Ppem008751.1
Basic Information
- Insect
- Polypedilum pembai
- Gene Symbol
- retn
- Assembly
- GCA_014622435.1
- Location
- JACWBX010003524.1:118657-124403[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 1.8e-27 4.4e-24 84.6 0.0 2 89 158 243 157 243 0.96
Sequence Information
- Coding Sequence
- ATGGATCGTGAACATTTTTCGGACGATGATTCACCAATGTCAAATTCAACACCACATTCAGAAGAAGATGACAAACATAGCGAAGATCTACACGATTATCAGCGATCACCGCCATCAAAATATTTAGAAGAATCACCACCGCACGAGGAGCCTGACTCATTCGCACAACAACAACGTGAACTCCTCGAGCGATTAAAAGAGCAATTCACATCATTTCCATTTCATCATGCGTCCGCCTTTCCCGGTTTGGATTTAACCACAAGCGATCATTCGCAAAACAGAATAAAAGCAACAGAGGCTCCACACGATTTTCCCTTCTCAAGTTTTCCAACCCCACCACCATCAAAAGATGAAGTTAAAATTTCATCCGCAAAGAAAAATGGTAGTAGTCAGAATAATAATAATAGTTGGAGCTATGAAGATCAGTTCAAACAAGTTAGACAACTCTACGAAATTAATGACGATCCAAAGCGCAAGGAATTTTTAGATGATTTATTTACGTTTATGAAAGATCGAGGCACACCTATCAATCGACTTCCAATCATGGCAAAATCAGTGCTGGATCTTTATGAACTTTACAAGCTAGTAATTGCGCGTGGAGGTCTCGTTAACGTTATCAACAAAAAACTATGGCAGGAAATTATCAAAGATTTAAATTTACCGTCAAGCATAACAAGTGCTGCTTTCACCTTACGCACACAATACACAAAATACTTGTATCCATATGAGTGCGAAAAGTACAATCTATCATCAGACTCGGAATTGCAAGCAGCTATTGAAAATAACAAGCGTGACGGTAGTCGTCGATCAACGTCAAATTACAATCAATTTAGTCCACAATCGCCTCAGACATCGCATCATCAGCAGTTGCAAATGGCCATGGCATCACAATTGGCAGCAGCAAGTGCAAATAGTAACAACAGTAATGCAGGTCTTAATTTATCAAGCAACAGCAATGGCAGCAATAATCAATCGAACGAAAGTCAGCAGCTGAATGAAATGCAATTGGCACAACAGCGTTTCATGATGATGATGTTTCTTTACAATCAATTCTTACAAGCGCAAACTCAATCGACATGA
- Protein Sequence
- MDREHFSDDDSPMSNSTPHSEEDDKHSEDLHDYQRSPPSKYLEESPPHEEPDSFAQQQRELLERLKEQFTSFPFHHASAFPGLDLTTSDHSQNRIKATEAPHDFPFSSFPTPPPSKDEVKISSAKKNGSSQNNNNSWSYEDQFKQVRQLYEINDDPKRKEFLDDLFTFMKDRGTPINRLPIMAKSVLDLYELYKLVIARGGLVNVINKKLWQEIIKDLNLPSSITSAAFTLRTQYTKYLYPYECEKYNLSSDSELQAAIENNKRDGSRRSTSNYNQFSPQSPQTSHHQQLQMAMASQLAAASANSNNSNAGLNLSSNSNGSNNQSNESQQLNEMQLAQQRFMMMMFLYNQFLQAQTQST
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_01249853;
- 90% Identity
- iTF_01249853;
- 80% Identity
- -