Pvan012729.1
Basic Information
- Insect
- Polypedilum vanderplanki
- Gene Symbol
- SMARCC2
- Assembly
- GCA_018290095.1
- Location
- CM031379.1:9105967-9110062[+]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.3e-14 1.6e-11 44.1 0.1 3 44 624 665 622 667 0.95
Sequence Information
- Coding Sequence
- ATGAATTTAGGACCGAAAAAAGATGGAAGTCCAAATGTAGAGTTTTTTACATCACCTGAATCACTTCAGGGATTCGAGACTGTTCGATTATGGCTACAAaaacatcataaaaaaTATATTCAGGCTGATCCACCAACAAAAGAGAGCCTTGCACAGCTCATTATTCAATTAATACAGTATCAAGAAACAAAACTTggtaaaaattctcaagaTACATCGATGACAACAAGACTTCCGatgagattttttcatgatttcaAACCTGGTGGAGCACTTTGTGTCATTTTATCAACAATGTATCGCTTCAAGAGTGATCAACGTTggagaaaatttgatttcactGTTAGCAAaACATCATCCAAAAAAGATCCAAATCTTCAATTGCTTGTTGAAATTGAATCAAGTTTGATTGACGCTGAAGTTTTTAGACTTCCAACAATTTACATTAGACCAGAAGTTGATCGACAACTTGCAGCAAGAATACGTGAAATTATTACAAATCATCAAGCTGAAATAacagaagatgaagaagaagcgACACATATTGTGTATCCAGAAGTTGATCCTCTGCCTGAAGAATATGCGAGACCGCTATTTAAACGTGACAAATATGTCATGCTGCATTGGTATTATTTTCCAGAATCATACGATTCTTGGGTTCCAAATAATTTCGATTTACCTGACAATGTTCCCGATTGTCCTGCATCACCTGCCGATCATTGGCGTGTTTCTGCTCAGTGGGTTCGTGATCTTGATCAATATAATGAATGGATGTCAGAAGAAGATTATGAAGTTGATGAACAAGGACGTAAGAAAGTtcataaattaagaatttctgTTGAAGATCTTATGTCAGCTGATGGTGATAAGTCAAAGAAACAAATGGCATCAAAAGGTAAACGTAAGCGCTCACCAtcaccaaaaaatcaaaaaagaaagtcaGGAAGATCACCAGCTGTTTTTCAACAGAAAAAATCAcgtgctgatgatgatgagtctGAAGATTTGACAAAAGATATGGACGATCCTTCAGCTGAACCAAATGTTCAAGAAGTTAAACCATCAATTAGCGCAGCAACATCTGGTCCAGCGACACCAACAACAAAGCGTGATCCTGATATGGCACCACTTAAAAGTTCAGTTGTTCAAGATTTAGATGAAGATATGGAACGAGGTGAAGATTCACAGACTGGAAAAGCAAGTGAAAATAGCAACACACAAGATTTTGCTAATAAAGATGATGTTGAGGATAACAATGTTACAGAACAAACTCATCACATTATAATACCATCATATTCTGCATGGTTTGATTATAATTCAATTCATGTTGTTGAAAAACGTGCTCTACCAGAATTCTTTAATGGTAAAAATAAGTCAAAGAGTCCAGAAATTTATCTAGCTTATCGTAACTTTATGATTGACACTTATCGCTTGAATCCAACTGAATATTTGACAAGCACTGCATGTCGTCGTAATTTGGCAGGTGATGTATGTGCTATTATGAGAGTTCATGCATTTTTGGAGCAATGGGGGttgataaattatcaaattgatGCTGAATCTCGTCCTACACCGATGGGACCACCACCGACATCACATTTCCATATTTTGAGCGATACTCCATGCGGTTTACAGCCAATTAATCCACAAAAAATTCCACAACCACTTGCTGCATCAAAAGCATTATTGGATTTGGATAAGAAAATGCCAGAAAAGAAAGATAGTGATCCCAATGCACCACAAACACCAGCAACAATTAAACAAGAGCCTGGTGAGTTGGCTCCTGGTACACAGTTTGGCCTAAGATTAGATCAATATGCAAAGAAACCAGCAGCAATGAAGAACAAAACAGCAGCAAGTATGACACGTGAATGGACAGATCAAGAAACTTTGTTACTACTTGAGGGTTTAGAAATGTACAAAGATGATTGGAATAAAGTGTGCGAACATGTTGGATCACGAACACAAGATGAATGCATTCTGCACTTTTTACGATTGCCCATTGAAGATCCATACCTTGAGGATGATAGCACATTTTTGGGTCCATTAAGTTACCAACCAATTCCATTCAGTAAAGCAGGAAATCCAATTATGTCAACAGTTGCTTTTCTAGCATCTGTCGTTGATCCACGAATTGCAGCGAGTGCAGCAAAAGCAGCAATGGAAGAATTTGCAGCAATCAAAGATGAAGTTCCAGCAGCCATGCTTGATGCACATTTAAAGAATGTTGAAAAGACAAATTTCGGTGGTAAATTTGATCCATATGCTGGTCTATCAACAAGTGGCATTGCAGGCACAGCaccagaaaaagaaaaggatgaaaatgctgaaggtgaaaaagaaaagtcgaCAAGTGAAGATGTTGAAATGAAAGATGCCACAAAGAAAGATTCAGataaagaaaaagaaacaactGAACCAGAAAAACCTGAGGCAGttgatgataaagaaaaagatacTAAAAAATCTGATTCTGAAACGACAGATAAAGACAAAGATGGTGCGGCAGCTGTAAAGAGCGAAGCGATTGATGGCGAGAAGAAGACTGATGAGAAGCAAGATAAtgaggaaaaagaagaaggtgTCGAATcgagaaagatttttaatgaagGCAATTTGCAGTCAGCAGCAGCAGCCGCTTTAGCCGCAGCAGCTGTAAAAGCGAAACATCTTGCCGCagttgaagaaagaaaaattaagagtTTGGTTGCATTACTTGTTGAGAcacaaatgaaaaaacttgaaattaaacTGCGTCATTTTGAAGAACTGGAAACAACAATGGAACGTGAGCGTGAAGGACTTGAATATCAAAGACAGCAACTGATACAGGAACGACAACAATTTCATTTAGAACAATTGAAAGCTGCTGAATTCAGAGCACGTCAGCAAGCACATCAACGTTTCCAACAAGAACATGGCCCATGGCAGAATCCAAATCATCCAATTCCTTCAAACATGCCACCACAGCAGCATCCGATAGGTGTTGGTCAAAATACACCACAAATCGCACAAGCACAACAGCAACCACCACCTCCAACTGCACCCAATGATGCAACACCTCCGAATTCCGCTGTACCAACTTCACAGCATGCAATGCCACCACAGCAGCCACAAAATTCAAATCCAATTCCACCTGCTGCAACTGGTGTACCAACTTAA
- Protein Sequence
- MNLGPKKDGSPNVEFFTSPESLQGFETVRLWLQKHHKKYIQADPPTKESLAQLIIQLIQYQETKLGKNSQDTSMTTRLPMRFFHDFKPGGALCVILSTMYRFKSDQRWRKFDFTVSKTSSKKDPNLQLLVEIESSLIDAEVFRLPTIYIRPEVDRQLAARIREIITNHQAEITEDEEEATHIVYPEVDPLPEEYARPLFKRDKYVMLHWYYFPESYDSWVPNNFDLPDNVPDCPASPADHWRVSAQWVRDLDQYNEWMSEEDYEVDEQGRKKVHKLRISVEDLMSADGDKSKKQMASKGKRKRSPSPKNQKRKSGRSPAVFQQKKSRADDDESEDLTKDMDDPSAEPNVQEVKPSISAATSGPATPTTKRDPDMAPLKSSVVQDLDEDMERGEDSQTGKASENSNTQDFANKDDVEDNNVTEQTHHIIIPSYSAWFDYNSIHVVEKRALPEFFNGKNKSKSPEIYLAYRNFMIDTYRLNPTEYLTSTACRRNLAGDVCAIMRVHAFLEQWGLINYQIDAESRPTPMGPPPTSHFHILSDTPCGLQPINPQKIPQPLAASKALLDLDKKMPEKKDSDPNAPQTPATIKQEPGELAPGTQFGLRLDQYAKKPAAMKNKTAASMTREWTDQETLLLLEGLEMYKDDWNKVCEHVGSRTQDECILHFLRLPIEDPYLEDDSTFLGPLSYQPIPFSKAGNPIMSTVAFLASVVDPRIAASAAKAAMEEFAAIKDEVPAAMLDAHLKNVEKTNFGGKFDPYAGLSTSGIAGTAPEKEKDENAEGEKEKSTSEDVEMKDATKKDSDKEKETTEPEKPEAVDDKEKDTKKSDSETTDKDKDGAAAVKSEAIDGEKKTDEKQDNEEKEEGVESRKIFNEGNLQSAAAAALAAAAVKAKHLAAVEERKIKSLVALLVETQMKKLEIKLRHFEELETTMEREREGLEYQRQQLIQERQQFHLEQLKAAEFRARQQAHQRFQQEHGPWQNPNHPIPSNMPPQQHPIGVGQNTPQIAQAQQQPPPPTAPNDATPPNSAVPTSQHAMPPQQPQNSNPIPPAATGVPT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00320537;
- 90% Identity
- iTF_01249039;
- 80% Identity
- -