Pvan014582.1
Basic Information
- Insect
- Polypedilum vanderplanki
- Gene Symbol
- kn
- Assembly
- GCA_018290095.1
- Location
- CM031382.1:10921828-10940334[-]
Transcription Factor Domain
- TF Family
- COE
- Domain
- COE domain
- PFAM
- AnimalTFDB
- TF Group
- Helix-turn-helix
- Description
- This is the helix-loop-helix domain of transcription factor COE. It is responsible for dimerisation [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 3 1.1e-24 2e-20 72.6 0.1 205 251 1 47 1 61 0.93 2 3 8.4e-230 1.5e-225 750.0 0.0 11 385 116 506 108 510 0.97 3 3 8.9e-07 0.016 13.5 12.9 423 508 512 600 505 611 0.75
Sequence Information
- Coding Sequence
- ATGAGAAGATTTcagGTTGTAGTTTCAACTCAAGTGAGTGTCGATGGACCACTTCTAGCGATTTCTGATAACATGTTTGTACACAATAACAGTAAACATGGAAGACGTGCAAAAAGAATGGATCCAGATGGTGCCGCTGCTGCTGGTAATTCCCCGTTGTTATCAGCTCATGCATTGGCTCCGGACAACGAGCCAGTGCCGGGCTTTAGCTCGGCATCTCCATGGCCAACTTTAGAGTTGGAATGGGGTAGAAAGCTCTATCCAACGACTGGCACACGAGGAAGTGGTTTAATGTTTGGTCTTCCACCCGGCAGTGATCTCAATCAGCCACGTGGTCCTGTCACAAGCCTCAAAGAGGAACCACTTGGTGCCAGAGCTTGGATGCAACAACCAGACCAAAGCAATCTTGGAATTGGACGAGCACATTTTGAAAAGCAACCACCATCAAATTTAaggaaatcaaatttctttcactttgTTATTGCACTTTATGACCGAAATGGACAACCAATTGAAATTGAACGAACGGCGTTCATtggatttattgaaaaagatcagGAAATTGATGGACAGAAGACCAATAACGGAATTCAATATCGATTGCAGTTGTTATATACAAATGgtGCACGACAAGAACAAGATATTTTTGTGAGGCTTATTGATTCAGTTACCAAAGcggcAATAATGTATGAAGGCCAAGATAAAAATCCAGAAATGTGTCGAGTGTTATTGACTCATGAAATTATGTGTAGTCGGTGttgtgacaaaaaaagttgtgGCAATCGTAATGAAACACCTTCTGATCCTGTTATTATTGATAGaTTTTTCTTGAAGTTCTTCTTAAAGTGCAatcaaaattgtttgaaaaacgCTGGAAATCCGAGAGATATGAGAAGATTTcaggTCGTAGTTTCAACTCAAGTGAGTGTCGATGGACCACTTCTAGCGATTTCTGATAACATGTTTGTACACAATAACAGTAAACATGGAAGACGTGCAAAAAGAATGGATCCAGATGGTGCCGCTGCTGCTGGTAATTCCCCGTTGTTATCAGCTCATGCATTGGCTCCGGACAGTACGTACGACGGCATTTATCCACCTTTACCAATGGCAACACCATGTATCAAAGCAGTTTCACCATCAGAAGGTTGGACCAAAGGTGGCGATTCTGTCATAATTATTGGTGACAACTTTTTTGATGGTCTGCAAGTCATTTTTGGAACAATGCTTGTATGGAGTGAACTGATTACATCACATGCAATTAGAGTTCATACACCACCACGACATATTCCCGGAGTAGTTGAAGTCACATTGAGTTataaaagtaaacaattttGCAAAGGATCACCTGGACgatttgtttatatttctCTAAGTGAGCCAACAATTGATTATGGCTTTCAACgattacaaaaattgattcCACGACATCCAGGTGATCCTGATAAATTGCCAAAAGAAATAATTCTCAAGCGAGCAGCTGACATTGCAGAAGCACTTTATTCAATGCCACGATCACCATCAGGTGGTTCCAGTTCAGGTTTCAATTCGTATACGGGTCAGCTAGCAGTGAGCGTTCAACCCGATGGAAGTCAATGGACTGATGCTGGAGATGAATACAATCGAACACAAAGCAGCAGTGTTAGTCCGCGTGGTGGTGGTGGTTATTGTTCAAGTGCATCGACACCACATTCATCAACTGGTGGCTCTGCATCATATGGTACAACATCACTGACTAATGGCTATGGACCACCAGCACCTATTCAAATGACTGGATTGTCCACAACATCACCAGCATCATCTGCTAATGTTTTTAATTCTACATCAAtttattaccgttaa
- Protein Sequence
- MRRFQVVVSTQVSVDGPLLAISDNMFVHNNSKHGRRAKRMDPDGAAAAGNSPLLSAHALAPDNEPVPGFSSASPWPTLELEWGRKLYPTTGTRGSGLMFGLPPGSDLNQPRGPVTSLKEEPLGARAWMQQPDQSNLGIGRAHFEKQPPSNLRKSNFFHFVIALYDRNGQPIEIERTAFIGFIEKDQEIDGQKTNNGIQYRLQLLYTNGARQEQDIFVRLIDSVTKAAIMYEGQDKNPEMCRVLLTHEIMCSRCCDKKSCGNRNETPSDPVIIDRFFLKFFLKCNQNCLKNAGNPRDMRRFQVVVSTQVSVDGPLLAISDNMFVHNNSKHGRRAKRMDPDGAAAAGNSPLLSAHALAPDSTYDGIYPPLPMATPCIKAVSPSEGWTKGGDSVIIIGDNFFDGLQVIFGTMLVWSELITSHAIRVHTPPRHIPGVVEVTLSYKSKQFCKGSPGRFVYISLSEPTIDYGFQRLQKLIPRHPGDPDKLPKEIILKRAADIAEALYSMPRSPSGGSSSGFNSYTGQLAVSVQPDGSQWTDAGDEYNRTQSSSVSPRGGGGYCSSASTPHSSTGGSASYGTTSLTNGYGPPAPIQMTGLSTTSPASSANVFNSTSIYYR
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00320381;
- 90% Identity
- iTF_01352400;
- 80% Identity
- -