Basic Information

Gene Symbol
Kdm5
Assembly
GCA_014622435.1
Location
JACWBX010004201.1:28626-34654[-]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.1e-25 2.8e-22 78.9 0.1 2 89 144 227 143 227 0.95
2 2 0.19 4.7e+02 1.2 0.1 48 81 1085 1117 1082 1122 0.72

Sequence Information

Coding Sequence
ATGTCTCCCACCACACAACAACAACAACAACAACAAAGCAAGGTTCATTTAACTCCACGTAAAGATAATTCTGATAACTATATAGGCAATGGAAGGAGTTATTTTGATAGTCCATCACCTACAAAAGATCCATTAGATCTCAATTCACCGAAATCAACGGGACACCATCATCCACATTGGCAGATGGATAAATATGAAGAGTTTGAGTTTGAAGTGCCTGAAGAAGCACCAGTTTTTGTACCAACAGCCGAAGAGTTTAAAAATCCACTCATTTATATACAAAAAATTCGACCATTAGCAGAAAAATATGGAGTTTGCAAAATTAAGCCACCCGAAGATTGGCAGCCACCTTTTGTACTCGATGTTGATAAATTACGATTTACGCCGCGAGTTCAAAGAATCAATGAATTAGAGGCCAAAACACGTATAAAACTCAATTTTTTGGATCAAATTGCCAAATTTTGGGAATTGCAAGGAAGCTCATTGAAGATTCCAATGGTTGAGCGCAAGCAACTCGATTTGTATACACTTCATCGATGTGTCCAAGAAGAAGGTGGACTTGAAATTGTCACAAAAGAACGTAAATGGTCGAAAATTGCAGGTCGTCTTAAATATCCCAATGGAAAGAACGTTGGGACAATTCTAAAAGGTCATTATGAGCGAATTCTATATCCATATGACATTTATATGAGCGGAAAACATGTCGATGGAGCGACTCTAGAAGGTTTTGAAGAATCAGATGATTGTGACTACAAACCGCATTGCATTATTTCAAGGCAAGGTGTAAAACCTCAACCAGAAGTTGCTGCTCGACGTTCTAAAAGATTTCAAAATATTGAACCTGAAAATGGCGAAATGAATTTGTCAAAAGACAAAAATGCTGAATTACGAAGACTTCAAATGTCAACTCCAAGTCCATCGAAGAAAGTATCACCATATAAACAGCGAATGAGTCCTAAATTGTCAACTCCAACTAAATCTGATCCACTTGCAAAGTATGTTTGCTTAAATTGTAATCGCGGTGATGTTGAAGAAGCGATGCTTTTGTGTGATGGATGTGATGACAGTTATCATACTTTTTGCTTGATTCCACCACTCAATGATGTCCCAAAAGGTGACTGGCGTTGTCCTAAATGTGTATGTGAAGAAGTCAAAAAACCATCAGAAGCATTTGGCTTTGAACAAGCATCACGTGAATATTCATTGAAAGAATTCGGAGAAATGGCTGATCAATTCAAGTCAGAATATTTTAATATGCCGGTTCATATGGTTCCAACTGAAGTTGTTGAGAAAGAATTTTGGAGAATTACATCAAGCATTGAAGAAGATGTAACTGTAGAATATGCAGCTGATTTGCATACAATTGAGCATGGTAGCGGTTTTCCCACTCGTGATTCAAACAATCTTGGTGCAGACGATCATTCATATGTCGAATGTGGCTGGAATTTGAACAATTTTCCAGTTCTTGAAGAATCAGTTTTGGCTTATATCAATGATGATATTTCTGGAATGGTGAAACCTTGGCTTTATGCTGGTATGTGTTTTGCAACATTCTGCTGGCATAATGAAGATCATTGGAGTTATTCAGTTAACTATATGCATTGGGGTGAGCCAAAAACTTGGTATGGTGTTCCTGGATCTGCTGCTGAGCAGCTTGAAACAGCCATGAAGAAGCAAGCACCAGAATTATTTGCTTCACAACCAGATCTTCTTCATCAACTTGTCACAATCATGAATCCAAATATTTTAATGAATGAAGGTGTTCCAGTTTATCGCACAGACCAACATGCTGGTGAATTTGTCATCACTTTTCCACGCGCATATCATGCTGGTTTCAATCAAGGCTACAATCTCGCTGAAGCTGTCAATTTTTGTCCAGCTGATTGGGTAAAATTAGGACGTGAATGTGTCGATCATTATTCACTACTTCGACGTTATTGTGTCTTTTCACATGATGAGATTATTTGCAAGATGGCACTTGAAGCTGAAAGGTTAAATTTGGGAATTGCTACAGCTTGTTATCTTGATATGGTTGAAATGATTGATAGTGAGAAAAGAATGAGAAAATCTTTGCTTGAATGGGGTGTTACAAAAGCACAACGAGAAGCTTTTGAGTTGCTGCAAGATGATGAACGTATTTGCGATTTATGCAAAACAACTTGCTTCCTTTCAGCAGTTAGTTGTCAATGTACACCAGCTCTTGCATGTTTACGTCACTTTAAAGAATTATGTAAATGCCCACCTGAACAACATACACTAAAATATCGCTACACTTTAGATGAGTTGCCGCTTATGCTGAAAAAATTGAAAATTAAAGCTGAGTCGTTTGAAACTTGGCTAACAAAAGTAAGAAACATTCTTGATCCAACAATTTCAACAAAAGTTTCATTCGATGAGCTACAAGAGCTTGCAATGGAAGCACAACAAAAGAAATTTCCTAAAAGTCCACTTCTTGAGAGACTAAATTCTTCAGTTATTGAAGCAGAAAAATGCATCACAGTCATTCAACAACTTGATATCAATAAAATTAGAACACGAAATTCGAACGATATTGCATCACGTTATAAAATAACACTTGAAGAATTAGATTTGTTTGTACTTGAATTAGACAATTTGTGCTGTACAATTGATGACTTTGTGACAGTCAAAGAATTGCAACAGATGGGTCATGAATTTGTTGCAACTGTCAAAAGACTACTGGTTAAAGAATCAGTTGCCACGAATGATGCTAAAGAATTGCAAAAAGTTATTCAAGATGGCAGTACATTGTGCATTGAATTGCCTCAACTTGATCAGTTGAAAGCACGATTAGAGCAAGTCAATTGGTATCGAACAATTCGTGCTTATAGAGAGAAAACTGAACGACATCAATTGAATGTATTGAAAAAGCATTTAGCAGATGGCATGAAAATCCCACCGCATTATATAATCGAACGAGAACTCAGTGAGATTAAAGAAATGATAATTGAAATGGAATTATGGGAAGATCGAGCACAGAAAATTTTCGAATCTTCACTTCCAATTCAATTACGTGATGTTCAAGATTTGCTGAGACTTGGTAAAAATATTAAAGGATATTTGCCATCATTTACAATTTTAAAAGAAGCAGTTGATCGTGCAAGGGAATTGCTTGAACATATTGATGCTTTACAGTCAGATGAAAATTATCCTTATGTGGATTCAATTGAATTCATTATTAACAGTGCAAAGTCATTGCCATTCCAATTTGAACCAATTCAGACAATGGAAAAACATGTAAATGAAGCAAATGCATGGAAAGAGCAAGCAAATCAGATGTTTCTAAAGAAAAATACAAAATATACATTATTAGAGGCGTTGACGCCAAAATATGAATCTGATTTGACATTTGCTGTTGTTCCACCTTCACTCTCATCACCACCAATTCATCGTGCAGGTAGTGATGATTGTGAATCAGCATCACCATCCTCAACTGCCTCATCATCTTCGACAATATCAGCAAATAGCTCTAATGGCTCTAGTGAAGGCAGCTATCTTGATGATTTGGGACCAGCAGTTGTTGTTGCGACATTTAAGAAAGCAGAAAAGAATGAAATTTGTCGCATTGCTGAAATTCGACGAATAAATTCAGAGAAAAATCCTGAACGTGATGCATTTTGCTTATGTAAAGGTCGATTTATGGGCTATATGTATCATTGTCGTTTATGTAATGATTGGTTCCATTCATCGTGTGTACCAGCAATGACAAAGAATTATGATATAAAGCAGGAGCCATTAGAACTGCGAAATAAATATCTTTGCCCCATCTGTATGCGAACGAAGCGTCCAAAATTGGAAAATATTTTATCACTGCTTCTATCACTACAACAAATTCCATTGAGAGTTCCTGAAGGTGAAATTATTCAATGTGTTACTGAGCGAGCAATGCAATGGCAAGCGAGAGTACGGCAAGCATTAAAACGAAAAGATATTGAAATGGCATTGCTGGAACTTTCAATGCATCAACCGAAACAAGAACAACAGCAGAATCTTAAGGATCAAGTAAATCAGGAAAAGAAGGGAAATAAGAGATCAAAGTTAAAATCAAAATTGGGTGAACAAGAACAATTGTCAGACTGTGGCGGTTCTGATGATGATAATCATGGAATGCAACTTGATATATCAGATAAAGTATTACATCCAACTGTACCTTCACCATCAATTCAATTGAATAAGGCAACTATACAGTTCTTAGAAGAATTGATGATGGAAGGTGATTTACTTGAAGTCACATTAGATGAAACAATTTATCTTTGGCGTTTATTGAATTCTGCTAAAAATTATAATAATGAACTCGAAATTATTCGTAAAAAGTACAATATACCTTTGGAAATGCCAATGCGTATCTACAGTGAAGACAGTATAAGAAAACGTAAATTATTGTCAGGCGAAGAAAAGCCAACAAGAAAGTATACAAAAACTATAAAAGAAGAGATTAAGAAAGAGCCAATCGATTTATCAGATAATGATATTGATGGCGATGATGTGATGGATATTGAAGAGGCTGATGGAACGTTACCGAAAAAGGGAGCAAATAAGTTGGCATCAACAGCTGTTAAAAAGCGACTGATGAAGAAGAAAAACTTAAAAAAAGTTGTCAAAAATGAAAAGGACAAAGAACAACAGCAAAAAGAGAAAATTAAGCCGAAAAGAAAGAAGAAAAATTTACAACAAACTCCACCGACAGTTACTGCAGAAGGCAATGGTAGTTCAAATCAAACACAATCAGTTTTAACAGCATCGACTGCAGGAAATACTTTAAAAATAAATGCACCAGTTGAGCCTTCAAAGCAGCAACAACAACAGCAGCAGCAGCCTACAAGAAAAACTGCAAAAGTCAAAGAAAAGAAAATTAAACCGAAAGTTCAAAAGACAGCGATAAATAAACAAAAAGGAGCAAGTGAAAAAGATGAAAATTCAAAAACTGCATCACAAAATGATTCTGATTCAGACTCATCAGTCGAAGAATCTGATGCTTATGAGACTTGTGGAGTTGTTAACTGTACTCGACCATCAGAATCTGTACAAGATTGGATTTTATGTGACGGTGGATGTGAAGTTTGGTATCATATGGTGTGCGTTGGACTTAAAATAAAAGAAGTAAAGCCAGATATGGAATTTATTTGTAATAATTGTAAAAACTCTAAAGATAACAACGCTCAATCATCACAAAAGCAGTAA
Protein Sequence
