Basic Information

Insect: Polypedilum vanderplanki
Gene Symbol: L
Assembly: GCA_018290095.1
Location: CM031381.1:24778330-24791268[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 2.9e-05 0.0013 19.0 2.0 1 23 154 176 154 176 0.98

2 15 0.021 0.94 10.0 4.6 1 23 182 204 182 204 0.98

3 15 2.9e-05 0.0013 19.0 3.2 1 23 210 232 210 232 0.99

4 15 6.9e-05 0.0032 17.8 0.5 1 23 238 260 238 260 0.98

5 15 0.07 3.2 8.4 2.2 2 23 314 337 313 337 0.91

6 15 0.00079 0.036 14.5 0.3 2 23 362 384 361 384 0.95

7 15 0.3 14 6.4 0.6 1 23 469 491 469 491 0.95

8 15 0.0088 0.4 11.2 1.2 1 23 553 576 553 576 0.92

9 15 0.21 9.7 6.9 0.5 1 23 579 602 579 602 0.93

10 15 0.0093 0.43 11.1 4.9 2 23 606 628 605 628 0.96

11 15 0.032 1.5 9.5 2.6 1 23 661 683 661 684 0.96

12 15 0.025 1.2 9.8 0.3 2 23 869 893 868 893 0.93

13 15 0.18 8.2 7.1 0.0 1 23 899 921 899 921 0.95

14 15 0.02 0.91 10.1 0.1 2 23 1060 1081 1059 1081 0.96

15 15 0.2 9.2 6.9 1.7 2 23 1091 1112 1091 1112 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	2.9e-05	0.0013	19.0	2.0	1	23	154	176	154	176	0.98
2	15	0.021	0.94	10.0	4.6	1	23	182	204	182	204	0.98
3	15	2.9e-05	0.0013	19.0	3.2	1	23	210	232	210	232	0.99
4	15	6.9e-05	0.0032	17.8	0.5	1	23	238	260	238	260	0.98
5	15	0.07	3.2	8.4	2.2	2	23	314	337	313	337	0.91
6	15	0.00079	0.036	14.5	0.3	2	23	362	384	361	384	0.95
7	15	0.3	14	6.4	0.6	1	23	469	491	469	491	0.95
8	15	0.0088	0.4	11.2	1.2	1	23	553	576	553	576	0.92
9	15	0.21	9.7	6.9	0.5	1	23	579	602	579	602	0.93
10	15	0.0093	0.43	11.1	4.9	2	23	606	628	605	628	0.96
11	15	0.032	1.5	9.5	2.6	1	23	661	683	661	684	0.96
12	15	0.025	1.2	9.8	0.3	2	23	869	893	868	893	0.93
13	15	0.18	8.2	7.1	0.0	1	23	899	921	899	921	0.95
14	15	0.02	0.91	10.1	0.1	2	23	1060	1081	1059	1081	0.96
15	15	0.2	9.2	6.9	1.7	2	23	1091	1112	1091	1112	0.95

Sequence Information

Coding Sequence: atgaCAAGGAGAAAGCAATTAAAGCCTCGTGCTTTGACGGTCAAACAGAATGCGGAAGCAGAAGAGGATGATAATAAGACTCTTCGTTCGAGTTCAATCGATGAACAAAGCGAGGAGCAGAATGATGCAAAAACAGCAGTTATATTTGCTGCAGTAGCAAAGGATGGATCAGAAGTGCCAGATGagattcaaaataaaaacattgcgAACAATGATAAGAAAGATGATGCCGAtagagaagagaaagaagCAAATTATGAGTCTGACAATTCAGATTGCGACAGTATTGGTTCTTATTCATCAGAACTCTATTCTTCGCATTCATCAATCAGTTTTCCATCGTCAAGTAACAGCACATCAGAAGAGATGGAGACAAATGAGATTGATGTAGATGATCcgattaagaaagaaaagaaggacAAGAGTGGCAGCAGCAGTAAATTTAAAGGCGCATCAAGTTACAAGTGTCAGTTCTGTGAGAAATCATTTCCACGATTAGGATATTTAAAGAAACATGAACAGAGTCATGAAGACTATATGCCATTCAAATGTCCTGTATGTCAGAGATTATTTAAGCATAAGAGATCAAGAGACAGACATTTGAAGTTACATACTGGTGACCGTAGATATAAATGTCTATTTTGTGAATCTGCATTTTCGAGAAgtgatcatttaaaaattcatatgaaGACACATGACAGTAAAAAAGCATTTCAATGCAGTTTTTGTAATAGAGGCTACAATACTGCAGCAGCGCTTACTTCACACATgcaaaatcacaaaaaacaaaatgaattacGTGAAAGAAATGAATCTCCTTATAATTATAGTATGAAATCAGAGTCTTCGTCGACTTCAACGACCGATAAGAAAAGGATCGAAATGATTTCACCTAAATCTGTTAAATCAGATagtcaatttgaaataaaaaatcaaattcgtTGCTTTTATTGCacaaaaactaatttttcaactcttgAACAATTGACTCATCATATCAATATCATGCATAATCATAGATTGATGAATGAAAGGAAGACTAATAGCAGAAGCGAACAGCAGCAGCTTGAATCACATTTTATCTCATGTGAATATTGTCTCATGAAATTCAGTTCATCGGAAAAGCTTATTAAGCACATACAATTAGTTCATGAAAATAGATTACAAGCGAACGAAGAATTTTTGAGTCCAAAAAATGTCGATTCACCAAATTCTCAAGTGCAGCAACATAATGCtttagaaaataagaaaaattctagTAGATATAGTGAGCATGAAGAACAACCAACAGATTTAAGTCAAAGGATTGTTAAAAAGATCAAAatggagaattttaattatgctGTGCCGAAACTCTTTGAAGCGCCGACATTAGGCAGAGCTACACCTGGAACACCGGACGTCTTTTTATGCAATCAATGTAATGCATCTCTTCCCAGCTTTGAACTCTTCCGactacatttaaaaaatcaccTCGAAGAGAGCTATGGCAGTGTTGGGGGCACTCGCAGTAGCGAGTATTTTGAATtgagcagcaacagcaacaataaTGCATTTTATCATtcacaaaagaaattcatatgTCAACAGTGCCGTGATGTTGTGTTTGATAATCGTTTTGAATATGATCAGCATATTGAGCAGCATTATACAGAGTTTCTGTGTCAAGAATGTGACGATTCTTTTACAAAACATGAAGATTTGCAGAATCATTTGTTGGAAAATCACGTTCGTTTCAAGTGCACGTTATGCAATGAGAGCCTCGAATCCATAATGTCACTTAAGCTACATTTTGCATCAAGACATTCAGATAAAAGGTGTTCAACATGTCATGAGTTCTTTCGATCTGAAcgagattttaaaaatcatattcaGAGCAAGCACTCGTCCGTTGATTTAATCAAATGCATTTTTTGTCGTGTCACATGTTCGTCCGAACTTGAgatgcattttcattttctttcgaCACATGTTAAACAGTTTAGATGTCCCGCATGTTCAGAATCATTTCATGTGGAATTTCTTCTCGATCGTCATTTACAAACTCATCATTCAGTAAATGAATCTCAAGTAAATTCAACCTTTAATATTGATAAAGAGAcattgaatttacaaaattatcatccgtcattaattgaaagttatagagaaaagtttcttttaaatcaTGATCCTAAAATGAATGATGCAAGCAATTTCTTGCATAAATTAAATCCATCAGTATTTCCGCTCAATCCATTAAATAATCagtatacaaaaaatattaatttgagCTCACTGCATGATAGTTTGAGTAGAGTTCAATCGACAATTGATGAacatcaacagcaacagcaaagtATGCGAGTTAAAAATCTATATCATTTGACTAGTGaagcaataaataaacaaattaattcaaattctgATGCTCAATCGACGTCTTTTAAACtacaaaatttgtcaaattcaaATAGTATTATCGTAAATGATaagaacaataataaaaactctAGTTTTAAAGAGAAAACAGAAGCATCAtcacaacagcaacagcagcctGAGTCATCTACAGAAAAATCTAGTCACATAATTCATCTAAATACAAAGACTGGTGTAAGCTTAAAATGTGCATATTGTGAAGCTCGAGAGGATTTCAAATCGAgAACCGAATTGGAAAATCATATGAAAGTACAACATAATATTGCAGCGAAGCATAAATGTTCAATATGCGATGAAATATTACCAAGTCCGGCAgTATTGGCTGAACATAAGCTACAACATTGTAAAGTAATTTCTGGAAAATGTTTCCACTGTGCAGACTCGATTGAAAATATCAATGATTTTAAGCAACACATTCAGAATCATAACCAAAAGAATAAAGCTTCTTTAGAGTTACCAGTTCATTGCATTTGTTGCCATCAATTACTTACATctgattttgaaattaatttacatgctaaatttcATACAAACACTGCAAGTACATCCATAGctaatgatgaaaaaacttGTGCTCTATGCCTAAATGTTATGGAACATACAAATGTTAAAAAGATTTGCAATTCTTGCATGACAAAGCATAACTTTTCATTGTCAAAAAATCAGTTGCAGTTATGCAATTTATGTAAGCAGAACATTGAATGTGAAAAGTTTCAAGATCATTTGATTGAACATGGtttcaaaaatgaatcaattagTTGTGTAATttgtaattcaattttcaccACAATTAATGGTTTGAAGGAGCATTTGCGTGAACATAAAATTACTCCTTTAGATTTTAAGGAAACATGCAGCAAGTGCAATGCAAGATTTCTTTATCCGTCGGAACTTGAACATCATAGTAAAGAGCATGAATTGGTTGAGGatcaagcaaaaaatattaaacaagaGAATGTAGATGAAGACacaataatgaaagaaataaaggaTGAAGAAGAGGACGATTATATTGAGATTGAAAAGGTCCATGAAAATTAA
Protein Sequence: MTRRKQLKPRALTVKQNAEAEEDDNKTLRSSSIDEQSEEQNDAKTAVIFAAVAKDGSEVPDEIQNKNIANNDKKDDADREEKEANYESDNSDCDSIGSYSSELYSSHSSISFPSSSNSTSEEMETNEIDVDDPIKKEKKDKSGSSSKFKGASSYKCQFCEKSFPRLGYLKKHEQSHEDYMPFKCPVCQRLFKHKRSRDRHLKLHTGDRRYKCLFCESAFSRSDHLKIHMKTHDSKKAFQCSFCNRGYNTAAALTSHMQNHKKQNELRERNESPYNYSMKSESSSTSTTDKKRIEMISPKSVKSDSQFEIKNQIRCFYCTKTNFSTLEQLTHHINIMHNHRLMNERKTNSRSEQQQLESHFISCEYCLMKFSSSEKLIKHIQLVHENRLQANEEFLSPKNVDSPNSQVQQHNALENKKNSSRYSEHEEQPTDLSQRIVKKIKMENFNYAVPKLFEAPTLGRATPGTPDVFLCNQCNASLPSFELFRLHLKNHLEESYGSVGGTRSSEYFELSSNSNNNAFYHSQKKFICQQCRDVVFDNRFEYDQHIEQHYTEFLCQECDDSFTKHEDLQNHLLENHVRFKCTLCNESLESIMSLKLHFASRHSDKRCSTCHEFFRSERDFKNHIQSKHSSVDLIKCIFCRVTCSSELEMHFHFLSTHVKQFRCPACSESFHVEFLLDRHLQTHHSVNESQVNSTFNIDKETLNLQNYHPSLIESYREKFLLNHDPKMNDASNFLHKLNPSVFPLNPLNNQYTKNINLSSLHDSLSRVQSTIDEHQQQQQSMRVKNLYHLTSEAINKQINSNSDAQSTSFKLQNLSNSNSIIVNDKNNNKNSSFKEKTEASSQQQQQPESSTEKSSHIIHLNTKTGVSLKCAYCEAREDFKSRTELENHMKVQHNIAAKHKCSICDEILPSPAVLAEHKLQHCKVISGKCFHCADSIENINDFKQHIQNHNQKNKASLELPVHCICCHQLLTSDFEINLHAKFHTNTASTSIANDEKTCALCLNVMEHTNVKKICNSCMTKHNFSLSKNQLQLCNLCKQNIECEKFQDHLIEHGFKNESISCVICNSIFTTINGLKEHLREHKITPLDFKETCSKCNARFLYPSELEHHSKEHELVEDQAKNIKQENVDEDTIMKEIKDEEEDDYIEIEKVHEN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01249434;
90% Identity: iTF_01249434;
80% Identity: -