Pvan016669.1
Basic Information
- Insect
- Polypedilum vanderplanki
- Gene Symbol
- Jra
- Assembly
- GCA_018290095.1
- Location
- CM031382.1:9304441-9307346[-]
Transcription Factor Domain
- TF Family
- TF_bZIP
- Domain
- bZIP domain
- PFAM
- AnimalTFDB
- TF Group
- Basic Domians group
- Description
- bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.7e-15 1.2e-12 47.6 8.3 2 65 175 238 174 238 0.96
Sequence Information
- Coding Sequence
- atgagaaaCTTACGAGGAAGTGATCAATCTAAGCCCGTCgataataattcaaatatgaTGAAAAGACCATTAACACTagatttaaataagaaaataaacacTGCAGGCGGAAGTCAGCTGTTATTGACAACTCCTGATGTAGAAAAAATGGTGATAAAAAGTCcagaattagaaaattttattcttaatgcTGACACACTTCAAACACCTGGACAAATACTTCCAACTCCTTCAACTTCTGCTGCCTTTGCTCCTAaaatAACACAAGAACAAGAAATGTATGCAAAAGGCTTTGAAGAAGCgctcaataaaataaaaactcaacAAGAAGGAACAGTTTCAGTCCCAGTTCCACAACAGTCAATAACAAAGCCAACACCTAGTATGAGTGGAGGTGGAATCAATTACAGCGAATCAGAcagttcaaatttaattattcaacaaattaaagaagaaCCTCAACAACCACCAAGTCCACAACAAGAACAAAGTTTAAATCCTATTGACATGGAATCAcaagaaagaattaaattgGAAAGAAAAAGACAGAGAAATCGTGTTGCTGCTTCAAAATGTAGAAAACGAAAACTTGaGAGAATTTCAAAACTTGAAGATCGCGTAAAAGTCCTCAAAGTAGAAAACCATGAACTTGGTGCAGTTTTAGTGAACCTTAAGCAACATGTTTTTGACCTTAAACAACAAGTTATTGaacatcatcaaaattatGGTTGTAAAATTACACTAAAAAACTGA
- Protein Sequence
- MRNLRGSDQSKPVDNNSNMMKRPLTLDLNKKINTAGGSQLLLTTPDVEKMVIKSPELENFILNADTLQTPGQILPTPSTSAAFAPKITQEQEMYAKGFEEALNKIKTQQEGTVSVPVPQQSITKPTPSMSGGGINYSESDSSNLIIQQIKEEPQQPPSPQQEQSLNPIDMESQERIKLERKRQRNRVAASKCRKRKLERISKLEDRVKVLKVENHELGAVLVNLKQHVFDLKQQVIEHHQNYGCKITLKN
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01248836;
- 90% Identity
- iTF_01248836;
- 80% Identity
- -