Basic Information

Insect: Polypedilum vanderplanki
Gene Symbol: su(Hw)_1
Assembly: GCA_018290095.1
Location: CM031381.1:23816111-23820019[+]

Transcription Factor Domain

TF Family: zf-BED
Domain: zf-BED domain
PFAM: PF02892
TF Group: Zinc-Coordinating Group
Description: The BED finger, which was named after the Drosophila proteins BEAF and DREF, is found in one or more copies in cellular regulatory factors and transposases from plants, animals and fungi. The BED finger is an about 50 to 60 amino acid residues domain that contains a characteristic motif with two highly conserved aromatic positions, as well as a shared pattern of cysteines and histidines that is predicted to form a zinc finger. As diverse BED fingers are able to bind DNA, it has been suggested that DNA-binding is the general function of this domain [3].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.34 2.3e+02 1.9 0.0 17 28 48 59 41 67 0.82

2 10 0.019 13 5.9 0.8 17 40 152 172 144 177 0.76

3 10 0.00044 0.3 11.1 0.1 18 40 187 206 180 216 0.89

4 10 0.16 1.1e+02 2.9 0.2 17 29 218 230 207 240 0.75

5 10 0.067 45 4.1 1.0 18 36 277 292 265 304 0.78

6 10 0.37 2.5e+02 1.7 3.6 18 39 305 323 292 326 0.78

7 10 0.00036 0.24 11.4 2.9 14 42 329 354 322 356 0.83

8 10 0.0052 3.5 7.7 1.9 13 43 357 389 353 390 0.77

9 10 0.52 3.6e+02 1.3 0.5 17 28 389 400 384 409 0.82

10 10 5e-06 0.0034 17.4 2.9 14 44 414 441 406 441 0.86

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.34	2.3e+02	1.9	0.0	17	28	48	59	41	67	0.82
2	10	0.019	13	5.9	0.8	17	40	152	172	144	177	0.76
3	10	0.00044	0.3	11.1	0.1	18	40	187	206	180	216	0.89
4	10	0.16	1.1e+02	2.9	0.2	17	29	218	230	207	240	0.75
5	10	0.067	45	4.1	1.0	18	36	277	292	265	304	0.78
6	10	0.37	2.5e+02	1.7	3.6	18	39	305	323	292	326	0.78
7	10	0.00036	0.24	11.4	2.9	14	42	329	354	322	356	0.83
8	10	0.0052	3.5	7.7	1.9	13	43	357	389	353	390	0.77
9	10	0.52	3.6e+02	1.3	0.5	17	28	389	400	384	409	0.82
10	10	5e-06	0.0034	17.4	2.9	14	44	414	441	406	441	0.86

