Pvan010828.1
Basic Information
- Insect
- Polypedilum vanderplanki
- Gene Symbol
- DNAJC1
- Assembly
- GCA_018290095.1
- Location
- CM031379.1:19960882-19980979[-]
Transcription Factor Domain
- TF Family
- MYB
- Domain
- Myb_DNA-binding domain
- PFAM
- PF00249
- TF Group
- Helix-turn-helix
- Description
- This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 3 3.8e+03 -1.9 1.8 6 15 226 235 221 238 0.82 2 3 0.00024 0.31 11.2 0.0 2 35 293 329 292 333 0.83 3 3 3.3e-13 4.1e-10 39.6 0.4 2 44 377 424 376 426 0.91
Sequence Information
- Coding Sequence
- ATGAGTTGtGCTTTTATATTCCTCACTCAAGTGATATTGCCAGCAAAAGCATGGGACAACGATGATCTTGAAATTTTCGATCTTGTAGAACTAGTCaatcagaatttttatgaaatgatgGGATTGAAACAAGATGCTTCATTatcagaaataaaaagagcCTTCCGTAATCTTTCGATTATCATGCATCCAGATAAAAATGATGCTCCTGATGccaatgaaaaatttcgaaatttagTTGCTGTCTATGAAGTGTTGAAAGATTCCACTAAACGTGAGAAATATGACAATGTTCTGAAAAATGGAATGCCTAATTGGCGATCAGCTGTTTATTATTATCGAAAAGCTCGTAAAATGGGACTTGCTGAGGGCGCGATTCTTCTATTTGTCATCACAACAATTTGCCAATATTTTGTTTCATGGGGTgtatatttagaaaaaaaatatacaatgGCATCAATATTTGAGTCAAAGGccaaaaaagtgagaaaagcTAATGTAAACATTGattcaatattaaatgaaattccaaaaccgagcataaaaaatactttgcCTTTCCAAATACCTATTGGTATTTATCGTATGATTATGGGAACACCGTCAGCCATTAAAGAATCTGTGAATTTTATGTCAGAAGAACTtaaaaaagaacttgaaaagaaaagactagaaaaagaagaggaagaGTTGCTTAAAAAATTAGAGGCTGAAAAGCAAAGAGAAAAagcagaaagaaaagaaggacTAAGAAAGCGAAAAGAGGAAGCTGCTAAATTAATGGAAAAGACAGATGAAGAGCTTGCCAGATATTCTGCAACAATTATCACAAGAAAACCTGGCtatgaagaaattaagaaaattccaCTCAGTGGTGGTCTGTGGACGGATGAGGATCTTAGTGAGTTAGCTCGCTTGACTAAAAAATATCCAGGAGGTACACAAGATCGATGGGAAATAATCGCAGAGACAATGAACAGAAATGTTAGTGAAGTCACATTTATGGCTTATAAGTTAAAAGATAATGCTTACACAGCTCCAGGTGAAACTGATAAACttgttcaaaatattaataaagaaCTTAGTAAAAAAACCAAAACTAAAGCGTCAGTTGAACAGTCATCAGAGAAAAATTGGACACAAGAACAACAAAAAGCGCTTGAAGCTGCTATCCAAAAATATCCCAAGAAAGGAAATGAAGATCGTTGGGCAAAAATTGCTAATAGTGTGCCAggaaaaacaaaagaagaatgtCAAGCACGTTATAAATATTTGGTTGATTtgttaaagaaacaaaaagaagcgaaagagagagaagaaaaggcTGTTCAAGAAGAGGAGGAAGTGGTTGAAAATGTAATAGATGAGCCTGAAGAAGAAGTCATAGAGCAAAAGCAAACTggtggaaaaaagaaaaacaaacgaaaagaaaagaaaaagaatatcgATTATTATGCTGATAGTTATTCAGATGAAGATGATGtcagtgaatga
- Protein Sequence
- MSCAFIFLTQVILPAKAWDNDDLEIFDLVELVNQNFYEMMGLKQDASLSEIKRAFRNLSIIMHPDKNDAPDANEKFRNLVAVYEVLKDSTKREKYDNVLKNGMPNWRSAVYYYRKARKMGLAEGAILLFVITTICQYFVSWGVYLEKKYTMASIFESKAKKVRKANVNIDSILNEIPKPSIKNTLPFQIPIGIYRMIMGTPSAIKESVNFMSEELKKELEKKRLEKEEEELLKKLEAEKQREKAERKEGLRKRKEEAAKLMEKTDEELARYSATIITRKPGYEEIKKIPLSGGLWTDEDLSELARLTKKYPGGTQDRWEIIAETMNRNVSEVTFMAYKLKDNAYTAPGETDKLVQNINKELSKKTKTKASVEQSSEKNWTQEQQKALEAAIQKYPKKGNEDRWAKIANSVPGKTKEECQARYKYLVDLLKKQKEAKEREEKAVQEEEEVVENVIDEPEEEVIEQKQTGGKKKNKRKEKKKNIDYYADSYSDEDDVSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01249041;
- 90% Identity
- iTF_01249041;
- 80% Identity
- -