Basic Information

Insect: Polypedilum pembai
Gene Symbol: -
Assembly: GCA_014622435.1
Location: JACWBX010004595.1:59389-64876[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.0019 0.089 13.3 0.9 1 23 993 1016 993 1016 0.95

2 16 0.0053 0.24 11.9 1.3 1 23 1132 1154 1132 1154 0.97

3 16 0.0076 0.35 11.4 3.7 2 23 1157 1178 1157 1178 0.97

4 16 0.0032 0.15 12.5 1.4 1 23 1184 1206 1184 1206 0.96

5 16 5.6e-05 0.0026 18.1 1.4 2 23 1213 1235 1212 1235 0.95

6 16 0.011 0.5 10.9 0.1 5 23 1248 1266 1246 1266 0.97

7 16 4e-05 0.0018 18.6 2.6 2 23 1272 1294 1271 1294 0.95

8 16 0.18 8.2 7.1 0.3 3 23 1308 1327 1306 1327 0.96

9 16 0.00024 0.011 16.1 3.4 1 20 1334 1353 1334 1356 0.92

10 16 0.00082 0.038 14.4 0.3 1 23 1364 1386 1364 1386 0.98

11 16 0.18 8.2 7.1 0.3 3 23 1414 1433 1412 1433 0.96

12 16 0.00024 0.011 16.1 3.4 1 20 1440 1459 1440 1462 0.92

13 16 0.00082 0.038 14.4 0.3 1 23 1470 1492 1470 1492 0.98

14 16 1.2e-05 0.00056 20.2 2.3 1 23 1498 1520 1498 1520 0.97

15 16 0.00014 0.0067 16.8 3.7 1 23 1526 1548 1526 1548 0.98

16 16 0.0035 0.16 12.4 4.6 1 23 1554 1576 1554 1577 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.0019	0.089	13.3	0.9	1	23	993	1016	993	1016	0.95
2	16	0.0053	0.24	11.9	1.3	1	23	1132	1154	1132	1154	0.97
3	16	0.0076	0.35	11.4	3.7	2	23	1157	1178	1157	1178	0.97
4	16	0.0032	0.15	12.5	1.4	1	23	1184	1206	1184	1206	0.96
5	16	5.6e-05	0.0026	18.1	1.4	2	23	1213	1235	1212	1235	0.95
6	16	0.011	0.5	10.9	0.1	5	23	1248	1266	1246	1266	0.97
7	16	4e-05	0.0018	18.6	2.6	2	23	1272	1294	1271	1294	0.95
8	16	0.18	8.2	7.1	0.3	3	23	1308	1327	1306	1327	0.96
9	16	0.00024	0.011	16.1	3.4	1	20	1334	1353	1334	1356	0.92
10	16	0.00082	0.038	14.4	0.3	1	23	1364	1386	1364	1386	0.98
11	16	0.18	8.2	7.1	0.3	3	23	1414	1433	1412	1433	0.96
12	16	0.00024	0.011	16.1	3.4	1	20	1440	1459	1440	1462	0.92
13	16	0.00082	0.038	14.4	0.3	1	23	1470	1492	1470	1492	0.98
14	16	1.2e-05	0.00056	20.2	2.3	1	23	1498	1520	1498	1520	0.97
15	16	0.00014	0.0067	16.8	3.7	1	23	1526	1548	1526	1548	0.98
16	16	0.0035	0.16	12.4	4.6	1	23	1554	1576	1554	1577	0.96

