Pvan009893.1
Basic Information
- Insect
- Polypedilum vanderplanki
- Gene Symbol
- Gata4
- Assembly
- GCA_018290095.1
- Location
- CM031379.1:9507646-9517134[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 2.2e-13 6.6e-10 38.4 3.0 1 35 430 464 430 465 0.95 2 2 2.3e-18 6.7e-15 54.4 7.0 1 35 490 523 490 524 0.97
Sequence Information
- Coding Sequence
- ATGGTGAATGCAAAATCAGAATCGATAAAGATGGACACACAACAGTCGGAAATTGTTGAGCAAAAGGTAGAAGCAGTGACTGTCGAACGAGTAATGATTGCTGAAGTAAATAATGGAAACGAAGCAGTGAAAGttgagaaaattgtaaaagatcCTGTAACAGTCATAGCTGTGCCAACATCAACAGAAGTTTCATCATCAGTAGCAACATCAGCAAGTCAAGTTCAAGAATCAATTGTGACTAGTGGTGTTCAAACAATTCCACCAACAACTGTCATTGCTACTCGTCAACGTATGATAACAACACAAGGACATATTCGTGAAATTTCTGTCACACAAGCACAAGACGTTGCCGAGCAATATGAGCAATATCAAATTACAGCATCTGGTGATGATCAAAATGTTTACACTTATGAACAATCGCCTGCTGGAATTATAACAATTAGTCAACCAGAAAATTTGCAAACTACAGGAATTCTTAAGCgtgatattttaattgaaaaagaacaTTCTGGTGTTAGTGGTCCAACAATAAATGTGGTAAGTGCTGAGCCACAGACAGTTTATgtagaattgaaaaataatggtGAAGAACAAGCGAGATATTTGTCAAATGCAACAATTCGATATGAAGCACCTGATCGTTATCATAGATTTCCTTATCATGGTCTACCTCCGCCACCACCACATAATTCACACTTGCAACATCAAAGAGAAATGGCATTAAAAGCTGAAGGATCACAACATCCACCACCACCTCaagaattacaaatttatgaaGCGGAACATGCAGCACATGCTCACCATGCTAGTGAACAACaaagttcattaaataatgaatCAAGTGAGCCAAAAGCGCATTATACAAATCTAGAAACAGTTGGTTCATCACAAAGTTCCTATTATATTGCATCTGAGAGCTATCAACCTGCTAATAGCAATGGTTATGCTTACCTGCCTACAACTACAGCTAAAGAAGGCCAATATATCTATCATCCAAACAGTCCCGTATTAtacaaaaCTAAACATCAACCACCACATTATATGcaagtttatgaaaataattccaTGCAAACATCACCACCACAAGCGACTTATTATAAATCTGATCCAAGTGGACAATATGCTTGGCCTGGAGCTATTGATTATAATggaAGTTTTGGTGGTACAATAATAGTAGAAAATCCTCAATCGGATTACATAACAAACGGTCATCATCAATGGCCAATAAGTGCAATAGCAGCTGAGACCTATGATCCGAGCATCATGCAAAGCGATGTTCGCGAATGTGTAAATTGTGCAAGTTCAGACACACCATTATGGCGTCGTGATTTAGCAACGGGTCACAACTTGTGCAATCGTTGTGCATTGTACAATAAGCAGAATAGTGTTCCCCGTCCACCTAATCGACTGCCAAAAGCCAAAGCACCATCAGCTGCTGCGGGAAACAGAAGAAGTGGTTTAAGTTGTAACAATTGTAATACGACAACGACAACATTGTGGCGCCGAAACAGTCAGGGCGAGCCTGTTTGTAATGCGTGTGGACTCTATTATAAGCTGCATAATGTGCCGCGGCctttaacaatgaaaaaagatgGAATCCAGACGAGAAAACGCAAACCTAAAGCACAAACGCCCATGAAGCcaattgAGAAGATTTTGCCGCCGATGATACCATCGCAAATTCAAATGCCACATCATGAAATGCATATCGCAGCCCAACCTTTACCTGCCCATGAACATTATATCAGTGTATCACAGCCATCGGCACATTTGCGTCATGCGccAATTTCGTCATCGATAACAATTGATTCAAATCGTCATATTGAAATTCCTACAAGTCAAGGTGTTATTCAAACTTCTGCTGCTGAGCGAGGGAATTAA
- Protein Sequence
- MVNAKSESIKMDTQQSEIVEQKVEAVTVERVMIAEVNNGNEAVKVEKIVKDPVTVIAVPTSTEVSSSVATSASQVQESIVTSGVQTIPPTTVIATRQRMITTQGHIREISVTQAQDVAEQYEQYQITASGDDQNVYTYEQSPAGIITISQPENLQTTGILKRDILIEKEHSGVSGPTINVVSAEPQTVYVELKNNGEEQARYLSNATIRYEAPDRYHRFPYHGLPPPPPHNSHLQHQREMALKAEGSQHPPPPQELQIYEAEHAAHAHHASEQQSSLNNESSEPKAHYTNLETVGSSQSSYYIASESYQPANSNGYAYLPTTTAKEGQYIYHPNSPVLYKTKHQPPHYMQVYENNSMQTSPPQATYYKSDPSGQYAWPGAIDYNGSFGGTIIVENPQSDYITNGHHQWPISAIAAETYDPSIMQSDVRECVNCASSDTPLWRRDLATGHNLCNRCALYNKQNSVPRPPNRLPKAKAPSAAAGNRRSGLSCNNCNTTTTTLWRRNSQGEPVCNACGLYYKLHNVPRPLTMKKDGIQTRKRKPKAQTPMKPIEKILPPMIPSQIQMPHHEMHIAAQPLPAHEHYISVSQPSAHLRHAPISSSITIDSNRHIEIPTSQGVIQTSAAERGN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00321253; iTF_01249723;
- 90% Identity
- iTF_01249723;
- 80% Identity
- -