Sequence Information

Coding Sequence: ATGGGTCGTAAGAAAGGAAGCGTAAATAGTAAAAGTAAAGCAAAGCCTTCAACGCAAACAAAGCTCAATTTTCCAGTAGTAAAAAAGGATGAAGAGAAGCCGGTTGCAGCAGTGCCGATTTTAGAGGCGCCTTTAATGATATTTGTATGCAGACGTTGccataataattttgattcaaCAGAATTATATCAAATGCACAATTGTCCAGCTCAATTATTCGCAATAGTTGAAACTGATGAAACTCGAGAAACAAATGAAACAATTACTACTGAAGAAAAGTCAccagaaaaatcaaaatcaccacaaaataaagatgaaactcctaaaaaatctaaaactaCCGAAAGCCAAcaagatgaaaatgataatgaaacaATTGTTAAGGAGAAGAAACCAAGAAAACCATATAAGAAacgtgaaaagaaaaaggaagatGAGGAATCAAAAGTACCTATCGCATGCGAAAAATGTGGCAAATCATTTACACGTAAATATCATCTTGAACGACATTTAACTCATACACAGTGCAATCCTGGAACTTtcaagaaagaagaatttaactGCGAAGTTTGTGGCAAAGTGTTTTCACGCGTTGATAATCTTCGTATGCATTTACGAGCTCATTTAGGTCAAAAATCAAGATCCAGAgACTTTCAATGTCCTTACTGTGAAAAATCATTCTATGGATCATCATTGCTCAATATTCATATACGATCACATACAAGGGAAAAGCCTTATTTGTGTGATTGGGAAAATTGCGGGAAAGGTTTTCCAAGTTCTGGAGCTTTAACAAAGCATCGTCGAACACATACAGGAGAACGTCCATATGAATGCAAAATTTGTGGTAATCGATTTGCAGCCAAAGAAACTTTGAATCGTCATACTCGAACacaCACTGGAAGACGAGACCACGTCTGTAGAATTTGTGGAAAGAGCTTTATTCAGAATACACAATTACGCGCTCATATGTTTCATCATACTGGCGAACATGCGTATACTTGTGATTTATGCGGAAAACAATTCAATCGAAAGACTCGAATGCGCGAACATCTCGAGTACAttcatttagaaaagaaaatgccTACGTGCAACATGTGTTCTAAAACATTTATGCGTCGTGAAGATTTATCGCGTCACATTGAATCACATATTGGTGAACGAAATCATACTTGTTCAATTTGTGACAAAAAGTTTGTCACAAAAGCTGCTGCTAGAATTCACATgAGAATTCATCAAGTTGAAGATCCAGCACGCTGCAATTATTGTAACAAAGATTTTTTGCGTATGGATTGCTTGGTTCGACATGTTCGCTCTAAACATCGTGATATGTTGCAGCAAATAATTGTCGAAGCTGAAACAAATAGAATCATTTCGGCTcaacaaagtaaaatttcagaTGTTGAGGAGCTTGAAATTATTGTCTATAATGAAGAAGATTCTCAGGATGCAGAAGCAAGAGGGGAAGTTTATGAAGTTGTCAATGTTGAGGAAGTAGTTGCTGTTAAACCAAAGGCAACTACAAAGAAAGTAGTTGTGTCTAAAtcagaagatgaagaagattgTACACCAATATTTTTGAACGACGATCTTCTCATGAAGAGAATTCAAGAATTATTGCAAATTGTCATTGAAGAAAGCCTTTTGAAAGAACTAGGGTTTGGCAAAAAGCCAATCGATGAAGTATTATGCTCAGTGCTTGAGCAATGCAGTCATAAACCGTTAAGAAAATCTGATGGAGTTTTAGATGATGATTCAACAAGAATGCGTGAAAACACTAAACAACTGTTTTCAATGGTACTCGATGAAGAACATATTAAAAGTTTGCTTAATAATTATACAGTTGATGAAGTAATCACAATTGTCCTAAAAatggcaaaataa
Protein Sequence: MGRKKGSVNSKSKAKPSTQTKLNFPVVKKDEEKPVAAVPILEAPLMIFVCRRCHNNFDSTELYQMHNCPAQLFAIVETDETRETNETITTEEKSPEKSKSPQNKDETPKKSKTTESQQDENDNETIVKEKKPRKPYKKREKKKEDEESKVPIACEKCGKSFTRKYHLERHLTHTQCNPGTFKKEEFNCEVCGKVFSRVDNLRMHLRAHLGQKSRSRDFQCPYCEKSFYGSSLLNIHIRSHTREKPYLCDWENCGKGFPSSGALTKHRRTHTGERPYECKICGNRFAAKETLNRHTRTHTGRRDHVCRICGKSFIQNTQLRAHMFHHTGEHAYTCDLCGKQFNRKTRMREHLEYIHLEKKMPTCNMCSKTFMRREDLSRHIESHIGERNHTCSICDKKFVTKAAARIHMRIHQVEDPARCNYCNKDFLRMDCLVRHVRSKHRDMLQQIIVEAETNRIISAQQSKISDVEELEIIVYNEEDSQDAEARGEVYEVVNVEEVVAVKPKATTKKVVVSKSEDEEDCTPIFLNDDLLMKRIQELLQIVIEESLLKELGFGKKPIDEVLCSVLEQCSHKPLRKSDGVLDDDSTRMRENTKQLFSMVLDEEHIKSLLNNYTVDEVITIVLKMAK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01250363;
90% Identity: iTF_01250363;
80% Identity: iTF_01250363;