Basic Information

Gene Symbol
fcf2
Assembly
GCA_018290095.1
Location
CM031379.1:8874055-8877931[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 6 0.34 4.2e+02 1.1 0.1 3 17 441 455 439 457 0.89
2 6 1.6 2e+03 -1.0 0.1 22 46 518 544 501 544 0.81
3 6 4.2e-08 5.3e-05 23.2 0.0 1 37 550 587 550 594 0.93
4 6 7.3e-12 9.2e-09 35.3 0.5 3 43 605 649 605 651 0.96
5 6 5.4e-12 6.8e-09 35.7 0.0 1 44 660 704 660 706 0.95
6 6 4.8e-13 6e-10 39.1 0.3 2 44 713 756 712 758 0.95

Sequence Information

Coding Sequence
ATGGAAGCAGAACATAATTTATTTGTCGTTGATACAGCGCCAAATGAAGAACAAAATAGTGTAGATTTGATTCAGAGTTTATTCCCATTGTTCACAAGTTCAAAATTCACTCTATTAGCAAatgatgaaagtgaaaaagaaaagaattattttgGCTTACCATCACCATcaataaagataaaagaagCCCTTAAGAAGTGCCCAATTCaagcaaattattttaaaaatgaaaaggaatCTGATTTGAAGAAAACCGGTAGCAAGTTTAAAGACAAACTTTTATCTTCACTCGATAATTATTTAGATGAACTGcgcattcaaaatttaaatcaaaccAGCTTCATAACAGACGGGATTGAATCAATGAACGATATATCAAAGCTAGGAATGTCAGAAAATCAActtaagaaattgaaaagaaaGGAACGTGAAAGAACAAAAGGTTCTAAATGGTTTAACATGAAGGCACCTGAAATGAATGAAGGACTCAAAAATGAATTGGAAATTCTTCAAATGCGGTCTGCTCTAGATCCAAAACATTTCTACAAACGTAGTGAAATGAAGACTcttccaaaatattttgaaatgGGAAAAATAATCGAGTCTTCTGTTGAGTATCACAATTCGAAAAACATTcgtaaaagaaacaaaacacTAGTTGATGAATTGATGGAAGATgcagaatttcaaaaattaaataaaaagaaattcaaggaAGCTGAAATGCAAGACAAGAaagaacaaatttcaaaaattattattgatgtTGAACGACTTATTGAACCAGATGACATAACGATTGAAGAAACACCGTTATTGCAAGAAGTTAAAAGAgtacaaaatcaaaaaaatgcaattgtcAATAAATGTTTTGAAGAAACTAATAATTTCGAGGATAATTTTGAAGCATATTTCAATGAATCGAAAAGAAAACGAAATAATATAGAGattccagatttaattgattataatcaaattttctgtACGGAAACAGatgcaaaaagtttaaatatcaAGCCAAATGCACAACATGTAGTTACAATAAATAACGaattaaagtttcaattgattaaatttcgcAAAAGTCTTGaagaaatcaaatcaaatttggATGACCGATTGAATATATTAGAGCAGTATTTAGAAGATATAAAACATATTGATAAAGATTcggcaattttaaaaacaacataTGTAAAATGTGGGGCTCCTTTCTTTAAAGATGCACTTTGTTATCCTGCTCCggaaaatgaagattttaaacACCGTAAAAATGTCCTAAAAGAGTATTTTCCTTTCGATGTTTCAAACAAATCATCATCATGggaaaatgaagagaaaacgCAATTACTTGAAGGcatcaaaaatcaaatgatcAACTATATTCAGTCTcaacaatcaaaaaaagtgTGTCAAGATACAAAGAAAACCAGAggcaaaatgaagaaaattaaatttatattcactAGTAAAGATTTGCAAGAAACACCAATGTTAAAATTGTACGAAATGATTCAAAATGAATATTCTGATTTTTGGTTTAATGGTATCAACTGGAatcttatttcatttaattctctTGAAGGCAAACATACCGTGTCTGAATGTATGGGAATGTGGCACAGTTATTTGAGACCTGATATAAATCGAGAGCCATTCACAGATGAAGAAAATGCTATATTGGCTCATGCCGTTATTGAGAATAAGCATCAAAATTGGAATTTAATAGCAAATCAGCTTGAGAATCGCACAAGCCTTCAAACATTTGTTCATTACAATTCTGAGCGTTCTCGCTTATGCCCGCCAAATATTCGATGGACTACAGAAGAAGATCAAAAATTACTTGATGCAGTAAAAAAACATACACGAGGCAAAGATATTTTATGGCATAATATTGGTACTGCAATTGAAAATCGAAATAAAACTCAATGTTACAATcgttatttaatattaatgcGCCAAAGAGACTCACAACAAAAGGGTGTTTTTAAGCCACATGAAGATAGAATATTATTAGATTTTGTGGCCAAACATGGAACTGATTTTAGTAAAATGGATCCTAATCTTTTGCCTAATCGATCAATTgttcaaatcaaaaatcattataaTGTAGCATTAAAACATAAAGGAAAAGTAAATCCATGGACTCGAGAAGAAGATCAGAAGTTATTGGATTTTGTCAAAGAGGAAGGAACAAATAGTTGGTATAAAATTGCTGAAATTCTAAAGACTCATAATCGTTTATCATGTCGGACACGATATACAacaattcaaaagtttttgaagaaGAATCCtgataaaacttttgttgACGCTCCATCACGTTTAAAGACTGTCACAGCTGTTCATAGAGCTATTCAAAGTGATGATGAGGAAATTAGTGATGATGACTCTCaggaaataaaaaacacaTATCGTCCATCAAAATCTTTTGGCATGCTCTCTTTTGAGGAATTTAAGATTAGAAATATTCAACTGTACAgtttaatgaaaacaaattataaCTATCGGCTAATTGTTCGTGAACTCAACATTGATGCTGCTAAATTTGTATCAATGAAACAACTTCTTGATATCGATGATTCAGCTATGAAGAATAAATCTCTTTTTATATTGACAAAAGATCAGCATCAAAAGTTGAAAGaagttctttcttttcaactgAGTCAAGAATTTGTTAAAGAAATCAATAACATAcgacaaaattataatttttatctacCACCTAATTATAATACATCGATTGGCCTGCGAGCAAtaagaattaaattgaatgaagaaGCAGTTTTACCAAAAATAATAGACGAAaagtcaaatgaaaataagcaAGCACTTGAACGTtttcaaaagttattttattcacttttctaTTGGCCTGCAATGATATCTAAAATGCGTGAATCAGAACTTCGTAGTAATTATCTCATTCGTGATTCTACAAATAAtacattcaaaattataaatgtatCGCAAGATGAACcttcaatcaaaaaacttaACAACACTGTTTTGTCAAAAAGAAAGCAAGTGGAcgaataa
Protein Sequence
MEAEHNLFVVDTAPNEEQNSVDLIQSLFPLFTSSKFTLLANDESEKEKNYFGLPSPSIKIKEALKKCPIQANYFKNEKESDLKKTGSKFKDKLLSSLDNYLDELRIQNLNQTSFITDGIESMNDISKLGMSENQLKKLKRKERERTKGSKWFNMKAPEMNEGLKNELEILQMRSALDPKHFYKRSEMKTLPKYFEMGKIIESSVEYHNSKNIRKRNKTLVDELMEDAEFQKLNKKKFKEAEMQDKKEQISKIIIDVERLIEPDDITIEETPLLQEVKRVQNQKNAIVNKCFEETNNFEDNFEAYFNESKRKRNNIEIPDLIDYNQIFCTETDAKSLNIKPNAQHVVTINNELKFQLIKFRKSLEEIKSNLDDRLNILEQYLEDIKHIDKDSAILKTTYVKCGAPFFKDALCYPAPENEDFKHRKNVLKEYFPFDVSNKSSSWENEEKTQLLEGIKNQMINYIQSQQSKKVCQDTKKTRGKMKKIKFIFTSKDLQETPMLKLYEMIQNEYSDFWFNGINWNLISFNSLEGKHTVSECMGMWHSYLRPDINREPFTDEENAILAHAVIENKHQNWNLIANQLENRTSLQTFVHYNSERSRLCPPNIRWTTEEDQKLLDAVKKHTRGKDILWHNIGTAIENRNKTQCYNRYLILMRQRDSQQKGVFKPHEDRILLDFVAKHGTDFSKMDPNLLPNRSIVQIKNHYNVALKHKGKVNPWTREEDQKLLDFVKEEGTNSWYKIAEILKTHNRLSCRTRYTTIQKFLKKNPDKTFVDAPSRLKTVTAVHRAIQSDDEEISDDDSQEIKNTYRPSKSFGMLSFEEFKIRNIQLYSLMKTNYNYRLIVRELNIDAAKFVSMKQLLDIDDSAMKNKSLFILTKDQHQKLKEVLSFQLSQEFVKEINNIRQNYNFYLPPNYNTSIGLRAIRIKLNEEAVLPKIIDEKSNENKQALERFQKLFYSLFYWPAMISKMRESELRSNYLIRDSTNNTFKIINVSQDEPSIKKLNNTVLSKRKQVDE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
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