Basic Information

Gene Symbol
ARID4B
Assembly
GCA_014622435.1
Location
JACWBX010002202.1:52803-58224[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 1 2.8e-25 7e-22 77.6 0.0 2 89 277 361 276 361 0.96

Sequence Information

Coding Sequence
ATGCAAGGAATACCACAAAAGGATAAAGACGATCCCGTTGTTCTATCAGTGGGTGCACAAGTGAGTGCAAAATATAAAGGAGCGTTTTGTGAAGCAAAAGTTCATAAGGTCGTAAAAAATATCAAAGTTAAAGTCGCATTTAAAAAAGGTGGGACAGCAACAGTAACAGATGATGAAATTGTTGGTGAAATTCGTGTTGGAAATATCGTCGAAATAAATGATGCAGATAAAAAGGAAACAAATGAGGCAACTATCACAAAAATTCAGGATTGCTCACAATACACTGTAGTTTTTGATGATGGCGATATTGCAACATTAAGACGCACTGCTCTATGCCGTCAGTCAGGAAAACATTTCAACGCTTGTGATACTCTTGATCAACTTCCTTTGACTCATCCAGAACATCGAGGAGGAGGCAAACGAACAAAAACGCAAGATGAGTATGAGTCAGATGATGAGGAATATGCAATTGGAAAAGTAGTTTGTGTGGAAAATAACGATACAAAGAAGAAAAATGTCAAAGAGAGTTACTTTCCTGCCTTAGTGGTTGCACCAAAAGCCCAGGAAAATGTAAAAATTCATATTAAAACTGAATATTTGGTGAGATCATTCAAAGACGGTCGTTATTATACCGTTCCAAAAAAAGAGGTCACTGAATTTACAAATGATACTGCATCAAAATCTGACTCAACTGCTGTTGCAGCGGCTCGCGAGTTTTTAGATAAAAATGTTCTCCCTCCACATTGGGATCGTGAAGTTCTGATTGATTCAGCCAGTTTAAGTGATCAAGAATTATCTGATAGTTCAGATGATGAACCGAATGAAGTGAAAGATAGATTTTTTGCACAATTACTCGAGTTCATGGAGAAACGAAATTCACCTCTCAATAAAGGTCCAAGTATTACAAATCGTGATGTGGATCTGTATAGACTCTACTATTCAGTAGAAAAATTGGGCGGTTATGCTAATGTTACTAAAATAAGAAACTGGAAAGCAATTGCTAAACGTTTAGGATTCACTCCAACTGATGCCATTGTAAAATTGGTCAAACATTCTTATAGAAAATTTTTATTAGCATTTGAAGAAGCCGTTTCAAAAGGAATTGAGGATTTACCACCAAGAGCTAATCGAGATAAAGCAAGAAGCAGTTCAACACGTTCTGGTTCTGTGGCGTCACCAAAAGTAGTCGAGAGTGCAAAGAAAAAAGTTGAAAAACCAACAACTAGTAGTGTAGCAGATGATTCAGAAAATACAAGTGAATCGATTAAAGTTACAACTTCTCGAAAATTGTCGACAGCAAGTGTAAAATCAAAAGTCGATAAAGCTGAGGAGAAAATTAAACCCGAAAAAGCAGAGAAAGAAAAGCCAGAAAAGAATAAGGATAATAATAAAAATGAAAAGGACAGTGATAAAGTTGATAAAGAGAAATCAGTATCAAAAGATGATGAAGTAAGTGCAGCAACAGCTTCTTCACCTTCACAATCAGTCACAACTGCGTCAGCAAAGAAGGAAAAAACTAAAAAGAAACCTCCAGAAGGTAAAAAGAAGAAAGAAGATACGGCTGAGAAAAAAGAAACTATAACGACAGCTGCGAAAACACAAGTACCTTCGGGACCAAGTATTGCTGATGATGTTCTGATTGAAATTGATGATCGATTAAAAGTATACTATCGTGGCTCTTCTGACTATGAAGCAAAGGTATTGGATATTTCAGAACAAGAGGGTAAGCCTGTATATAAAGTTCACTATAAAGGTTGGAACGCTCGTTATGATGAATGGATTCATCGTGAAAGTATAGCAGAAAATTTGACAAAGGACGAAGCGAAGAAGAAGCAATCTAATAATAATGGTAATAATACAAGTGGTATCGTTAAATCTGCCAGCACTCCAAGTACAAATTTACAAACACCTACTACTAAGAATGCAACAAAACGTGCTCGTAATAGAGCAGATACTACTGCCTCGTCGCGTTCTACTACTCCTTTATCGAATACATCAAGCAAAACTAAAATTGCCCAAAAAAGACCGACACGCGGCACTCCAACAAGCAAAAGTTCTAATCGAGGTTCAATGATTGATGACAACTCAAGTGAATCAGATGAGCCAATTAAAAAGCCTTCAGAGAAGAAAGAAAAATCGAATGATGACAAAAATACTAGTATTCAAAAATCATCATCTGCTGTTGATGTAGCACCAAATGACAATAAAGATGTATCTAAAAGTGAATCAAAAGTACCTAAAGAAATAAAATCAAACGAAAAGGCACAAACTTCAGACGCAATAAAATCAGACGATGAAAAATCTACAAAGTCCTCAATCAAATCTGGAAAATCGCCCTTCGATGTCAAAAATTCAAAACACAAAACGATTCAACGCGATTCTAGTCGGTCTTCGTTCCATTCAACTGATAGCGATTCATCACATTCTGTTCCAAGTGATGTGCCAAACAGTTCAAAAAGTGCTTACACGAGTGAAAATGAATCAAATGAACCAGAGAAAATTTTATCTTCATCAACAAGTACTATAGCAATAACTACTATAAAAACTGAAACTAAAAAATCCTCATTTAGATTCGATGAAGAGACAAGTGATGTCAAAAATCCTCTTACATTCTTTGAGAAAACAGTGAGTGAGAAAACAGAAGTTAAAACTGATAGCGGAGCAATATTTCCAACACGAAAGCCAAACATATTTCAAGACAAGAAAGCAGCACAAAAGGTCGGTGCCGCTGATACTTCAAAACTTGGTCGTTTCGGGCAATCATTAGCAAAAGAGATCGGCAAAGGAAAGAAGCAAGATGTCAAGAGCGAAGATAAGACCACAGAAAGTGATATTTATGAATTTAAAGACACTGAAGAGTTTTCCGATGCAAAAGTTGTTAGCACCACAGTTAAAAAACAAGAATCACCCAACGAGCCGACTAAAAAGCAACAGCTGGCACAACAAAGAAAGCAAGCTAGACAAAATGTTATTGATACATCAACTGGTGGTCAAATGGAAGACATTGAAAGTATGATTAAAACATCAATTGTATCGCTTCCAAATAAAAAGCAAAAGAAATCGCCAGTCAAAGAAGAAAAAGCCCAACACTCGATGATTATGGCTCGAACACCTGCAACAACTTCTCAAACTGTAATTCCTCAGCCATGGAGTGCAATTCAGTCAACACCTCAAACATCACAAGATCTTTTCCCGAAAACTAACATCACTCCTCCAATTTTATCACAAACTCTAGTAGGAAAATCAAAAACAGACTCAACATTTGATGTCTTGAGAAAATCGCCAAGTTTCAATATGCATCATTCAGATGATTTTATAACGGCAAAACCATCAAGTCAAACAACGACAAAGAACATTACAGCTGGTCCTGTAAAATTCAGCAGTGATTTGATTGAGCAGCATGAATTGTTGAAACCAATTATGGTTCCAAGTAAAGAAGATGAAAAACCAGAATTAGAAGCATTTAAGAAAATTCTTGAGCCATCATTTCAATTATTTCCAAAAGCTGAAGTAAAATCATCAATTGCAGATAAATTATTGAAAGCAATTAATCAGAAAGATGCTGCAAATGAGCGTGAAATTTCACAATATAATGCTATTATTAAAGATGAGCCATATGTTAAAATTGAAGAGCTTAAAATGGATCAATATACATTTAAAGCTAAATCGCCAGGAACTTCAAAACCAGCAGTTGTAGTGTCAAGCACACTTACTTCAACCAAAAAGCCTCTACTCATATCGTCTGAAACTAAAATCGATGATAAAGCAAAGGGGAATGTTGAACTTCAGGGAATTATCGAAAAACTCGAGAGTGCCATTTCTACTCCAATCTCATTAACAGCAGCAACTACTGTAGAAGCTCCGCCATCGACTCAATTTCCTTCAACAAAAAAACAAAACGATGATTCAGATACAGATTCAGATCGTTTAGTAATTGAAGATGAGACAACACCTAGCGAAACAACTGATAAGAAGAAAGCATCCATTGGTGCACTCGAGTCAATCATGCTGCAAGATGATGTTCCATATAAACACAATAATCCTAATACAAAGGAGGCTGAGAAGAAAACTGATAGTGGTGAACAACAAAGTGAATCAATGTCTCTTTTACTTTGTGAAGAAACAATCCCTGGTTCGCCTGCTCCTAGCACATGTAAAGATCCGTTAAGTGAAATTGGAAGAAGTCCCACTTCAGGCTTCGTTCATCCTTCTATGCCACAAAGTGGCAGTGGATATACTACAATGAAATATACTGGTCCGACACTACTTCATCATCAACAATATCAATCTGCATCACATCAAGGCAATGTGAAGTCAACAGTTCCAATGGATATAGATAATGAAGTAGGAATTGAAGCAGCCACTGGTGATATTTTGCGTGATAAATTAAAATCTGAACGAGGTAGTGCGACAAGTAGTGGAAACAATACAAATAACAATTCAGATAATTCTCTTGATGATGATCAATCAGAAAGCGAAAAGAATGTTAAATCAGATATTTCACGAAAAAAGAAAAGAACAATGAAGATTGAACCAGATATTCATGCAAAGAGACGTCGACAACAAGCGAGAACTCAAACAAATGTAAGAGGAAATCTTCAAGGCAATGACTCTGATAGCAATGATAATTCGGATGTGAATATTTTTACAAGAAATCAAGTGGAACCAAGTCAAGGAAGCGCTAATAAAATACAATTCAACTTTTTGGTTGAACTTGATCCAAATATGCCGAGTTGTCATCGTATATCGCTTCTTGAGAAGAAAATTCAAGATCTGAGAAAAACATACATGATGATTAAAAATGAAATGAATGCAAAAGAAAGAAGACGAAAGAAAATGAGGAAACGTGAAAGGGAAAATAAGCAAAAGCAAACTGCAAAAGTGTCATAA
Protein Sequence
MQGIPQKDKDDPVVLSVGAQVSAKYKGAFCEAKVHKVVKNIKVKVAFKKGGTATVTDDEIVGEIRVGNIVEINDADKKETNEATITKIQDCSQYTVVFDDGDIATLRRTALCRQSGKHFNACDTLDQLPLTHPEHRGGGKRTKTQDEYESDDEEYAIGKVVCVENNDTKKKNVKESYFPALVVAPKAQENVKIHIKTEYLVRSFKDGRYYTVPKKEVTEFTNDTASKSDSTAVAAAREFLDKNVLPPHWDREVLIDSASLSDQELSDSSDDEPNEVKDRFFAQLLEFMEKRNSPLNKGPSITNRDVDLYRLYYSVEKLGGYANVTKIRNWKAIAKRLGFTPTDAIVKLVKHSYRKFLLAFEEAVSKGIEDLPPRANRDKARSSSTRSGSVASPKVVESAKKKVEKPTTSSVADDSENTSESIKVTTSRKLSTASVKSKVDKAEEKIKPEKAEKEKPEKNKDNNKNEKDSDKVDKEKSVSKDDEVSAATASSPSQSVTTASAKKEKTKKKPPEGKKKKEDTAEKKETITTAAKTQVPSGPSIADDVLIEIDDRLKVYYRGSSDYEAKVLDISEQEGKPVYKVHYKGWNARYDEWIHRESIAENLTKDEAKKKQSNNNGNNTSGIVKSASTPSTNLQTPTTKNATKRARNRADTTASSRSTTPLSNTSSKTKIAQKRPTRGTPTSKSSNRGSMIDDNSSESDEPIKKPSEKKEKSNDDKNTSIQKSSSAVDVAPNDNKDVSKSESKVPKEIKSNEKAQTSDAIKSDDEKSTKSSIKSGKSPFDVKNSKHKTIQRDSSRSSFHSTDSDSSHSVPSDVPNSSKSAYTSENESNEPEKILSSSTSTIAITTIKTETKKSSFRFDEETSDVKNPLTFFEKTVSEKTEVKTDSGAIFPTRKPNIFQDKKAAQKVGAADTSKLGRFGQSLAKEIGKGKKQDVKSEDKTTESDIYEFKDTEEFSDAKVVSTTVKKQESPNEPTKKQQLAQQRKQARQNVIDTSTGGQMEDIESMIKTSIVSLPNKKQKKSPVKEEKAQHSMIMARTPATTSQTVIPQPWSAIQSTPQTSQDLFPKTNITPPILSQTLVGKSKTDSTFDVLRKSPSFNMHHSDDFITAKPSSQTTTKNITAGPVKFSSDLIEQHELLKPIMVPSKEDEKPELEAFKKILEPSFQLFPKAEVKSSIADKLLKAINQKDAANEREISQYNAIIKDEPYVKIEELKMDQYTFKAKSPGTSKPAVVVSSTLTSTKKPLLISSETKIDDKAKGNVELQGIIEKLESAISTPISLTAATTVEAPPSTQFPSTKKQNDDSDTDSDRLVIEDETTPSETTDKKKASIGALESIMLQDDVPYKHNNPNTKEAEKKTDSGEQQSESMSLLLCEETIPGSPAPSTCKDPLSEIGRSPTSGFVHPSMPQSGSGYTTMKYTGPTLLHHQQYQSASHQGNVKSTVPMDIDNEVGIEAATGDILRDKLKSERGSATSSGNNTNNNSDNSLDDDQSESEKNVKSDISRKKKRTMKIEPDIHAKRRRQQARTQTNVRGNLQGNDSDSNDNSDVNIFTRNQVEPSQGSANKIQFNFLVELDPNMPSCHRISLLEKKIQDLRKTYMMIKNEMNAKERRRKKMRKRERENKQKQTAKVS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01249856;
90% Identity
iTF_01249856;
80% Identity
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