Pvan013118.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Polypedilum vanderplanki
Gene Symbol
gata4
Assembly
GCA_018290095.1
Location
CM031379.1:9521169-9532824[-]

Transcription Factor Domain

TF Family
zf-GATA
Domain
zf-GATA domain
PFAM
PF00320
TF Group
Zinc-Coordinating Group
Description
This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 7.3e-18 2.1e-14 52.8 3.2 1 34 477 509 477 511 0.97
2 2 3.2e-18 9.3e-15 53.9 4.7 1 35 585 618 585 619 0.97

Sequence Information

Coding Sequence
ATGTCTTCGACAAGAAATGACGATACATCATATGGCACAAATTCTTCAACAACTACGATCGATCGCACAACATCAGTTGTTCTGAAGACGTCAAGTGATAAGGAGCGACTTGCAGATAGAGACGAGCAAAAAAATAGCAATACTAACAATTTTGAAAGTGAAGAGACAAAAGTGACACGTGAAATTCTTACACCATCGCCGGTAAATTTGAATGTCGATAATAAAAGTTGTTTAGAAATCGATAGTGCTCTCTATACAAGTACATTACCATTAgttgataattttgtaaacaacacACATAGTGGTGGAAAATATTACGAATTCTCATCGACTGGAAATTGTTGGCCTTACGATCTTTCGCGTACATCTAGCAACACACTCGATTATTCGCTTGTAACGCGTGGAAGTGATCAATTAGTGACAAACAGTGCAAATATTTATAGTGCAAATTTTCGTGGTCATCCATACGGCACAACATTCTACAACACGACGACCGCCATGAAAGGTAATATGATGACATTATCGCAATTTGACGTTATGTCgccaccatcatcatcatcttccaCCACCTCTGATTCATCGTCGTATTACGGACAAGACAATaacaattcatcatcattcattaaCATTAACGATTATGCAATTCATCATCAGTCGAGTtatattgatgatttttgtgagattttaaaagatgaaaattatttgttagTCGAAGATGCCGGACATTATACAACCCTTACGAACGCTACAACATCGACTAGTGGCAGTGGACAATTTGATGCCTACTTTCAAGAACATATCCCGAGAAATTATGGTCATCAGCATTCAACATCGAGTGGTGGTGATTCAAGAAGTCCTGATGGTTTCGCAGCCACTGATGACTACGATAATGGCATGCAAAATTTTACTCAGCTAACGAGTCTAACTACACGAAATGGACTTTACACATCATCGCCAGTAAACGTCACTGATAGCATGCTTTCCAACTATGATTCAACCGCAAATAGtTACGCGCGAACTTTTTCGCCTGTTTCATCACAAGCAGCAACCATGTTGCCTTATCTTTCAAGTATCAGCCCCACAATCGAACAGCAAGTAATGTGGCCAGTGAATGGACACAATGATGATTTTATGGATACCAATAACAGAATCGGCAAGCTTCCAGAATTTCAACGACTTACAAATTTTACAACGCAACCGAAAAATACTCATTATACATCAAATTATAATCAgAATGATTGGTCATCATCATATTTGTCATCTACAATTTCAACATCAAATGGTCATGATACAAAATTGACAATTCCATCGCTTCCAGTTGTAACACAGCGTGGTCGACCAGGAGTAACTCATTTATCCGCCTCACAATCACTATCAGCCATGCCGCAGACATTTATCTACGATGATTCGTGTGATATTGGTCGTGAATGTGTCAACTGCGGTGCAATAAGTACACCATTATGGCGTCGTGATGGAACTGGTCACTATTTGTGCAATGCTTGTGGActttatcataaaatgaatGGCATGAATCGCCCTCTTGTTAAGCAGCCCAGAAGATTAGTAAGCAAAGTagattcaacaattttaatttcatttttattttttattacatttctaggaaagataaaaaTGGCTGGATCgagtgaaatttataaaacgcCATTGCTCTATCCACCACCTGGTAATAGTGCACCACGCGAAGAAAAACAATCGCGACGTACGCCTGCTGCACGTCGTACAGGattaaaatgttcaaattgCAATACCGTGAATACTTCACTATGGCGTAGAAATGCACAAGGTGAACCTGTTTGTAATGCATGTGGATTGTACTATAAACTACATAATGTCAATCGACCAATCACcatgaaaaaagaacaaattcaaacaaGAAAACGTAAACCAAAAGGCATGAAAAATCCAGATGGAACttcaaaaaaaggaaaaatgaatGTTAGTTGTGATTACATGGTAAAtggcaaaatttcaaatgcccgtaaaacaaaaaacacCAAAGGACTGACAATAGAAACACCAATGCCAACAACTGAACAAAACCAAAGCAGCTCATCATCAGGCTCATCTTCAAcgtcatcatcgtcatcaaatTCATCACCTAATTCACAAAATTCACCCCAAGTTGCATCACCACTTTCGCATCATTCACCAATGACTttaCCAAGTTTAACACCACGTCCTGTAGTATCAGGAATGGGCACTTGTTCGAGTGTAATCACAACATCTCCAAATATGACGTCGTATCCGCCATTGACACCACTCCCACAACTCAACAGCCACTTGTACAATTCATCACTCTTGAGTCCGAATGCCGACAGCAATCAATCATCTTTTCAATCAAACTTTGCTAACTTAAATCATCTCATAAAAACAGAAGATGGTGCACATATCGCACTAAATAACAATGATATTAATAGCAAGGCAATTGATTTGGAACTTAAACATCGTCAGCTGCTGGCAAATATTGAATCTCGATAG
Protein Sequence
MSSTRNDDTSYGTNSSTTTIDRTTSVVLKTSSDKERLADRDEQKNSNTNNFESEETKVTREILTPSPVNLNVDNKSCLEIDSALYTSTLPLVDNFVNNTHSGGKYYEFSSTGNCWPYDLSRTSSNTLDYSLVTRGSDQLVTNSANIYSANFRGHPYGTTFYNTTTAMKGNMMTLSQFDVMSPPSSSSSTTSDSSSYYGQDNNNSSSFININDYAIHHQSSYIDDFCEILKDENYLLVEDAGHYTTLTNATTSTSGSGQFDAYFQEHIPRNYGHQHSTSSGGDSRSPDGFAATDDYDNGMQNFTQLTSLTTRNGLYTSSPVNVTDSMLSNYDSTANSYARTFSPVSSQAATMLPYLSSISPTIEQQVMWPVNGHNDDFMDTNNRIGKLPEFQRLTNFTTQPKNTHYTSNYNQNDWSSSYLSSTISTSNGHDTKLTIPSLPVVTQRGRPGVTHLSASQSLSAMPQTFIYDDSCDIGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLVKQPRRLVSKVDSTILISFLFFITFLGKIKMAGSSEIYKTPLLYPPPGNSAPREEKQSRRTPAARRTGLKCSNCNTVNTSLWRRNAQGEPVCNACGLYYKLHNVNRPITMKKEQIQTRKRKPKGMKNPDGTSKKGKMNVSCDYMVNGKISNARKTKNTKGLTIETPMPTTEQNQSSSSSGSSSTSSSSSNSSPNSQNSPQVASPLSHHSPMTLPSLTPRPVVSGMGTCSSVITTSPNMTSYPPLTPLPQLNSHLYNSSLLSPNADSNQSSFQSNFANLNHLIKTEDGAHIALNNNDINSKAIDLELKHRQLLANIESR

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01249724;
90% Identity
-
80% Identity
-