Sequence Information

Coding Sequence: ATGGAGCAACAACAATGTCCAATTTGTATGCTTTATTTGCTGCCTGGAATGAATCTTCAAGATCATTTAGATACGCATCCCAAGGATATGATAATCAAAGCACTATTGTCGGTCAAAACAACAGAACAGCTTCAGCAACCTCAAAAACCTACACCCGTGAGTGTTGCGTCGAATGAGATGGCAACAGTTTTTCTCACGACTACACCATTTAACTCATCACAAACCCACATATATCAACAGACACCATCACAACAGCAGCAAAATACATCAACCTATGCCGTTGCGAAACGTAATTCTGGCAATAGCAATCTCCTACTTGGTAATCGACCGTATCGATTAACACTTGACGCTGCTTCACAGGCTCTCTCATCTTCGCCCTCAACTAGTGCCACGACCTTCCTCAATGCATCTTCATCAGCTGTAGCGCCCCACAATAACAATAATAGTAATAGTAGTAGTAGTTACGGAAGACGAATGACATCACAGGCAAGCGACAATGATTTATTCACGAATGCTGATAATCATGGCAAAACGGCCTTTCGTTGCATACAGCAAAATACTGAGCAGAAAAATATAATGATTGTCAATACCAGTAGCACGCAGTTTTCAATTCAGCAGACATTGCCGGTGAAAGCCGTAAAACAACGGCAGACAGCCACTGCCATTGAGCTTCATCCTGTCATTATAGATAATTCAACAATTCCACAGCTTGCGACAGCAAGTAACGCCACCGCAGTTCCAAATGCAATATCAATAATTCCACGATACACAAGTGAAAAATATTCAGGCCCACCACCCAGTTATGAATCTTCAGTCACCAACACAATAAATGATAAGCCACGAGTCATTGATCTCACTCTCACACAAGCACCCACAATGAAAATGATTGAGAAACAGTGTATAGTCGGCAACAACAACAACAGTACTAATAAATTGACGACCTTGAATGGCAGCGGCGCAGATGAGAATCGTCATTTGATGATAACGACTACGGCACCACAGAAAATTCTTGAATACACACAAACCGAAAATGGTGATTTTATGATAACGGAAAAGGTATTGCCGACTACAGCGGCAGCAACAACAACTCTAAATGTGTCGCATAATGACGAAGAAGATGATGATGATGATGGCGAGGAGCTTGTAGAAGAAATTCATGCTGCAGATGATAACGTATACAATGTTAAATATGTCGAGATTGATGAACCGCTTATTTTTGATTTATCAAATCAGCAAAATCAACTTGAAGAATCAACAGATGCCGAGCAGTTGGGTAATCAGAATTTAAATGAATCTCAAGGATCATGTTCTAATCATACACCTACAAACAAATCTGGTGTTAAAGTGATTAGTAATGTTAAACTTACATCAGCTGAAATGCTTTCACCAACTATTAAAGATATCATTAAACAATACAACAGCAGTACTACTAGCAAACAGACTGAAAAAGAAACACAAATTGATCATCAACCGGTTGTGGATATTCATGATGAGAGTGAAATGGAAGATGATGATATTAAAGAAGTTACAAATGAAACAACAGCTTTAATTCATTGCACAGAGACGTTGAATTTGAGTAAGGAGAAAGATGAAATGACAGCAACATCGATAATCAGTAATAGTCCTGTTTGCACAACAAGTGTTATTCGTAAAACAAATGAGAGTCCAATACCGTCAACATCAAGTAAAGCACAAGAGTGTGAACAATCCGAGGCGAGCACATTAGGAGAGTGCTCACGTAAACCCATAAATGTTGTGTTCAATACTACAAATCCAACAAATAGACTGAAGCAAAAGGAAATTTATAAGCAACCTAAGAAGCTGGTCGTGAAACTGAAAAAGCCACTTGTTGAAGCTAACGAGTGTTCTACATCAACAAATGAACAGCAGCAAACGATTATTAAAATCAAAGACGAGATTACAGAAAATGAAACAATTACGACAAGTAATTTAACTGATGACATGGACGTTGATGAGGTACAAAGTGCAATACAATCGACTGAAAGTGAAGCACAAGTTTGTAAAGTTGAAAGTAGTGAAGAGTTTACTGTAACTTTCCTTAATCAGCATGATTATAGTAACATCAATAAGATAACCGTGACACCTGAAATTCATCATGATTCTGAAACAAATCAGTCGATTTTAAGCATGGATCTTGAACCGGAAGCAAATGTTGTTAAGAGAGAACAAATTGAAAGTGAATTACCGATAATTGTGAAAACTGAAATGAATTCGTGCAGTACATCATCACTTGTATCAAATAATCAAAATAGTTCGTGTTCCCATAGTCCTGGTCCATCACGGCAAAATGTCGAGAATGCTGTATCAATAAATGAAAATTCACCAATCAATTTTCTTTATCAAAATGATCGCGTTCGATTTTCACCTCCACTATCACCCTATGTTTATATGAAATCATTTTCATCTAGTGAAGATCAACCTAAGACAGAGCCTGATGCTTCATGGAACAATAGTAGCAGTATTGTGACTCAAAATTCTGATCAGAACTCAACATGTTCTCGTTATACACCATCATTTGATGATAACAGAAGCAACTATACTGATTTAGATATAAAAACATCTAGAAATGCTCCTTCAACAGATAGTTTAAATATTCGTACTGATGAAAAGATGCCAGCACGAGGTGAAATTAGTGAGCAAGAGAGTAATGGAGAAATTGAGCAGCCATGGCATCATCCTTACTTTCAACTACAAGCTTATCCAAGTTCATATGATATGAATACAGCACAAGAATGTTGGAATCTTTCAAAAGCCGATAGTCAAAATGCATGTGATTCCAATAATATACAGAATAATGTGATAATCAATTTCCCACCAATAACAAGCCAAGAAGATGTGAAAGCTCCCGACTTATTAAAAACAATTATGCAAACAGTTACTAAGCAGGAACCAGTTGCCATCAATGATGAAGCGAGTGGAAGTAGCAGTAACATAATTGTTAAGAAAAATCGCTCATTCCGTTGTCAAGAGTGCTCAAAGGTCTTTGTAAAATTGCGTGCAAGAAATCGTCATATGGAGCAAGAACATCCTAATTTTAGACGTGTGAAAAAGATTAAAGCGGCTCCTACAGCTACACTTACCAGCAAATCAGAGGCTTCAGCTTTCTCAGCAGCTGCATCAACATCATCTACACTAAACTGGAATGCATCAACTACAATAACATCACAGCAAGAACAAGAAGTTAAAGTGCTGAGCATAATCAAAAATGAACCATCAACGTCTGCTGCTGTTTTAGTTAAAAATGAAATGAACCGAATGCTAATTAGCACTACTGGCTCAATCAAAATGGAAATGGACAGATTATTGCTTGAACCATCGACCTCATCAACTCCTCAACAAATTTCAACATTGGGACTGAAAATCAAGCGTACATACATGTGCGCAAAGTGTAATGAGCAATTCAGAACACTCAAACTACTTGATAAACATTTTCAAATTCATCCAGCTGAATGCACATTGTGTCAAAAAACATTTAATAGTTGGAATACCTTCTCGCTGCACTTAAAGCATCATCTTAACATTCGCGTGCATGCTTGCCGTTATTGTCCTAAGCGATTTGTTCAACGACAACGCCTAGTTGAGCATGAACGTATTCACACTGGACATATGCCAATCAAATGTCCCGATTGCGATGAAAGATTTAGAAGATACTCGAATATGCTGCATCATCGTGCTCGAGTACATCTAAATAAGAAAGCAAAACAAGAGGACTATGTTTGTGATTGTGGTGAAATATTTCAGACAAAAGCAAAACTTGAATGGCACCAGGAAACGCACGAAAATAAACCAAAACCCTGTCCGTACTGTCGTGAGCGTTTTACGCATCGAAATAGCTTGACACGTCACATTCGCTTATCGCATACGGAAAAATATGTGTTTGTTAAAAGCAAAGCTGTCAACTGTCCGATTTGCAGCTGCACTTATTTGCCATCAAGTATCAAAGCGCACATGGCAACTCATCAGCTTTCAAATAAAGAATATTCATGCACGATATGCTCAAAGCAATTTTCCACAAAATGGAATTTGAAGCAACATCACTGGACACATGCAAATCGCAGTTCGAAGCCATTCCAATGCAATTTATGTCCTAGTGCGTTTGTGCGTGAGACAGACTATACGACGCACATGAATGCTCATCGATCAATTAAACCCTTGACACGTCACATTCGCTTATCGCATACGGAAAAATATGTGTTTGTTAAAAGCAAAGCTGTCAACTGTCCGATTTGCAGCTGCACTTATTTGCCATCAAGTATCAAAGCGCACATGGCAACTCATCAGCTTTCAAATAAAGAATATTCATGCACGATATGCTCAAAGCAATTTTCCACAAAATGGAATTTGAAGCAACATCACTGGACACATGCAAATCGCAGTTCGAAGCCATTCCAATGCAATTTATGTCCTAGTGCGTTTGTGCGTGAGACAGACTATACGACGCACATGAATGCTCATCGATCAATTAAACCATTTACATGCAATACATGTGGCAAAAGGTTTGTACGAAAATACAATTGGTTGCGTCATTCACGTGAGCACGAGCGAGAAAAAAAATTCAACTGCGATATTTGCAACAAAAAGTTTCATCGAGCGTACTACCTTACAGAACACAAGAGAGTGCATACCGGTGAACGTCCATTTAGTTGCACAATTTGTGGCAAAACGTCTGCAACAAAAACGAATCATAACAAGCACATAAAGATTCATCATGCACGAGATCCGTTGACTGCTGAGGGCTAA
Protein Sequence: MEQQQCPICMLYLLPGMNLQDHLDTHPKDMIIKALLSVKTTEQLQQPQKPTPVSVASNEMATVFLTTTPFNSSQTHIYQQTPSQQQQNTSTYAVAKRNSGNSNLLLGNRPYRLTLDAASQALSSSPSTSATTFLNASSSAVAPHNNNNSNSSSSYGRRMTSQASDNDLFTNADNHGKTAFRCIQQNTEQKNIMIVNTSSTQFSIQQTLPVKAVKQRQTATAIELHPVIIDNSTIPQLATASNATAVPNAISIIPRYTSEKYSGPPPSYESSVTNTINDKPRVIDLTLTQAPTMKMIEKQCIVGNNNNSTNKLTTLNGSGADENRHLMITTTAPQKILEYTQTENGDFMITEKVLPTTAAATTTLNVSHNDEEDDDDDGEELVEEIHAADDNVYNVKYVEIDEPLIFDLSNQQNQLEESTDAEQLGNQNLNESQGSCSNHTPTNKSGVKVISNVKLTSAEMLSPTIKDIIKQYNSSTTSKQTEKETQIDHQPVVDIHDESEMEDDDIKEVTNETTALIHCTETLNLSKEKDEMTATSIISNSPVCTTSVIRKTNESPIPSTSSKAQECEQSEASTLGECSRKPINVVFNTTNPTNRLKQKEIYKQPKKLVVKLKKPLVEANECSTSTNEQQQTIIKIKDEITENETITTSNLTDDMDVDEVQSAIQSTESEAQVCKVESSEEFTVTFLNQHDYSNINKITVTPEIHHDSETNQSILSMDLEPEANVVKREQIESELPIIVKTEMNSCSTSSLVSNNQNSSCSHSPGPSRQNVENAVSINENSPINFLYQNDRVRFSPPLSPYVYMKSFSSSEDQPKTEPDASWNNSSSIVTQNSDQNSTCSRYTPSFDDNRSNYTDLDIKTSRNAPSTDSLNIRTDEKMPARGEISEQESNGEIEQPWHHPYFQLQAYPSSYDMNTAQECWNLSKADSQNACDSNNIQNNVIINFPPITSQEDVKAPDLLKTIMQTVTKQEPVAINDEASGSSSNIIVKKNRSFRCQECSKVFVKLRARNRHMEQEHPNFRRVKKIKAAPTATLTSKSEASAFSAAASTSSTLNWNASTTITSQQEQEVKVLSIIKNEPSTSAAVLVKNEMNRMLISTTGSIKMEMDRLLLEPSTSSTPQQISTLGLKIKRTYMCAKCNEQFRTLKLLDKHFQIHPAECTLCQKTFNSWNTFSLHLKHHLNIRVHACRYCPKRFVQRQRLVEHERIHTGHMPIKCPDCDERFRRYSNMLHHRARVHLNKKAKQEDYVCDCGEIFQTKAKLEWHQETHENKPKPCPYCRERFTHRNSLTRHIRLSHTEKYVFVKSKAVNCPICSCTYLPSSIKAHMATHQLSNKEYSCTICSKQFSTKWNLKQHHWTHANRSSKPFQCNLCPSAFVRETDYTTHMNAHRSIKPLTRHIRLSHTEKYVFVKSKAVNCPICSCTYLPSSIKAHMATHQLSNKEYSCTICSKQFSTKWNLKQHHWTHANRSSKPFQCNLCPSAFVRETDYTTHMNAHRSIKPFTCNTCGKRFVRKYNWLRHSREHEREKKFNCDICNKKFHRAYYLTEHKRVHTGERPFSCTICGKTSATKTNHNKHIKIHHARDPLTAEG

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01250395;
90% Identity: -
80% Identity: -