Pvan014063.1
Basic Information
- Insect
- Polypedilum vanderplanki
- Gene Symbol
- pnr
- Assembly
- GCA_018290095.1
- Location
- CM031379.1:9486326-9501141[-]
Transcription Factor Domain
- TF Family
- zf-GATA
- Domain
- zf-GATA domain
- PFAM
- PF00320
- TF Group
- Zinc-Coordinating Group
- Description
- This domain uses four cysteine residues to coordinate a zinc ion. This domain binds to DNA. Two GATA zinc fingers are found in the GATA transcription factors. However there are several proteins which only contain a single copy of the domain.
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.4e-18 9.9e-15 53.8 3.2 1 34 111 143 111 145 0.97 2 2 1.4e-18 4e-15 55.1 6.1 1 34 166 198 166 200 0.98
Sequence Information
- Coding Sequence
- ATGTTTCATTCCACACCATCATCGTACTCTGAAATGACCTCAGTAGCTAGCAATACTGCATCATTTCATCAAACAACAAACACGACGGCAAACACACCTGTCTACGTGCCATCAAATCGTGCTATACATTCACAGTATGCCGGACATGCTGGTAATTACACAAATGCACAGAATGCGTGGCCCACTGAAAGTGCCTTTGGTTCAACACATTCCCCATTTTACGCACAAAACATGATGTACATGCGAGCCTACGATCCATCCGGATTTCAACGAACTTCACCATATGGAATGGAAAGTGCAATGGACTTTCAATTTGGCGAAGGTCGTGAATGTGTCAACTGCGGTGCAATAAGTACACCATTATGGCGTCGTGATGGAACTGGACACTATTTATGTAATGCTTGTGGActttatcataaaatgaatGGCATGAATCGACCACTGATTAAACCCAGTAAAAGACTGCAAACAGCAACAAGACGATTGGGATTGTGTTGTACAAATTGTGGTACAAGAACAACAACATTATGGCGTAGAAATAATGAGGGTGAACCAGTATGTAATGCATGCGGTCTCTATTTTAAGTTGCATGGAATTAATCGACCACTTGCTATGCGAAAAGATGGAATTCAAACACGAAAAAGAAAGCCGAAGAAGGCTGGAACAAGTGGACCAGAATTATTGGGACTTGTTAAGAAGGAAGacttccatcatcatcatgatgacTTGAAATCAACAAGTTTAACTGATCGTAATGGAAATGCAAAGTTATTATTGCCTGGCAGTCCAAAATTACTTCAAAAAAGTCACATTTCACCAATTCACACGCACCATCATCATCCGCATCATCATCAATCATCTTATTCATTGACATCGCCAATGCAAAATGTAAACACACCATCTAAATTCGATTTACAGCCATCATCAAATACTGTGGCTGCTTCATCTACTGCTACTGCCATTTCATCAAGTGCATCATCACACAATAACACAAATAATAATCATTCATCAACAGTCTCATCGCATCTTTATACTTCACCGTTGATATCGTCAACACAGAGCAATTTGCATAGCTCGTATTTGCATAATAACAGCTTAACGAGTTCGTCATATGGCGCAATCAAGTCTGAATCCAACATTCCCGGCATCACGAATCCAGCAAGCATGATAAGTGGAAATTATGACTATATGAGTAATTGCATACAGAATGGATATTTTGGAGGCACATTTGGTTTGCCCAATGGTACTGCACATCATACAGATTTGAGTGGATATCATCATCAGCATAATGTTATACAAGCTGCAAAATTGATGGCAACATCTTAG
- Protein Sequence
- MFHSTPSSYSEMTSVASNTASFHQTTNTTANTPVYVPSNRAIHSQYAGHAGNYTNAQNAWPTESAFGSTHSPFYAQNMMYMRAYDPSGFQRTSPYGMESAMDFQFGEGRECVNCGAISTPLWRRDGTGHYLCNACGLYHKMNGMNRPLIKPSKRLQTATRRLGLCCTNCGTRTTTLWRRNNEGEPVCNACGLYFKLHGINRPLAMRKDGIQTRKRKPKKAGTSGPELLGLVKKEDFHHHHDDLKSTSLTDRNGNAKLLLPGSPKLLQKSHISPIHTHHHHPHHHQSSYSLTSPMQNVNTPSKFDLQPSSNTVAASSTATAISSSASSHNNTNNNHSSTVSSHLYTSPLISSTQSNLHSSYLHNNSLTSSSYGAIKSESNIPGITNPASMISGNYDYMSNCIQNGYFGGTFGLPNGTAHHTDLSGYHHQHNVIQAAKLMATS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01249722;
- 90% Identity
- iTF_01249722;
- 80% Identity
- -