Basic Information

Insect: Polyommatus iphigenia
Gene Symbol: -
Assembly: GCA_963422495.1
Location: OY730190.1:24536868-24538745[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.031 2.9 9.5 3.1 1 23 13 35 13 35 0.98

2 15 2.1 2e+02 3.7 3.4 1 23 49 71 49 71 0.95

3 15 5.6e-05 0.0053 18.2 0.4 1 23 96 118 96 118 0.96

4 15 0.78 74 5.1 0.1 6 23 127 145 125 145 0.95

5 15 0.053 5 8.8 0.4 2 23 219 240 218 240 0.88

6 15 3.1 2.9e+02 3.2 2.0 1 23 245 268 245 268 0.93

7 15 0.00013 0.012 17.0 1.5 2 23 272 293 271 293 0.97

8 15 9.2e-06 0.00087 20.6 0.5 1 23 300 322 300 322 0.98

9 15 0.00012 0.011 17.2 5.0 1 23 328 350 328 350 0.97

10 15 4.2e-05 0.004 18.5 1.3 1 23 356 378 356 378 0.98

11 15 3.3e-06 0.00032 22.0 1.1 1 23 384 406 384 406 0.98

12 15 0.00024 0.023 16.1 3.0 3 23 418 439 416 439 0.91

13 15 9.9e-06 0.00094 20.5 5.8 1 23 444 467 444 467 0.98

14 15 0.00041 0.039 15.4 0.4 2 23 472 494 472 494 0.94

15 15 0.0095 0.9 11.1 1.6 2 20 499 517 498 519 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.031	2.9	9.5	3.1	1	23	13	35	13	35	0.98
2	15	2.1	2e+02	3.7	3.4	1	23	49	71	49	71	0.95
3	15	5.6e-05	0.0053	18.2	0.4	1	23	96	118	96	118	0.96
4	15	0.78	74	5.1	0.1	6	23	127	145	125	145	0.95
5	15	0.053	5	8.8	0.4	2	23	219	240	218	240	0.88
6	15	3.1	2.9e+02	3.2	2.0	1	23	245	268	245	268	0.93
7	15	0.00013	0.012	17.0	1.5	2	23	272	293	271	293	0.97
8	15	9.2e-06	0.00087	20.6	0.5	1	23	300	322	300	322	0.98
9	15	0.00012	0.011	17.2	5.0	1	23	328	350	328	350	0.97
10	15	4.2e-05	0.004	18.5	1.3	1	23	356	378	356	378	0.98
11	15	3.3e-06	0.00032	22.0	1.1	1	23	384	406	384	406	0.98
12	15	0.00024	0.023	16.1	3.0	3	23	418	439	416	439	0.91
13	15	9.9e-06	0.00094	20.5	5.8	1	23	444	467	444	467	0.98
14	15	0.00041	0.039	15.4	0.4	2	23	472	494	472	494	0.94
15	15	0.0095	0.9	11.1	1.6	2	20	499	517	498	519	0.92

Sequence Information

Coding Sequence: ATGGAGTCCATAGTGAAACTGGATAAGGAGAAGGTGTACTATTGCAGAATTTGCAACTTCAACAGTGTGCAACTGCATGACTATATGAAGCATATAACCACACATGTTCTCCAGAGCAAAGTTATTGTGTCACGAGATACATTTTACCATTGTGATAAGTGCCAATGTGCCTTTCTGACTGACAACGCTCTAAAACTACACAGAATGGGTCATGTTATCAAGGCTGTTAATGTGAAAAAGAAAAACCATGAGGCGAGATATCTTGATGAAAAATATGTTAAGCGCTACAATTGTAGTGAGTGTGACTACAAATTTGTACTGAAGAGTACGTTGGAAATGCATATGGAAGCACACAAACCATTGAATCATGTGTGCAGCTGTGGTATAGCTTATTACGAGAAAAAAGATCTTAACGGTCACATAAAATtagtacataaaaataaattaaacgaagctaaaacagaaaaaaagacaaaaatgcCTGCTGTAAAAGTAAAGATAGAATATGCAAGCGACCTTGACGAGTCTGAAAATAATTATGatctgaaaaagaaaaaagagaAGACTATTAAAAACATGTTTAAAATAGAAGTCGAAGTTGAAACGGAACAGCAAGTAAAATCTTATTATAAAAAGAATTCATTTGAAATAATTTCGTGTAATAATTGTGACCAGACATTTACTTTGATGGATATGAGAAAACATGTAGAAGAAATGCATGAAGATGTTCCATACTCGTGTAGATGCTGTTACTTGAGGTTTGCAACAAAAGAATTGGTGGAGGAGCATCGCAACAATATACACAGAACTAAAACTTGCAATATTTGTAGAAAGAAATTTATGACAAAGGCCTCATTAGATACGCATATGATAAGTCACAATCCCAATTCTAGACCATATGTTTGCACCATTTGCAAAAAAAGCTATGCACAACGAGCTAGTCTAAATGGTCACCTACAAAGACATAAGggagaaaaatattttgattgtaAAACCTGTAGTAAGAAATTTTATGACCGACATGCTTTGAAAAATCATGAAAGAACTCATACTGGTGTAAAGCCGTACGTCTGCCAGTACTGTAACAAACCCTTCAGTGACCGTTCAGCCCATATCAGACATGTCCGGATTCATACCAAAGAATACCGCTACTACTGTACCGAGTGCCCAGAAAAATTTACCGATGCTAGCTCAATGATAAGACACAAACGCAAGCATGATAAAGGACAATTAAACGATTTAAAGGTCAATTGTGACATTTGTGGAAAATCCATTAGCAGTAAACATAACCTTAAACACCATAAATTAGCAAAGCATACAGAGAAGATGTTTCAATGTCATCATTGTGGCCAAAAATTTTCAAACAAAGGGAATGTGTTTCTGCACATTAGAAGAAAGCACTCTGAAAGGCCCGAGTGTGCTTATTGCGGAAAAAAGGTTGAAAATAAAGAAGCTCTGCAGAGGCACAAAGACAAATATCATCCCATTATTTTGTACTGCAGTAGCTGCCCGAAAAAGTTTCACAGAGAAGATAGTTTTCAAAAGCACAAACTTGTGTGTTCTCTGAGAAACTCAGAGAAAAAAGATTAG
Protein Sequence: MESIVKLDKEKVYYCRICNFNSVQLHDYMKHITTHVLQSKVIVSRDTFYHCDKCQCAFLTDNALKLHRMGHVIKAVNVKKKNHEARYLDEKYVKRYNCSECDYKFVLKSTLEMHMEAHKPLNHVCSCGIAYYEKKDLNGHIKLVHKNKLNEAKTEKKTKMPAVKVKIEYASDLDESENNYDLKKKKEKTIKNMFKIEVEVETEQQVKSYYKKNSFEIISCNNCDQTFTLMDMRKHVEEMHEDVPYSCRCCYLRFATKELVEEHRNNIHRTKTCNICRKKFMTKASLDTHMISHNPNSRPYVCTICKKSYAQRASLNGHLQRHKGEKYFDCKTCSKKFYDRHALKNHERTHTGVKPYVCQYCNKPFSDRSAHIRHVRIHTKEYRYYCTECPEKFTDASSMIRHKRKHDKGQLNDLKVNCDICGKSISSKHNLKHHKLAKHTEKMFQCHHCGQKFSNKGNVFLHIRRKHSERPECAYCGKKVENKEALQRHKDKYHPIILYCSSCPKKFHREDSFQKHKLVCSLRNSEKKD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -