Basic Information

Gene Symbol
ZNF526
Assembly
GCA_963422495.1
Location
OY730181.1:1125031-1137971[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 10 0.04 3.8 9.2 2.8 1 23 239 262 239 262 0.95
2 10 0.00013 0.012 17.0 1.7 1 23 269 291 269 291 0.97
3 10 0.13 12 7.5 4.2 1 23 295 318 295 318 0.97
4 10 0.021 2 10.1 2.6 2 23 323 345 322 345 0.96
5 10 0.0012 0.11 14.0 0.8 3 23 350 371 348 371 0.96
6 10 0.017 1.6 10.3 3.1 1 23 374 396 374 397 0.94
7 10 0.2 19 7.0 1.5 2 21 406 425 405 430 0.91
8 10 0.0024 0.23 13.0 2.5 2 23 437 459 436 459 0.94
9 10 0.00011 0.01 17.2 0.6 2 23 498 519 497 519 0.97
10 10 0.00012 0.012 17.1 1.4 1 23 525 548 525 548 0.97

Sequence Information

Coding Sequence
ATGTCCAACTTAATGGAAACTGGAGCAGTATGTCGAGGCTGCTTGGCCACTGATAGAACTCTAACCTCTATTGAAAATTATTACCATATTTATCACGAAATATTAAAGGACTCTGTAAAGGTGCATCATGAATCAGAAATCCCGTTTATGTGTTGGGAGTGTACTGCTCATTTgagaaattttgaaaacttcCGGCACAGAGTATTAGAAGCTGATCTGCTTCTGTCAGATTTAAGTAAAGGATTTCAGttcAAAACATTATCTACTTTAACTGTTTTAATCAAACAAAATGCTATCGATGTTGAACTCAGCGAAGATGTTAAAATTGAAACTGCACCAAGTAATGATTGCGATGGAAATGTTAAAATTGACATTGAAGTAAAAGAGGAACCGATAGATTACAAGCCAACAGACGACAATGATGATTACCAGGAACCCATTGATTTCAATGAATTCTTCCAAAATAATGATTTAGTCGCCGAGAATATTAAGTTGGACCCAGATGAAGATGCTTTAACAATTGTCAAAAAAGTGGAACACAAAGCTAAGATCCAAAGCAAAGTTAAGGCAGAAAAGAAGGTACAGAAaaagaattataaaataattttcctgaATACAAACAAAGAAATGTCTAAAAGTGTGAGAATAGATGATAATGAGATGGCATATTGGATGGAGCAAGAAAAAACGAGAAGAGGCTATATAATCCGGAAATATAAATGTGAAATGTGTATAACAGGGTTCTCCCAGAAGAAATTGTATTTAAGGCACATTGACAATTGTCATAATGAGTCAAACAACCAGTTTATATGTGGCATATGCACACGACGGTTTCACACGAAACCCAACATGGTCCGGCACATCAGACTTCATTACACCAAGTACAGATGCAAGTCGTGCGAGTTCGAGTGCTACCGTAATTATCAGATGGAGCAACACCTTCTATCCACGCACCGGCGGTCGGTGGAGTGTCTGAAATGTGGGCTTAGTTTCATCCTGTTACACCACTTCTACGAGCACTATCGCCGGCTCCACAAACACGTCATCTGCGATTACTGCGGGAAGAGGAAATCTAAGAAATCCAGGTTGATCGCGCACATACGGAGGTTCCACACGGCGCACCGGTGTGAACTCTGCAACAAGCCGTACAAGACGTTCGAAGGGCTCGTCGACCACAACAAGCTGCACCACGTGAAGTCGGCGCGCGAGCTGTGCTACTGCGTCGAGTGCAACTTACAGTTCGACAACGTCGCGCTGTACACGCGCCACATCAGTAGGAGCACGAAGCACAAGAAGAAGGCCGGGATCCCATGTCCGGAGTGCAACAAGGTGTATGACAGACGGTGCACCATGACCAACCACTACAACCATGTACACCTCAAGAAGACCAAACATTACTGCGAGCCGTGCGAAAAGTATTTCCTGAACGGTTACCGTCTCCGGCGGCACAAAGCCAGCGTACACGACAAGGTGCCGCCCGTCAAGAACAAAATGTGCTCCTACTGCCCCAGAGGATTCTCGACCAACCGTATCCTGGAGAACCACATCCGCACGCACACGGGCGAACGGCCATTCGAGTGCGACTACTGCCCCGCCTCCTTCACACAGAAACAGGCGATGCACTCACACACGCGCTCCATACACAAGATAACGgactttaaataa
Protein Sequence
MSNLMETGAVCRGCLATDRTLTSIENYYHIYHEILKDSVKVHHESEIPFMCWECTAHLRNFENFRHRVLEADLLLSDLSKGFQFKTLSTLTVLIKQNAIDVELSEDVKIETAPSNDCDGNVKIDIEVKEEPIDYKPTDDNDDYQEPIDFNEFFQNNDLVAENIKLDPDEDALTIVKKVEHKAKIQSKVKAEKKVQKKNYKIIFLNTNKEMSKSVRIDDNEMAYWMEQEKTRRGYIIRKYKCEMCITGFSQKKLYLRHIDNCHNESNNQFICGICTRRFHTKPNMVRHIRLHYTKYRCKSCEFECYRNYQMEQHLLSTHRRSVECLKCGLSFILLHHFYEHYRRLHKHVICDYCGKRKSKKSRLIAHIRRFHTAHRCELCNKPYKTFEGLVDHNKLHHVKSARELCYCVECNLQFDNVALYTRHISRSTKHKKKAGIPCPECNKVYDRRCTMTNHYNHVHLKKTKHYCEPCEKYFLNGYRLRRHKASVHDKVPPVKNKMCSYCPRGFSTNRILENHIRTHTGERPFECDYCPASFTQKQAMHSHTRSIHKITDFK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00404276;
90% Identity
iTF_00935192; iTF_00934232;
80% Identity
-