MSPTTQQQQQQQSKVHLTPRKDNSDNYIGNGRSYFDSPSPTKDPLDLNSPKSTGHHHPHWQMDKYEEFEFEVPEEAPVFVPTAEEFKNPLIYIQKIRPLAEKYGVCKIKPPEDWQPPFVLDVDKLRFTPRVQRINELEAKTRIKLNFLDQIAKFWELQGSSLKIPMVERKQLDLYTLHRCVQEEGGLEIVTKERKWSKIAGRLKYPNGKNVGTILKGHYERILYPYDIYMSGKHVDGATLEGFEESDDCDYKPHCIISRQGVKPQPEVAARRSKRFQNIEPENGEMNLSKDKNAELRRLQMSTPSPSKKVSPYKQRMSPKLSTPTKSDPLAKYVCLNCNRGDVEEAMLLCDGCDDSYHTFCLIPPLNDVPKGDWRCPKCVCEEVKKPSEAFGFEQASREYSLKEFGEMADQFKSEYFNMPVHMVPTEVVEKEFWRITSSIEEDVTVEYAADLHTIEHGSGFPTRDSNNLGADDHSYVECGWNLNNFPVLEESVLAYINDDISGMVKPWLYAGMCFATFCWHNEDHWSYSVNYMHWGEPKTWYGVPGSAAEQLETAMKKQAPELFASQPDLLHQLVTIMNPNILMNEGVPVYRTDQHAGEFVITFPRAYHAGFNQGYNLAEAVNFCPADWVKLGRECVDHYSLLRRYCVFSHDEIICKMALEAERLNLGIATACYLDMVEMIDSEKRMRKSLLEWGVTKAQREAFELLQDDERICDLCKTTCFLSAVSCQCTPALACLRHFKELCKCPPEQHTLKYRYTLDELPLMLKKLKIKAESFETWLTKVRNILDPTISTKVSFDELQELAMEAQQKKFPKSPLLERLNSSVIEAEKCITVIQQLDINKIRTRNSNDIASRYKITLEELDLFVLELDNLCCTIDDFVTVKELQQMGHEFVATVKRLLVKESVATNDAKELQKVIQDGSTLCIELPQLDQLKARLEQVNWYRTIRAYREKTERHQLNVLKKHLADGMKIPPHYIIERELSEIKEMIIEMELWEDRAQKIFESSLPIQLRDVQDLLRLGKNIKGYLPSFTILKEAVDRARELLEHIDALQSDENYPYVDSIEFIINSAKSLPFQFEPIQTMEKHVNEANAWKEQANQMFLKKNTKYTLLEALTPKYESDLTFAVVPPSLSSPPIHRAGSDDCESASPSSTASSSSTISANSSNGSSEGSYLDDLGPAVVVATFKKAEKNEICRIAEIRRINSEKNPERDAFCLCKGRFMGYMYHCRLCNDWFHSSCVPAMTKNYDIKQEPLELRNKYLCPICMRTKRPKLENILSLLLSLQQIPLRVPEGEIIQCVTERAMQWQARVRQALKRKDIEMALLELSMHQPKQEQQQNLKDQVNQEKKGNKRSKLKSKLGEQEQLSDCGGSDDDNHGMQLDISDKVLHPTVPSPSIQLNKATIQFLEELMMEGDLLEVTLDETIYLWRLLNSAKNYNNELEIIRKKYNIPLEMPMRIYSEDSIRKRKLLSGEEKPTRKYTKTIKEEIKKEPIDLSDNDIDGDDVMDIEEADGTLPKKGANKLASTAVKKRLMKKKNLKKVVKNEKDKEQQQKEKIKPKRKKKNLQQTPPTVTAEGNGSSNQTQSVLTASTAGNTLKINAPVEPSKQQQQQQQQPTRKTAKVKEKKIKPKVQKTAINKQKGASEKDENSKTASQNDSDSDSSVEESDAYETCGVVNCTRPSESVQDWILCDGGCEVWYHMVCVGLKIKEVKPDMEFICNNCKNSKDNNAQSSQKQ

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

90% Identity
iTF_01249854;
80% Identity
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