGAGAGActcaaaaagaaggaaaagcgTAGACAACGACGGTGTCCTCGACGACTGTTCGAGAGTCAACGACGACAAAGGTGGCGAAACGAGAGGCTTCCATGAGACTCGATCGTATCGAAGTTCGATATCGGACGATCGATCAAAGCACTCGTCTTCAGACGTCGAGATGAACGGAGACAGGGAGGAGTTGAGTCCTGGGGATGTGCAAGAGGACGATGACATGGACAACATCTCGAACCATGCGAGCGACGAGGATGACGTCAAAGACTCttag
- Protein Sequence
- MGRRKWRLYQEKVLKSWCPSIEREIEVKDWDPTDDKCSFCDLEPSGKLTDDEPGSPFRSECFNSTVHNNNNNNNTNKNTNNNNHIDLLEVDESDTNSLSSTEDAITTMNALDSVTSMAAIAALTGPGGAPNPLLYPPGVFPRWYLPQPSRALLEGMTKTEPPMVVSLPASAGSEMPLDLSAKSSKPPQSTDGLENNIRVPNLTDNKPVMKGRPRMSPMSGRRTYTEDELQAALRDIQSGKLGTRRAAVIYGIPRSTLRNKVYKLALERERDAHLLLAPIPRPSPPEGAASSPTLPVHPEREDSSADDEKEPEMAKPQLTMEDLMRLSALDGATQIEGLTALLHNISRLHAEGINASDLAATGNSVLASYLGQLLKLKENLSPNSEKERHSRKEDAILSSKDGGEEDEDECKGTRDTVGHDDKLKYSPQVLPQLMRRVMAEEKILMDEQLKRKIASENGADEDPSNVILRIPSFKPNAGCSKPNNGESEPRFSASPAGASQENSRQSVISPSLNGDSDSPPIGKTVGISSLRDAIAKSISQKFQQDGVSPHGLGSPVLGPDPTDTLAKRGSYSHVTLSQSHSVLKNHFDRGQQRPSSAQANAQGKGTRPKRGKYRNYDRDSLVEAVRAVQRGEMSVHRAGSYYGVPHSTLEYKVKERHLMRPRKREPKGEDKNKLTSSSVASAGSNPVCLDKPKPLALAPKLANSKPAFPNPATLPNGLKIPPSIFETGVSPLAAYAGSPFPFWPPTPFHALPLDITRAGFPTTPEQLFAPQLMRGAGNGGAGGGGGVDPPPSPSTLPASTRRIAESLYDGTGNSGSFLDGIIRSSLEMGLTASQKPDKDAEKSGKNMENMTNKALLDQLCRNSRLTPVLRESNSDDDGGQRNVAFDLSRSSDDDYDDRRPRKGYGGRQGGFGHRRDSKRRKSVDNDGVLDDCSRVNDDKGGETRGFHETRSYRSSISDDRSKHSSSDVEMNGDREELSPGDVQEDDDMDNISNHASDEDDVKDS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -