Basic Information

Gene Symbol
JARID2
Assembly
GCA_018290095.1
Location
CM031380.1:20789399-20795335[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 7.4e-22 1.9e-18 66.6 0.0 7 89 1306 1386 1302 1386 0.93

Sequence Information

Coding Sequence
ATGGTGGTCTCAAAACGTAAAAAGGATAATAAGGAAGTAGCATCAGCAACGCCTGAATTAAAAAGaacgAAAATTCAAGCACAGAGAAAGTTTGCTCAAGGTCAAAATCCACCATCGTCTGCATATCTCACCTATAATTTAACAGCTGGAAATGAGACTCCACAGCGAGAAAAATCACCAGAAAGAGAACTTCTTCCAAATTTGCGACCCAATACTGAAGATTTTTTAACATTCTTGTGTTTTCGTGGCACAAGTTCGTTACCAAAAGAACTTGATTTTACCAATTCTCTCAATCAGCCTTCTACAAGTGGAGCATCAACGAGTTCAAAAGCAACTCCTGACAAAAAGAAACAggataaaaatgaatcaaataagaaaaaatctgTTAGTGTAAAAAAGAATGAGGAAGTGCTATCAACGCCACAAATTAAAGAAACCGAAAAGGAAACTAAACATCCACCACCTCCACTAATCACAGAAAAAGATCCTAAAACTGGTTTTATGCCATTTGCAGTTAGGAAAAGAGCTGAAGTGCATCCagtaaaaaatgataagaaaaaattgcaacCAAATGCTAATAAAAAGAACAGCAATAACAATAAGCAGCAGCAATCTCAAAAATCTGATGTTACTGAAAAAGATTTATCATCAAATGGACCACGTACAACAAGATCAACTCCTTTAGAAGAGAAACCACAACAAAATCATGAtgattcaaaaacaaaaaataataaaagaaaatcacaaaatgatGAAGAGCATAACGAAAGTGTCACATcaacttcatttaaaaatattaagcttGATAAATCGCCACGAATTGAACTAACTCCAATAGAAAAAGTGCCAATTGAAACAGTAAAGAAAGATTCTAAAACTAATAATAatcaagtaaagaaaaaatcacccattaataaaaaagaagatgacAAACGACAGACAAGACTTTCTTCACTCAAAAATCCAGCCTCATCGACACCAAAagatgagatgaaaaatggaaaacaaacgccagaattaaaaaaatatttctcctCATCAGAAGATGACGATGAACCGTTAGTTAAAATAGAGCccaaaaataagaaacaaaaagtgcaaaatgaaagcaaaaaaattgacgtGGAGAAAATTGAAACGACCATTAAAAATAACTCAATCAATAATAAGTCACAGCAAAATGATACACAAAATTCAAGCTTGAAATCAATAAGAGGGCGCAAGAAAAAAGCTGCTTCTgtggaaaaagagaaaactcCTGAGCCAGAAAAATCAAAGGTACAAGAACCAATGTTTGATGACTCtgctgaaaagaaaaaagttggaaggaaaaaaaaattattaattgaaaatgaaaaggcAAATTCTCAAGCAAATACAACGGATTTGAGTGAAAATGAGACACGAGGTAGACCTATGCGAAAAACGAAAGAAGCCGCCACAATTTATATGGAGCTTATAGGAAGAAAATTGACCTTACATGACTCTTCTGATAATGATTCTTCACTAGATAGTCTCGAAGTTCCGAATCTCAAAAGAGTAGAATTTTTggagaatgaaatgaaagcaggaattgaaaaagaaaaagcagaaaagaagaaagccgaggaaaaggaaaagaagGCACAAGAGGCCAAAAAATCTAACAATTCAACATCTCAAGATAGGCAAGATTCAAAAAACACGAAAGGAAAACGCGGAGCAACCAGAGAAGAAGAACataagaaggaagaaaagaaaaatgttacaaACGAAAAGTCTGGTGATGAAACTAAACTAGAAAAGAGCTTTAGTGATTCAGATGAAGAACCACTTGCTACAAAAATGGCAAAACAATCTTCTAAACCTACACCGAAAAAGCGTGGTAGGAAAAGTCATCAAGAACTTGCTGAAATGGCAAGAAAAGCAGAAGAGCAACGACAAGCTGAAATGTTAAAACAGCaaataaagaaactttctGCGTCACCAAAATCCGAAGAAAATGTCATATCAGTGGTACCACAACAAAACCTTCTGTTGTCTGCTAAAACAATAAATGCAAATTCAAGTCAAATACAATCTAATAACGTTAAATCTCCAAACACATcacaaaatgataataaaattcaaaaggaTTCAGCAATTGTCAAGAGTgcatttgatgaaattaaaagcacACCTTCTGTAAAGGTAAAATCACCAGAAACTTTAAACAAGTCTCATGAGGTCAAAGCAGAAGatgaaattatgaatgatgatgactttttcgtaaagaaatttgattcatCGACAGCAAAGCctgcatcatcatcaaaaccATCAATCAATCTTTTACCAAGCAAAGAGGAATCTGAAAAGATTTTCGGAATAGCAAGCGTAACTCTTGCACAGAGTAGTGGACCATTAGATACAAAATGCACTTTAGGAAAATGTGGATCTATACATAAACCACCACTTGGTCCTGCAGTGCTCACTGAATCAGCATTAGGTGCAAGTCTTTCTCCAAAAGATCGTCGTAAGAGCAAAGTTAACATGACACGAGAGCAAATACAAAAATGGCTCGATGAAGCTTCATGGACACCGATTCCAGATGATGAAATGGATTCAATAGATTTGAAAACAGCATCAACATCAAGTGCTGTTCTCTCTAAATCAGGAGATGACTCTCAGTCTTCCAATCAAACTAAGGATAAAATAGTCACTGATCAGTCGACAACTAATTTTAAAGACCTCACACCAAAATCCAAATCAGAATCATCTCCACAGAAATCTACTGCTTCTAAAGTTGAACAAAAAACGAAGAGTCCAAcacttttgaaaattgatgaagtaCAGCAAAAgaaacagcaacaacaagaaCTTTTGAACATTTCATTTGATTCTAAAGCATCAAGCTCAACGCCAGCagtgaacaataaaaaaactcCAGTATATCAACaacatcaacagcagcaacaacgtCGAACGCCAGTGTATAAAGCCGTTGATAACAAAACGACTGCAAAATCAAAGTTAACACCCGTATTGCAAAGCAGTTTTGGTGCCTTTTCACCTGAAAATGAACATAGTATTTACTCATTTGACCGTGAGGATGATGATTTTCCTACACCTACAACACCATTCCGAAGCAATTCAAAAACCGATGATAGAAAAGATGAGCCCAAATTAGTTACACCGACAAAGCAATCAACCACACAGCCTTCTCATGTATCACTCACTCTTAGTcctgatgataataaaaagtcGGCATCAATTAGTGTTGAAATGACGGATGATAAAAAGAACAGTTCAAATAGCATTGCAAAACCTGATCAAGAAAAAGATGCTGATGATTCTGATTCTGAGGGTCACACATTTTACATTCCCTTACAAGCATCAAATGTTTCTGGTAGTAAAACGATTCAAGGAGTTGCTGTTAAGCTAGGAACAGAGGGATCCGAAGGTCCAAATCAGAGAATAATTATGCATGCAAAACTCGTAACAAAGTCTCGGATTAATGCAACACCATTACCTGAATCAATGACTAATGTTCAAGAACTGGTGAAAACTTTAATGGCCAACAAAGAAACTTCTAAACCAGTTCAACCAGTGCAACCTCGATTTAAATCAAATGATGGAACTGAAGTAAGTACATCTCTTCAGCCAGAGCCAAGTACGTCAAGTTTAGTTGCCAATCAAAGAACCAAACAACAAGCTCCCAAGTTAGGAGTAATGACTGAAGCACCAATATTTAGACCAACTGAAAAAGAATTCCAAGATCCAATTGAATATATTGAACGCATTACACCACTTGCACAGCGATTTGGAATTTGTAGAATCATTCCACCATCAAGTTTCAAACCAGAATGTCGAGTGAGCGATGAAATGCGGTTTACAGCTTATAATCAATATGTACACAAAATGCTTCATCGTTGGGGACCatcaatgaaagaattttcagcaattaaaaagtatttgGCAACACAGAGCATTCAGTTGCAGCGACCACCATTAATTGCAGGCATTGAAGTCGATTTACCACGTTTATATCATACTGTACAAGAACTTGGTGGCTTAAAAGAAGTcattgagaagaaaaagtggGCAAAAGTTGCTGAAGATATGTGCATACCAAAATCTGCACATGACCGCATCACAAAACTTGATGACatttattgcaaatatttACTGCCCTATGACACACTTTCACCAAATGAACGTCAGAAATTGTTTGATGAAGTTGAGGCTGATTGGGCAAAACGTGAGGCAAAGGCACGTCGTAATGCAGATAAAGGTGTAGAATCGGATGAACAAAATTCAGAGGATGAGGATGaggatgatgaagatgaagaagaggaAGATGACAATTCATCGATGGAATGTATGGTGAAAGGCCGAAGTATGGCACTAAGTCAATTTTATCGTATTGCAAGAAATATGGTAACTCTTTGGTTCAAAACACCTGAACCAACAAATGCAGAGATTGAAACAGAATATTGGCGTCACGTGGCTGTTCGTGACAGTCACGTGTGCGTACATTATGGCTCAATTGATTCAAGTGGTTATGGCTATGGTTTTCCTACTCCTGGACCAAAAACAAAACTGTCACCGTGTGCGAAACATCCATGGAATTTAAAAGTGTTGACAAATAATTGTGGCTCAATATTGAGATCACTTGGACCAGTAATGGGAGTAACAGTTCCTACACTACATGTTGGCATGCTCTTCAGTGCAGTCTGTTGGTATCGAGATCCACATGGTCTGCCTTGGATTGAATATCTTCATACAGGCGCTAGTAAAATTTGGTATGCAGTGCCAGACGAACAAAGTGCGAATTTTCGTGCAGCGCTTACATCATTAGTTCCTTCACATTGTCAAAACAAGACGATATGGCTGCCATGTGATACAGCTATGGTTCCTCCATATATGCTCACAGATAGAAATGTTTCATTATGCCGCACAGAGCAACAACCGGGACAATTTGTTGTCGTTTTCCCAAGAGCTTATACATCGAGTGTGTGTACAGGTTATACAGTATCTGAAAGTGTATATTTCGCCACTCACAGTTGGCTTGATACTGCGCATCTTGATTTTAAAgATATTCAAGAGAGCTGTGAACCAACAATGTTTTCGCTCGAACAGTTGCTATTTGCAATTGCTAATGATCAGAGAAGCAAAGATgagacaataaaaaagattttaccAATGTTGAAAGATGCATCGGATGCTGAAAAGATTAATCGTCAGGCATTAAAAgACGCTGGTGTAAATGCAACAGAGAAAATTcatgaagtgaaaaataaagttaatgCCGAAGAATTGGAATGTAACTATTGTCGTGCAAATTTACATATCTCTTGGATTAAGTtggaagatgaagaagaggaGGGTGATGAAAATAATGTTTACTGCTTGAAGCAtgctttaaaatatataaaagataATCGCATTCAAGCTGGGCAGTGTAAATTACTGTACACATATACGATGGATGAGATTGAGAAACTTATTAAACGACTAAAAACAAGAGTCACTGAAGATGAAACAACAACTGCCACCGTCGGTCAATCATCATCAACTCATGATTCGCAACGCAAAAATAAATCCAATCAGAAAACTAAATCAACAGGTAAATAA
Protein Sequence
MVVSKRKKDNKEVASATPELKRTKIQAQRKFAQGQNPPSSAYLTYNLTAGNETPQREKSPERELLPNLRPNTEDFLTFLCFRGTSSLPKELDFTNSLNQPSTSGASTSSKATPDKKKQDKNESNKKKSVSVKKNEEVLSTPQIKETEKETKHPPPPLITEKDPKTGFMPFAVRKRAEVHPVKNDKKKLQPNANKKNSNNNKQQQSQKSDVTEKDLSSNGPRTTRSTPLEEKPQQNHDDSKTKNNKRKSQNDEEHNESVTSTSFKNIKLDKSPRIELTPIEKVPIETVKKDSKTNNNQVKKKSPINKKEDDKRQTRLSSLKNPASSTPKDEMKNGKQTPELKKYFSSSEDDDEPLVKIEPKNKKQKVQNESKKIDVEKIETTIKNNSINNKSQQNDTQNSSLKSIRGRKKKAASVEKEKTPEPEKSKVQEPMFDDSAEKKKVGRKKKLLIENEKANSQANTTDLSENETRGRPMRKTKEAATIYMELIGRKLTLHDSSDNDSSLDSLEVPNLKRVEFLENEMKAGIEKEKAEKKKAEEKEKKAQEAKKSNNSTSQDRQDSKNTKGKRGATREEEHKKEEKKNVTNEKSGDETKLEKSFSDSDEEPLATKMAKQSSKPTPKKRGRKSHQELAEMARKAEEQRQAEMLKQQIKKLSASPKSEENVISVVPQQNLLLSAKTINANSSQIQSNNVKSPNTSQNDNKIQKDSAIVKSAFDEIKSTPSVKVKSPETLNKSHEVKAEDEIMNDDDFFVKKFDSSTAKPASSSKPSINLLPSKEESEKIFGIASVTLAQSSGPLDTKCTLGKCGSIHKPPLGPAVLTESALGASLSPKDRRKSKVNMTREQIQKWLDEASWTPIPDDEMDSIDLKTASTSSAVLSKSGDDSQSSNQTKDKIVTDQSTTNFKDLTPKSKSESSPQKSTASKVEQKTKSPTLLKIDEVQQKKQQQQELLNISFDSKASSSTPAVNNKKTPVYQQHQQQQQRRTPVYKAVDNKTTAKSKLTPVLQSSFGAFSPENEHSIYSFDREDDDFPTPTTPFRSNSKTDDRKDEPKLVTPTKQSTTQPSHVSLTLSPDDNKKSASISVEMTDDKKNSSNSIAKPDQEKDADDSDSEGHTFYIPLQASNVSGSKTIQGVAVKLGTEGSEGPNQRIIMHAKLVTKSRINATPLPESMTNVQELVKTLMANKETSKPVQPVQPRFKSNDGTEVSTSLQPEPSTSSLVANQRTKQQAPKLGVMTEAPIFRPTEKEFQDPIEYIERITPLAQRFGICRIIPPSSFKPECRVSDEMRFTAYNQYVHKMLHRWGPSMKEFSAIKKYLATQSIQLQRPPLIAGIEVDLPRLYHTVQELGGLKEVIEKKKWAKVAEDMCIPKSAHDRITKLDDIYCKYLLPYDTLSPNERQKLFDEVEADWAKREAKARRNADKGVESDEQNSEDEDEDDEDEEEEDDNSSMECMVKGRSMALSQFYRIARNMVTLWFKTPEPTNAEIETEYWRHVAVRDSHVCVHYGSIDSSGYGYGFPTPGPKTKLSPCAKHPWNLKVLTNNCGSILRSLGPVMGVTVPTLHVGMLFSAVCWYRDPHGLPWIEYLHTGASKIWYAVPDEQSANFRAALTSLVPSHCQNKTIWLPCDTAMVPPYMLTDRNVSLCRTEQQPGQFVVVFPRAYTSSVCTGYTVSESVYFATHSWLDTAHLDFKDIQESCEPTMFSLEQLLFAIANDQRSKDETIKKILPMLKDASDAEKINRQALKDAGVNATEKIHEVKNKVNAEELECNYCRANLHISWIKLEDEEEEGDENNVYCLKHALKYIKDNRIQAGQCKLLYTYTMDEIEKLIKRLKTRVTEDETTTATVGQSSSTHDSQRKNKSNQKTKSTGK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01248885;
90% Identity
iTF_01248885;
80% Identity
-