Pvan000118.1
Basic Information
- Insect
- Polypedilum vanderplanki
- Gene Symbol
- Zmiz1
- Assembly
- GCA_018290095.1
- Location
- CM031380.1:32407387-32501985[+]
Transcription Factor Domain
- TF Family
- zf-MIZ
- Domain
- zf-MIZ domain
- PFAM
- PF02891
- TF Group
- Zinc-Coordinating Group
- Description
- This domain has SUMO (small ubiquitin-like modifier) ligase activity and is involved in DNA repair and chromosome organisation [1][2].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 0.13 7.6e+02 -0.0 1.3 4 24 598 618 595 623 0.88 2 2 2.8e-24 1.7e-20 72.5 7.3 3 50 688 735 686 735 0.97
Sequence Information
- Coding Sequence
- ATGAATAACCACGGGACCTCAGTTGGAGCGACCCGAAACAGAGGTGGTATCCCAGCTGATAAAATAACGCCAAATGTCTATTATCATCACACTTTAGAGCCTCAAGCTACAACGATTGAGCAACAACATCAACAGTCAAGGCTACATTCGCAGCAACGACAAACAAATTGCAACAATTTTGGTACAAATAATTTACAACAGCAACAATATAGTAGTAATAACAATGAAAGTGATGTAACCGATGGTCTTGGTCTTTTGGTGACAGAAACGTCGTCAATCGGTAGTAATAAGAGTAAACGCAATACAGCAACTAGCAAATCCCGTAATAATAATAACGCAACGCCAATTCACATGAGCAGTAACAGTTCTTCATCAAGTAGTATTAATAGGACTAATAACAATCATCAGCAATTAGCGCCTGGTGCGTCAGTGTCATCTACGTCATTTAATCAGCATCCACAAAGTAGTAACATTAGTCAATACGCCAAtagtaacaacaacaacaacaacaattataGCAATCAGAGTAATcacttaaataataataattttaatatggtAGCTGCTGGTCAACAAGGCGCAATGGATGTTGGCTATAATTCACAGATGAACAATATGGGAATGCATTCACAAAATTCCTGGAATAATCAAATGAATCAAATGAATGGAAATGGTGTAGGTGGTGGTCAAGGAAATGGAAATGGTGCAAATATGAATGGTATGATGAATGGTGGAATGATGAATCAAATGCCAATGCATGGTAACGGCCAAGGCACAAATGGTAGTGCGGCTGGTATGCATGGTATGAATCAGATGAATCAAATGCCAATGGGCAATATAAATAATATGAATGGTGCCATAAACTATAATAATCCGCGACATCATCAATCTCAAATGAATCCAATGGCTCAAATGGCAAATATGGGAATGGGAACAGGAGGAGCAGTAGCTGGTGGACATCAGATGAACAATCAAATGAATGGTATGAATCAAATGAATCCAATGGCTAAAATGCAAGGCATGGCTAATGGATATGCACCAAGACGAATGTCACCTTATCCCAATCCACAAATGCATACTGCTCAAAAACGAGCAAATATGTATGGCATGAATACAAATAATCCAGCAGTACCAAGCAATGCAGGACCAGCAATGAGTCAATTTCCACAACATCAAGCTGGTGTGCCAATTCCTATGCAAAATCAATATGGCCGACCAGGTCAAAATCCTATGAATCCTTATAGAAATGGACCTTCAATGATGCCATCGAATAGACAAAATACTCCACCTTATAATAATTCGGCGGCACAACAGTATTATGGAAATGCAGGTGCTAATACAAGCTACCAAAATATGCAAGGATTTCATCAGCAAGATggcagaaatataaattatcaaCATAGTCCTGTACCAGGAAACCCAACACCACCTTTAACGCCTGCTTCATCAATGACTCCTTATATAAGTCCAAATCCTGATGTTAAACCAAATATTGTGCACAatGAAGAATTAAGATTAACTTTTCCTGTACGCGATGGCATAATTTTACCACCGTTCCGACTTGAACATAATCTAGCCGTCAGCAATCACGTGTTTCAACTGAAGCCAACAGTGTACAACACACTCATGTGTCGATCAGATCTCGAATTGCAACTTAAATGTTTCCATCACGAGGATCGACAAATGAACACAAATTGGCCTGCAAGTGTTCAAGTATCGGCCAATTCTACGCCCCTTGAGATTGATCGTGGTGAGAATAAAAACACTCATCGACCATTGTACTTGAAACAAGTCTGTCAACCAGGCCGCAATACTATTCAAATTACCGTCAGCACGTGCTGTtgtTCACATCTTTTTGTGTTACAACTTGTTCATCGACCATCAGTGAGGCATGTTCTTCACACGTTGCTTCGTCGAAATCTTTTACCTGCTGAACACGCTGTTGCCAAGATTAAGCGAAGTTTCGCTCAAGGACACATTCAGTCACCGCAAAGTAATGTTGTGAATCCAATTGGAGATAAAGATGGAGTCATTGATCAGCAACAGTCACTAAAAGTATTCCTTAAATGTCCCATCACTTGCAAACGAATAACATTGCCTGCACGCGGACACGACTGTAAACACATACAATGCTTTGATCTCGAGGCATATCTTCAAATGAATTGTGAACGTGGCAATTGGCGATGTCCGGTGTGCAATAAACCAGCTTTAACTGAAGGACTTGAGATTGATCAATACATGTGGGCAATTTTAAATACGCTAACGGCACAACAAGATACTGAAGAAGTAATGATTGATGCACAAGCCAATTGGAAAGCGATCAAACCAATGCTCATGAATGTAAATGGCATTAAACAAGAGCCAATAGATGGTGATAGCAAGCAATTTAGCAAAGTAATGTCACCAGGTTCAACTTCACTTCCTTCATGGGATAACATGCAGGCAATGTCACCTTACATGTCACCAGATATGAATTCAATTGCCAGTGGAAGCATGATGaatcaaaaTTATACCAACCAAAGAACACAGCAGCAATTCGATCCATTTGGAAATCCGATTAAGGATTCTTTAAGTGGCGATTTCAGCAGCAATAGCAGCAATAGTGGTAATAACAATCCACTTGCGCATTTGAATGAATCTGTGAATTCACTTGATCCACTTAATGCTATGGAAAAGACACTTAATGATCAGatgCCACATACTCCTCATACGCCTCATACACCGAATGGTGGTCATAATCCAATGACACCAAGTGGTCCGCCTAGTGTCCCAAGCATACACGACAACCAAAATACCAACAACAACTCCAACTCACCTCAGCACCAACAAAATATCCTCAGCTCAGCATCAAATATTATGAATTCACCTCAAAGTTTAATGAATTCACCACAAAATATGATGAACTCACCGCAAAATATGAACCAACAAAGCATGCAAcagaatttaatgaattcaataCCAAATCTCACCGATGTTTGTTCTGATTTGACTAATGCAGATCTTAATTTTGATCCTGCAGCTGTTATTGATGGTGAAGGCGGCAATGATTTAAATTTACTTCCGGATAATGTGAATGTCGATCCACTAGAATTATTGTCCTATTTAGATCCACCATTAGATCTCAATACACCGCCTAGCTCAGGTTCTAGTAATAACGCAAACAATGATGATTTCCTTGCTGTGctttttgattaa
- Protein Sequence
- MNNHGTSVGATRNRGGIPADKITPNVYYHHTLEPQATTIEQQHQQSRLHSQQRQTNCNNFGTNNLQQQQYSSNNNESDVTDGLGLLVTETSSIGSNKSKRNTATSKSRNNNNATPIHMSSNSSSSSSINRTNNNHQQLAPGASVSSTSFNQHPQSSNISQYANSNNNNNNNYSNQSNHLNNNNFNMVAAGQQGAMDVGYNSQMNNMGMHSQNSWNNQMNQMNGNGVGGGQGNGNGANMNGMMNGGMMNQMPMHGNGQGTNGSAAGMHGMNQMNQMPMGNINNMNGAINYNNPRHHQSQMNPMAQMANMGMGTGGAVAGGHQMNNQMNGMNQMNPMAKMQGMANGYAPRRMSPYPNPQMHTAQKRANMYGMNTNNPAVPSNAGPAMSQFPQHQAGVPIPMQNQYGRPGQNPMNPYRNGPSMMPSNRQNTPPYNNSAAQQYYGNAGANTSYQNMQGFHQQDGRNINYQHSPVPGNPTPPLTPASSMTPYISPNPDVKPNIVHNEELRLTFPVRDGIILPPFRLEHNLAVSNHVFQLKPTVYNTLMCRSDLELQLKCFHHEDRQMNTNWPASVQVSANSTPLEIDRGENKNTHRPLYLKQVCQPGRNTIQITVSTCCCSHLFVLQLVHRPSVRHVLHTLLRRNLLPAEHAVAKIKRSFAQGHIQSPQSNVVNPIGDKDGVIDQQQSLKVFLKCPITCKRITLPARGHDCKHIQCFDLEAYLQMNCERGNWRCPVCNKPALTEGLEIDQYMWAILNTLTAQQDTEEVMIDAQANWKAIKPMLMNVNGIKQEPIDGDSKQFSKVMSPGSTSLPSWDNMQAMSPYMSPDMNSIASGSMMNQNYTNQRTQQQFDPFGNPIKDSLSGDFSSNSSNSGNNNPLAHLNESVNSLDPLNAMEKTLNDQMPHTPHTPHTPNGGHNPMTPSGPPSVPSIHDNQNTNNNSNSPQHQQNILSSASNIMNSPQSLMNSPQNMMNSPQNMNQQSMQQNLMNSIPNLTDVCSDLTNADLNFDPAAVIDGEGGNDLNLLPDNVNVDPLELLSYLDPPLDLNTPPSSGSSNNANNDDFLAVLFD
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00321277;
- 90% Identity
- iTF_01249744;
- 80% Identity
- -