Pvan016115.1
Basic Information
- Insect
- Polypedilum vanderplanki
- Gene Symbol
- gatad1
- Assembly
- GCA_018290095.1
- Location
- CM031382.1:5313439-5314387[+]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 1.3e-08 3.7e-05 23.2 0.8 1 27 5 30 5 36 0.91 2 2 4.4 1.3e+04 -4.1 1.0 4 10 123 129 123 130 0.83
Sequence Information
- Coding Sequence
- atgaatcCTAAATGCATTCAATGTGATAAAACTGAATCAATTTTATGGCGCAAAAACTCGGAAAGTGCAGAAATTTGCAATGACTGTTTTGAAGcgaatttattgaaagttgaagaagtaaaagaaaaagagactGTCGCAAGTGAACAAAAAGACAGTGAAACACCACCAAAAGAACTTGAACCGTCCTCATCGATGTCATCAATTGCTCCAACAGAAGTCACAACTTCAtcaaaagtaagaaaaagcaCAAGATCAACGAGATTTAAGAGCAAAGCTATGACAAGACAAAAATCAACCAAGAGCACATCGAGAAGGTCAAATGTTTTCAAATCATCAAAACCATTTAAGACGCCGAACAATATTTGTGCTGAAACAAAGACTAAAACCAATCTTTTTCATGATggattttattatcaaatagGTGACATTGTGTCAGTAATGTCTAGAGgtAAAAAATACTACGCTCAAATCCGAGCACTAATGGTTGAttcattttgtgaaaaatcaGCAGTTTTAACTTGGTTAATTCCAACAACATCAAGTCCAGATCCAAATGAAGGTTTTGATCCAGCGACATACTTAATTGGTCTAGAAGAAGATTTACCTCGTAGAATTGCAAACATAATGGAATTTGTAATGCATGCACCAAGTAATTATTATTACAACAGAAATGAACCATACGAAAAACCAGAAATTCTTGAAGATGGACTTTACAgcgagaaaaataaaaaaggatttGTTTGGACAAATATGagttaa
- Protein Sequence
- MNPKCIQCDKTESILWRKNSESAEICNDCFEANLLKVEEVKEKETVASEQKDSETPPKELEPSSSMSSIAPTEVTTSSKVRKSTRSTRFKSKAMTRQKSTKSTSRRSNVFKSSKPFKTPNNICAETKTKTNLFHDGFYYQIGDIVSVMSRGKKYYAQIRALMVDSFCEKSAVLTWLIPTTSSPDPNEGFDPATYLIGLEEDLPRRIANIMEFVMHAPSNYYYNRNEPYEKPEILEDGLYSEKNKKGFVWTNMS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01249728;
- 90% Identity
- iTF_01249728;
- 80% Identity
- -